Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34662 LG10 13125025 13127322 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 13125039 5_prime_UTR_variant
G/A 13125041 5_prime_UTR_variant
T/C 13125071 5_prime_UTR_variant
A/T 13125076 5_prime_UTR_variant
T/A 13125124 intron_variant
T/G 13125178 intron_variant
G/A,* 13125336 5_prime_UTR_variant
A/C 13125406 intron_variant
T/C 13125411 intron_variant
G/A 13125441 intron_variant
A/G 13125577 synonymous_variant p.Ser49Ser
T/A 13125578 missense_variant p.Ser50Thr
G/A 13125599 missense_variant p.Ala57Thr
T/A 13125611 missense_variant p.Cys61Ser
G/T 13125612 missense_variant p.Cys61Phe
T/A 13125697 synonymous_variant p.Thr89Thr
G/A 13125731 missense_variant p.Ala101Thr
C/A 13125764 missense_variant p.His112Asn
T/C 13125767 missense_variant p.Phe113Leu
T/A 13126071 intron_variant
T/A 13126076 intron_variant
A/G 13126082 intron_variant
G/A 13126096 intron_variant
C/G 13126190 intron_variant
A/T 13126206 intron_variant
T/C 13126247 intron_variant
T/A 13126261 intron_variant
C/T 13126434 synonymous_variant p.Thr239Thr
A/G 13126523 missense_variant p.Glu269Gly
G/T 13126637 missense_variant p.Ser307Ile
G/T 13126705 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34662.1
MMEIASTNYLPELEMEYPTFLDQYQMDSFACPLDDFDFESFSGSPESNSSYRLNSEATLNCFPAQSSDQSFTPPRPTKRLKNTFNTFKTCAGDSIPHNVSASPSSQFISFGHFNASPRASQQFHNFHVKPKSENPSSEHMDFTDFVSQGSYQDKTFFSSDNRTNQVGLTTRNPIQAQEHVIAERKRREKLSQRFIALSAVLPGLKKMDKASVLGDAIKYVKQLRERVKNLEEKSAKTTTGSSVLVKRSILFADGENSDSHCANSLPEIEVRVSGKDVLIRTQSDKHSGRAAVILSELEKLQFIVQSSSLLPFGNNNIDVTIIAQMKENYMAAKDLLGRLRKALKQVDGA*


CDS Sequence:
>Vu_34662.1
ATGATGGAAATCGCGTCCACCAATTACTTGCCTGAACTTGAAATGGAGTATCCAACCTTTCTTGATCAGTACCAGATGGATTCTTTTGCATGCCCACTGGATGACTTTGACTTCGAGTCTTTCTCCGGATCCCCTGAGAGCAATTCATCTTATCGGCTAAACTCCGAAGCCACTCTAAATTGTTTCCCAGCTCAAAGTTCTGATCAGTCATTTACCCCTCCAAGACCAACCAAGAGGCTCAAGAACACATTCAATACCTTCAAAACTTGTGCGGGTGACTCAATTCCCCACAATGTTTCCGCTTCTCCTTCCTCCCAATTCATTTCTTTTGGCCACTTTAATGCTTCACCACGTGCTTCCCAGCAATTTCACAACTTCCATGTGAAGCCTAAAAGCGAAAACCCGTCCAGTGAGCACATGGACTTTACAGACTTCGTTTCTCAAGGTTCATATCAGGACAAAACTTTTTTCAGTTCTGATAATCGAACGAACCAGGTTGGCTTAACCACTAGGAACCCTATCCAAGCCCAAGAGCACGTAATAGCTGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAGGTTCATCGCTCTTTCTGCCGTCCTCCCTGGCCTCAAGAAGATGGACAAGGCTTCTGTGTTGGGAGATGCTATCAAGTATGTGAAACAACTACGAGAGCGCGTGAAAAATCTAGAGGAGAAATCAGCGAAGACCACAACCGGTTCTTCAGTCCTGGTGAAAAGATCTATTCTCTTTGCTGACGGTGAAAATTCTGACAGCCACTGCGCCAATTCACTCCCTGAAATCGAAGTAAGAGTTTCTGGGAAAGACGTGCTCATCAGAACTCAGAGCGATAAACACAGTGGGCGTGCGGCAGTGATACTCAGTGAATTAGAAAAGCTTCAGTTCATTGTCCAGAGTAGCAGCCTTTTGCCCTTCGGCAATAACAATATTGACGTAACTATTATTGCTCAGATGAAGGAAAACTACATGGCAGCAAAGGATCTCCTGGGAAGGTTACGAAAGGCTTTGAAGCAAGTTGATGGAGCCTAA


Promoter Sequence:
>Vu_34662::LG10:13123025-13125025(+)
TTTTTTTTACTTTTTTTATAATTTTTTTCTTTCTAATTTTTTCGTTAATGACAACTGTAGAGGCTTTGTGTGAGTATTTGTGAACATTTGAAAGCAAAATTGATGGTTGTTTACTGTACCAACAAGCTTACTATATATTATAATTTTCATCAAAACCAAGTTAAGGATTTACGAAAAGGATAAAAGGCTACATAGAAGTAGATATAGGTGAAATGAAATATTTATTGATACTTCTTTAAGTTATGATAAATTTTGATCCACTTAGGCATATTATAATATTTGATAATTATAAGATGATTGGAAACAAAGTTGAGATTCATTCGTCAGTAGGCTTACGCGAGCGATCATCGAATTCTGGTTTGAAAGTGATATACGAAAAGCAAACGTGTAAGCTTAGAATGAATCATTCAGAAAGACAACGAGGAGTGAATAAAAAAAAAGTATGATGCTAATGAATAATCATAAAATTAAGGAAGAAAAGTGATAGTGGGTGTTCAAACGATAATAAAAAAAATAGGGGAAAGACATGTTCTTATGATTATATTTTATTTGAGAGGAAAATTGTCTGCGTTTTCTTTCCAGTTTGATGGGAGTGGGAAGGAACAAAGGGTTGTAATAAAAGATATTTCATGTTAAACAATTTCTGACTTTGTTATCCGAACAGACTAAATTAAATACTTACTAATCATTTTTTCTTAAATTTAATCCTTTTTAATTTAACCATTTTATCATTCCAATTACTTCAAATATACTAACTTAGTGTGGTTTAGAAAGATACGTTAGAATTAGACTTTAAGTCTAACTCAATCCCACAAAATCAGTTTATAAGATCAGGTTTGCACCCACTTATAAACTATGAATTGGTCTTATTCTAATCGATGTGAAACTTACAACAAAATAATAAGATAAGTATTATAACTATTATATTTAGATATATTATTTTATTATAATTAATAATTGTAATTTAATTTATAAATGCTAATTATTTATGATAAAATATTATAATATATTTTCGTATTAAATTAATATAATACACAAAAATTATTTTTACAAATTATTCTTTATTTTAATTTTGATTTTAAAAGAAAATCAACCTGTCTCATTCCATAGTTGATCCGCTAATTTAACGGTTGAACCAATCAAAGTGACCTAATAAACTGAACTGTAACATAACTCACCAAATTAGAATAGATGAGACCAAAAGTTCAAGACCTATTTTGCGATATATTTTTATCATAGTTCTAAATTCTCTAAATTAAATCAAAAGATTTTTTTTTATGAATAATGGGAAACTCATGTCGTGTTTGTTTCCGTTTAAATGAAAATAAGAATTTAACTCAATTTTACAAAATTAGTTTTGTTTTTTTAAAAACTGGCTTGGAAGGTAAGGTTTACAACTCACTTATATATTATAAATTGGCTTTATTTCTAGTCGATGTAGGACTTCCAACACATTCCTTCACGTTCAGATATAGATATCTCATGCGTGATAGTAGAAATGGGTGATCAATAACAGCCCGGTGGATGAAATAGAAGAATAGAATATCCCGATAAAACTCGTTATATTAGACTCTATTCATGACTCTAGATAGCATATTAGAAACACGGTTACGTGGAATTAAGTTAGGCTAAAAAATAATCCTGCTAGCACAGTTTTCAGATGATATGAGAGGAAAATCTGTTGAAAGTTGTTTGTTTACGTCTTTTCTGCTTTCTCTGTTTTTCTCTTGAGTCCAAATACCGCTTTAAGTTCTGAATGATGCTGAAAATGTTGGAAAAGAGAGGAAGATGAACAAAATACATACGATGGAAACAAACAAGAACCCATAGTTTGACCAAATGTAAATGTGAGTGAAGACAGGGATCAGCCGCATTCAAAAGTCACCAACTGACCACCACAGAACATGGGATGCATTTTCACACGTGCTCCTATTGACCCGAGTATGAAGCGTGTGCGCTGCCCCCTTTATAAAACCTTCCCAACAACATCGTTTTTCTCA


Gene Sequence:
>Vu_34662(+)
ATCTCCCAACTTCACAGCCTTAATCTCTTCTCTTCAATCTCCACCCTCTCCACCGCTTTTCGAATTTTCCATTCAAGGTACCATATTTTCTCAATCTCTTCACTCTTTTATTTTCACTCATTATGATCTCCCCAACCCAAACTTTGCAAGATCTTTTCGCATTTTACTGATTAATGTTTCATTTATTACTTCTCCTCATCATTTTCATTCAACTCTACTGGGAAAGTTCATTTCTTGATTCTTCAATTATCTTCCGAAATAATTAATTGATGTCTTGTTGACTCTCTTTCAGGCCTCTATAAACGAAGGAAGCTGAAGATGATGGAAATCGCGTCCACCAATTACTTGCCTGAACTTGTAAGAAAATGCATAGGAACTCATAATAATTCACAAGCTTCTTAGCACATATAAGAAGAGAAAGTAATCTTACTTTGACTTTTGACAGGAAATGGAGTATCCAACCTTTCTTGATCAGTACCAGATGGATTCTTTTGCATGCCCACTGGATGACTTTGACTTCGAGTCTTTCTCCGGATCCCCTGAGAGCAATTCATCTTATCGGCTAAACTCCGAAGCCACTCTAAATTGTTTCCCAGCTCAAAGTTCTGATCAGTCATTTACCCCTCCAAGACCAACCAAGAGGCTCAAGAACACATTCAATACCTTCAAAACTTGTGCGGGTGACTCAATTCCCCACAATGTTTCCGCTTCTCCTTCCTCCCAATTCATTTCTTTTGGCCACTTTAATGCTTCACCACGTGCTTCCCAGCAATTTCACAACTTCCATGTGAAGCCTAAAAGCGAAAACCCGTCCAGTGAGCACATGGACTTTACAGACTTCGTTTCTCAAGGTTCATATCAGGACAAAACTTTTTTCAGTTCTGATAATCGAACGAACCAGGTTGGCTTAACCACTAGGAACCCTATCCAAGCCCAAGAGCACGTAATAGCTGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAGGTTCATCGCTCTTTCTGCCGTCCTCCCTGGCCTCAAGAAGGTACTCTCAGCTTAACAATTACTGTTCTTTTTTATCTAGCCTCAAAAGTTTTGGTCACTTAGGTTTACATCCTCATCAGGGCCATGCCATTACAAACCTTAGGTTCAGTGAACAAACTTTACCAGACCACCTGGCATACTACGTTAATTCAACTCTTATGCTAGATCCTATCTGATCAAATCACAGTTACAATTTATATATATAAAGAGCACTCACGGTTGAAGACTTAACCTATGTTAACAATAAATAAATGCTGAACTAAGTTATGTGTGTGGTTGCATGCACAGATGGACAAGGCTTCTGTGTTGGGAGATGCTATCAAGTATGTGAAACAACTACGAGAGCGCGTGAAAAATCTAGAGGAGAAATCAGCGAAGACCACAACCGGTTCTTCAGTCCTGGTGAAAAGATCTATTCTCTTTGCTGACGGTGAAAATTCTGACAGCCACTGCGCCAATTCACTCCCTGAAATCGAAGTAAGAGTTTCTGGGAAAGACGTGCTCATCAGAACTCAGAGCGATAAACACAGTGGGCGTGCGGCAGTGATACTCAGTGAATTAGAAAAGCTTCAGTTCATTGTCCAGAGTAGCAGCCTTTTGCCCTTCGGCAATAACAATATTGACGTAACTATTATTGCTCAGGTAAAAATTTATTTTGTAGTACTCGTGAACAATACTCATGCAATGCAAGTGTGGTTTAGTTAATCACCATTTCAGACTACATAATAGTCTCTCCTGGATACACCAAGACCAACATGGTATTTTTCTTTCCTGCAGATGAAGGAAAACTACATGGCAGCAAAGGATCTCCTGGGAAGGTTACGAAAGGCTTTGAAGCAAGTTGATGGAGCCTAACTGTTGAAGGAATTTATGTTTATGATGTTCATGATACAAGAATAAGTTTAGTGAACAATGATTTTAATCGCAGTGCTTTATTTTTCCTTTTTCATCCATGAAGTGGATTCTGGAGTTATATATGAAGGGCCTGCGGAGTAGTTTGCATAGTGTACATAGGTTTGTTCAGCTCTGAGTTGTGGGAATCTTGAACAGAAGCACACGGTGCCTAGGTTTCTTCTTCTGTTGCTTTTTGCGTAGTTGATTAATCGGCTATGTTACCCTACACCAGAATAGCATGTTCAGATCTTTGGTAGTTTTTTCAAGAGGGGTTTTTGAGAGGCTTGACTTACCATATAGACCTCTTTCTTGTCTTTTCTCAGCTTGTGAAAAAGGTTCTGGTTTGATAGATACTAAATATCAGACACGAATTTTAAATTT