Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34573 LG10 12327831 12330233 "G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3, partial "
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/G 12327870 missense_variant p.Leu680Phe
A/C 12327872 missense_variant p.Leu680Val
C/T 12327890 missense_variant p.Val674Met
C/A 12327898 missense_variant p.Gly671Val
C/T 12327915 synonymous_variant p.Gln665Gln
G/C 12327923 missense_variant p.Gln663Glu
C/T 12327963 synonymous_variant p.Leu649Leu
A/C 12327978 synonymous_variant p.Ser644Ser
A/G 12327996 synonymous_variant p.Asn638Asn
C/T 12328028 missense_variant p.Val628Met
G/T 12328060 missense_variant p.Ala617Glu
C/T 12328062 synonymous_variant p.Lys616Lys
C/G 12328065 missense_variant p.Glu615Asp
C/T 12328089 intron_variant
A/T 12328134 intron_variant
C/A 12328164 intron_variant
G/A 12328202 intron_variant
A/G 12328222 intron_variant
G/A 12328270 intron_variant
G/A 12328280 intron_variant
A/T 12328289 intron_variant
T/C 12328368 intron_variant
C/T 12328374 intron_variant
T/C 12328398 splice_region_variant&intron_variant
T/C 12328416 synonymous_variant p.Lys606Lys
G/A 12328449 synonymous_variant p.Gly595Gly
T/G 12328503 synonymous_variant p.Gly577Gly
G/C 12328621 missense_variant p.Ser538Cys
G/A 12328647 synonymous_variant p.Tyr529Tyr
G/C 12328753 missense_variant p.Pro494Arg
C/T 12328769 missense_variant p.Val489Ile
C/T 12328771 missense_variant p.Arg488Lys
C/A 12328776 synonymous_variant p.Val486Val
A/G 12328777 missense_variant p.Val486Ala
A/T 12328830 synonymous_variant p.Leu468Leu
T/A 12328836 synonymous_variant p.Leu466Leu
G/A 12328891 missense_variant p.Ser448Leu
G/A 12328899 synonymous_variant p.Pro445Pro
T/A 12328969 missense_variant p.His422Leu
T/G 12328972 missense_variant p.Gln421Pro
C/T 12328982 missense_variant p.Val418Ile
G/T 12328983 synonymous_variant p.Pro417Pro
G/C 12328985 missense_variant p.Pro417Ala
A/T 12328987 missense_variant p.Leu416Gln
G/C 12328988 missense_variant p.Leu416Val
T/G 12328991 missense_variant p.Lys415Gln
T/G 12329021 missense_variant p.Met405Leu
G/A 12329029 missense_variant p.Thr402Ile
C/T,G 12329037 synonymous_variant p.Gly399Gly
G/A 12329041 missense_variant p.Ser398Leu
A/C 12329042 missense_variant p.Ser398Ala
C/A,T 12329045 missense_variant p.Val397Phe
C/A,G 12329059 missense_variant p.Arg392Met
T/C 12329060 missense_variant p.Arg392Gly
C/T 12329079 synonymous_variant p.Gln385Gln
C/G 12329090 missense_variant p.Glu382Gln
T/C 12329095 missense_variant p.Lys380Arg
G/A 12329100 synonymous_variant p.Tyr378Tyr
T/C 12329119 missense_variant p.Tyr372Cys
A/G 12329120 missense_variant p.Tyr372His
C/A 12329126 missense_variant p.Gly370Trp
T/A 12329128 missense_variant p.Gln369Leu
G/A 12329131 missense_variant p.Pro368Leu
G/C 12329132 missense_variant p.Pro368Ala
C/T 12329174 missense_variant p.Glu354Lys
T/C 12329243 missense_variant p.Ser331Gly
C/T 12329244 synonymous_variant p.Pro330Pro
A/G 12329252 synonymous_variant p.Leu328Leu
A/G 12329316 synonymous_variant p.Tyr306Tyr
G/C 12329347 missense_variant p.Ala296Gly
A/G 12329448 synonymous_variant p.Phe262Phe
G/A 12329454 synonymous_variant p.Leu260Leu
G/A,C 12329458 missense_variant p.Thr259Met
C/T 12329478 synonymous_variant p.Glu252Glu
A/T 12329484 missense_variant p.Asp250Glu
C/T 12329486 missense_variant p.Asp250Asn
G/A 12329494 missense_variant p.Ser247Leu
G/T 12329496 synonymous_variant p.Ile246Ile
G/A 12329508 synonymous_variant p.Ser242Ser
G/A 12329522 stop_gained p.Gln238*
T/*,G 12329525 missense_variant p.Ile237Leu
A/C 12329532 synonymous_variant p.Gly234Gly
C/G 12329533 missense_variant p.Gly234Ala
C/T 12329549 missense_variant p.Val229Ile
C/T 12329560 missense_variant p.Gly225Glu
C/T 12329562 synonymous_variant p.Ser224Ser
C/T,* 12329580 synonymous_variant p.Thr218Thr
C/T,* 12329588 missense_variant p.Ala216Thr
C/T 12329609 missense_variant p.Val209Met
A/G 12329618 missense_variant p.Ser206Pro
T/G 12329623 missense_variant p.Tyr204Ser
A/C 12329629 missense_variant p.Leu202Arg
G/A 12329630 synonymous_variant p.Leu202Leu
G/T 12329633 missense_variant p.Pro201Thr
C/A 12329670 missense_variant p.Glu188Asp
T/C 12329673 synonymous_variant p.Lys187Lys
G/A 12329688 synonymous_variant p.Phe182Phe
G/A 12329698 missense_variant p.Thr179Ile
C/G,T 12329714 missense_variant p.Asp174His
T/C 12329717 missense_variant p.Thr173Ala
G/A 12329728 missense_variant p.Thr169Ile
A/T 12329730 synonymous_variant p.Leu168Leu
C/T 12329733 synonymous_variant p.Thr167Thr
T/C 12329745 synonymous_variant p.Gln163Gln
G/C,A 12329757 synonymous_variant p.Thr159Thr
A/T 12329760 synonymous_variant p.Pro158Pro
C/T 12329763 synonymous_variant p.Leu157Leu
C/T,A 12329769 synonymous_variant p.Thr155Thr
G/A 12329783 missense_variant p.His151Tyr
C/A 12329784 missense_variant p.Glu150Asp
C/G 12329807 missense_variant p.Glu143Gln
T/C 12329812 missense_variant p.Asn141Ser
C/G 12329814 synonymous_variant p.Gly140Gly
C/T 12329815 missense_variant p.Gly140Glu
A/G 12329817 synonymous_variant p.Thr139Thr
C/T 12329828 missense_variant p.Val136Ile
A/G 12329866 missense_variant p.Val123Ala
C/A,* 12329873 missense_variant p.Ala121Ser
G/A 12329881 missense_variant p.Ser118Leu
C/T 12329885 missense_variant p.Ala117Thr
T/C 12329889 missense_variant p.Ile115Met
C/T 12329903 missense_variant p.Glu111Lys
C/G 12329910 synonymous_variant p.Ser108Ser
A/T 12329912 missense_variant p.Ser108Thr
C/T 12329922 synonymous_variant p.Gly104Gly
G/A 12329926 missense_variant p.Ala103Val
C/A 12329928 synonymous_variant p.Ser102Ser
T/A 12329933 missense_variant p.Thr101Ser
G/C 12329939 missense_variant p.Arg99Gly
C/A 12329942 missense_variant p.Val98Phe
C/T 12329966 missense_variant p.Ala90Thr
C/A,T 12329981 missense_variant p.Ala85Ser
A/T 12329990 missense_variant p.Cys82Ser
G/A 12330018 synonymous_variant p.Asp72Asp
T/G 12330027 synonymous_variant p.Ile69Ile
C/T 12330035 missense_variant p.Val67Ile
G/A 12330044 synonymous_variant p.Leu64Leu
C/G 12330054 synonymous_variant p.Pro60Pro
G/A 12330061 missense_variant p.Thr58Met
C/G,T 12330077 missense_variant p.Ala53Pro
A/G 12330078 synonymous_variant p.Arg52Arg
A/C 12330102 synonymous_variant p.Ser44Ser
G/T 12330140 missense_variant p.Leu32Ile
T/C 12330174 synonymous_variant p.Leu20Leu
A/G 12330175 missense_variant p.Leu20Ser
A/G 12330187 missense_variant p.Phe16Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34573.1
MASLTLLIPTLICLQFHLLLLAFAEVNIGSTLSTDNNGVWRSPSGHFAFGFRALNNNTDPNTKLFMVAIWYDMIPDKTVVWCLKADNKLATAPAGSQVRITSAGLTLSGPEGDSIWASNLASVVSVGSMLDTGNFVLLTGNSEKVWQSFEHPTDTLLPTQSLQPEGTLTSRLTDTNYTTGRFQLYFKEGNVLLSPLAWPSPLLYDSYYVLDASGAASTLLFNESGNIYVNTTNGTIIQPQGSQWNISDLDPEVNYYRATLDFTGVFTQYYHPRNNTAQSGWRIMRYVPDNVCNAIAYQYGSGSCGYNSYCSMENQRPTCKCPYGYSLLDPSNQFGGCQPNFTLACGADVQTPPEELYEMHASQDFNFPQGDYERIQPYSKQECQQFCLQDCRCAMAVSGGDTCWMKRFPLGNGRKLPVTDQHVVYIKTRVVRDFYTGANGEPSPPPDSKIEHDSKLFLLGPLIGSLVLNSILFATVALFILKKQKVNRVSKAAPSPLETNLHSFTYENLKKATENFQEEIGRGSYGIVYKGQLEAGSSHVIAVKRLDRLVDEREKEFRTELSSIGRTCHKNLVRLIGFCDEGINRILVYEFMSNGSLADILFGKSKPRWNPGEEEKAVLTDWACDCFVEGRIDVLVENDEEALSDYVRLQKWVKIAIWCIHEQPQMRPTMGIVVQMLEGLVEVPNPPSLMRS*


CDS Sequence:
>Vu_34573.1
ATGGCTTCCTTAACCCTCCTTATACCAACACTTATCTGTCTTCAATTTCATCTTCTTTTATTAGCTTTTGCAGAAGTTAATATCGGTTCCACACTTTCCACCGACAACAATGGAGTGTGGCGTTCACCTTCTGGTCATTTTGCATTTGGGTTTCGTGCATTGAATAATAACACGGATCCGAATACAAAGCTGTTCATGGTTGCCATATGGTACGACATGATACCCGACAAGACCGTTGTTTGGTGTTTAAAAGCAGACAACAAACTTGCAACAGCACCAGCGGGATCACAGGTTCGGATTACTTCGGCGGGGCTAACACTGTCGGGTCCCGAAGGAGATTCCATATGGGCATCAAACCTGGCAAGTGTTGTCTCCGTAGGTTCTATGCTTGATACTGGCAACTTTGTTCTACTGACTGGGAACTCTGAAAAGGTGTGGCAAAGTTTTGAGCACCCCACCGACACGTTGTTGCCTACCCAATCTCTCCAACCTGAAGGCACGCTTACATCTCGATTAACAGACACTAATTACACGACTGGAAGGTTCCAACTTTATTTTAAAGAGGGTAATGTCTTACTGAGTCCTCTTGCATGGCCTTCTCCACTGCTTTACGACTCTTACTATGTGTTGGATGCCTCTGGTGCTGCTTCAACGTTACTGTTCAATGAGTCGGGGAATATCTACGTAAACACCACAAATGGTACTATAATCCAACCTCAAGGTTCCCAATGGAATATCTCGGATCTCGATCCTGAGGTGAATTACTACAGAGCAACGCTCGACTTTACTGGAGTTTTCACCCAGTATTATCATCCACGGAACAACACTGCTCAGTCAGGGTGGAGAATCATGAGGTATGTTCCTGACAACGTTTGCAATGCAATAGCTTATCAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAATCAGAGGCCTACCTGCAAATGCCCTTATGGGTATTCGCTGTTGGATCCGAGTAATCAATTTGGTGGATGCCAACCCAATTTCACCCTTGCTTGTGGAGCTGATGTTCAAACACCGCCAGAAGAACTATATGAAATGCATGCATCTCAAGATTTTAATTTTCCTCAGGGGGATTATGAAAGGATACAACCTTACTCTAAGCAGGAATGCCAGCAGTTTTGCCTGCAGGATTGCAGGTGTGCTATGGCCGTTTCAGGGGGCGATACTTGTTGGATGAAGAGATTTCCCCTTGGTAACGGTAGAAAACTACCCGTCACAGATCAACATGTTGTCTATATCAAAACAAGAGTTGTTCGCGACTTTTATACAGGTGCAAACGGGGAACCTTCTCCTCCCCCGGATTCAAAGATAGAACATGATTCTAAGCTGTTTCTTTTGGGGCCGCTAATTGGTTCTCTAGTCCTTAACAGTATTCTCTTTGCTACAGTTGCTTTGTTTATTCTCAAGAAGCAGAAAGTGAATAGGGTTTCCAAAGCCGCCCCTAGTCCTTTGGAAACGAATTTGCATTCGTTTACTTATGAAAATTTGAAAAAGGCCACAGAGAATTTTCAGGAGGAAATAGGCAGAGGTTCTTATGGCATTGTTTACAAAGGACAACTAGAAGCAGGTTCTTCTCATGTGATTGCTGTGAAGAGATTGGACAGATTGGTAGACGAACGAGAGAAAGAATTTAGGACTGAATTGAGTTCCATCGGTAGAACCTGCCACAAAAATCTGGTCAGGTTAATCGGATTTTGTGACGAGGGAATCAATAGAATACTGGTGTACGAGTTCATGAGCAACGGCAGTCTTGCAGACATCCTGTTTGGGAAATCCAAACCCAGATGGAATCCTGGGGAAGAAGAGAAGGCAGTGCTGACAGATTGGGCTTGTGATTGCTTTGTGGAAGGAAGAATAGATGTTCTTGTGGAGAATGATGAAGAGGCCTTATCTGACTATGTGAGGCTGCAAAAATGGGTGAAAATTGCAATATGGTGCATTCATGAGCAACCTCAGATGAGACCAACAATGGGGATTGTCGTGCAAATGCTCGAAGGCTTGGTTGAAGTTCCTAACCCACCATCTCTCATGCGTAGTTGA


Promoter Sequence:
>Vu_34573::LG10:12330233-12332233(-)
TAAGGAAAATTATTTATTATTTTTAAAATTATAAGAAAAATTCTATTTACTTTTAAAATTAGAAGGAAAATTCTTCATTATTTTTAAACCAACTCTAATCCTGTATTTTACAAGTAAAAAAATTAAACATAAATCTAATGATTATATACCAATAATATAATTACACCCGTACAAAAACAGCGTATAACGTCACACGTTCAACGTCCAACTATTGAAAAGCCAACGTTAAAAATGACCGATGACATTTTTGTAAATATAAGTGCAATTTAGACGTCAGATATAGACTTGTCCTACATCAATTGGTTATAAGACTTGAAAAGTTTGATGTCCTATTTGATATATTTTGCGAAAATATTTGGCGCAAAAGTGAAAATATACTTATGTATGACGTCGAATATCCTATAATTAAACGTCAAAAGGTTGTAAGACGTTGTTGAATGTCCTAGAATTAAACGTTATATGTTAGTGAGTTCAATAAAAATTTGAGCGGGAGGTTGAAAATTCATTCATTTTGTCATAGCGCGAGACTCTCTTCTTTGCTTAAACTTTTCTCGAATGAAGTTTGGCGACTAGCACATGAAATCTTTCTTTTTATACAAATGTATGTTGATTAACTACTTTATATATCATTTTCGTTTGTTTTGACCGATTGTTTTGGTGTTCTTCTTCATAGGTGTGTTATGGTTTCTCTCTCAATTGCATCAAACTTTATTTCGACGAATCCACTCTCAAGAAGTTTAGTTTTCGTTTTCAAGAACTTGTTTGTTGTATTGTTGAATTTGTTTAGGGTTTGTTTTTGTTTTTGTTTTCGTTTTCATACTACACTACACGTTATACATTGTCATAGCTTTTGTGTTTTTGTTTATAGTTCATTTTTCATAGTTCATGCTGTATAAAATACCAAAACCTAGATTACATTTGTTGTTTTTCTGTTTTTCAAGTATCATGGAATTATAAAATGTATTACAATTAATTAAAAAAAAACAAAAAAAGTTTATTAACGTCGTATAATGACAAAATTCGACATTAATTGATGTTAATTGACGTCGGACTAAAGCAATATCTGACATCATTTTGCTCTATGTTAGACGTTAGATATTCTCTATTGTCAAAGTCAATTAACATCATTTTTTAAATCTGACGTCAATTTAACGTCTTCTGATATAACGTCGGTATTTTTTTAGACGTTAAAAACCAAAAAACAAAGACGTCAAAACCTTTTTTTTTTTCACTAGTGTTAAGGTTGGTTTAAAAATAATGAAAGAAATATTAAATAAAAAATAAATTTAGTCTCAATTTAGAAAGATAGATAATTGAGACTAATTGAATAAAATTAATAAAAATTGTAATTAAATTAAACAAGATTATCAAAAATTAAGACTACATTAAATATAAGATATTGATCGTGACCCCAACACTAACTTGATACATGACGTTGACTTAACAAGTAAACAAGTTTTTTTAAATTAATAAAAAATTTAAAAATCACTGACACACGGTTAATCTACCATTATACGATTAATCTTACATTATCCATCTAAATGTGGTTACGCAAAAAACCAAATTAATGAAAATTAAATCTTTATTAAATATTAAAAATAATAATAATTAAATAAAATAAAATAGATAAGAACCAATATATTTTCTAAAACAAAAACATCAAGAATGGAAACAAATCCACAAAAGTTCCTAAGTTTTATAATTAGGATACGGATCATAAGATTAAAATAAAATAAAAATTCCAAAAAGTCATATGATTTCATAACATTTCAAGCACGTGTGAAAACATTAGAATTGTATTATAAGAATTTAGAATGATAAAAGGGTTATTGAAATTAATGGAACTCTTGTACAGTTTTTAGGACTCTGGCCACCTTACCCTCATCTTCCATGTGTTTTCCAGAACGAAGACTTTGTCAAGCAGATGGCTTTTATAAGTCATCGACAAAATAACTACTCATTAACATCTCTATTGTTCTATCTTTGTGGTAATTCAAACA


Gene Sequence:
>Vu_34573(-)
ATGGCTTCCTTAACCCTCCTTATACCAACACTTATCTGTCTTCAATTTCATCTTCTTTTATTAGCTTTTGCAGAAGTTAATATCGGTTCCACACTTTCCACCGACAACAATGGAGTGTGGCGTTCACCTTCTGGTCATTTTGCATTTGGGTTTCGTGCATTGAATAATAACACGGATCCGAATACAAAGCTGTTCATGGTTGCCATATGGTACGACATGATACCCGACAAGACCGTTGTTTGGTGTTTAAAAGCAGACAACAAACTTGCAACAGCACCAGCGGGATCACAGGTTCGGATTACTTCGGCGGGGCTAACACTGTCGGGTCCCGAAGGAGATTCCATATGGGCATCAAACCTGGCAAGTGTTGTCTCCGTAGGTTCTATGCTTGATACTGGCAACTTTGTTCTACTGACTGGGAACTCTGAAAAGGTGTGGCAAAGTTTTGAGCACCCCACCGACACGTTGTTGCCTACCCAATCTCTCCAACCTGAAGGCACGCTTACATCTCGATTAACAGACACTAATTACACGACTGGAAGGTTCCAACTTTATTTTAAAGAGGGTAATGTCTTACTGAGTCCTCTTGCATGGCCTTCTCCACTGCTTTACGACTCTTACTATGTGTTGGATGCCTCTGGTGCTGCTTCAACGTTACTGTTCAATGAGTCGGGGAATATCTACGTAAACACCACAAATGGTACTATAATCCAACCTCAAGGTTCCCAATGGAATATCTCGGATCTCGATCCTGAGGTGAATTACTACAGAGCAACGCTCGACTTTACTGGAGTTTTCACCCAGTATTATCATCCACGGAACAACACTGCTCAGTCAGGGTGGAGAATCATGAGGTATGTTCCTGACAACGTTTGCAATGCAATAGCTTATCAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAATCAGAGGCCTACCTGCAAATGCCCTTATGGGTATTCGCTGTTGGATCCGAGTAATCAATTTGGTGGATGCCAACCCAATTTCACCCTTGCTTGTGGAGCTGATGTTCAAACACCGCCAGAAGAACTATATGAAATGCATGCATCTCAAGATTTTAATTTTCCTCAGGGGGATTATGAAAGGATACAACCTTACTCTAAGCAGGAATGCCAGCAGTTTTGCCTGCAGGATTGCAGGTGTGCTATGGCCGTTTCAGGGGGCGATACTTGTTGGATGAAGAGATTTCCCCTTGGTAACGGTAGAAAACTACCCGTCACAGATCAACATGTTGTCTATATCAAAACAAGAGTTGTTCGCGACTTTTATACAGGTGCAAACGGGGAACCTTCTCCTCCCCCGGATTCAAAGATAGAACATGATTCTAAGCTGTTTCTTTTGGGGCCGCTAATTGGTTCTCTAGTCCTTAACAGTATTCTCTTTGCTACAGTTGCTTTGTTTATTCTCAAGAAGCAGAAAGTGAATAGGGTTTCCAAAGCCGCCCCTAGTCCTTTGGAAACGAATTTGCATTCGTTTACTTATGAAAATTTGAAAAAGGCCACAGAGAATTTTCAGGAGGAAATAGGCAGAGGTTCTTATGGCATTGTTTACAAAGGACAACTAGAAGCAGGTTCTTCTCATGTGATTGCTGTGAAGAGATTGGACAGATTGGTAGACGAACGAGAGAAAGAATTTAGGACTGAATTGAGTTCCATCGGTAGAACCTGCCACAAAAATCTGGTCAGGTTAATCGGATTTTGTGACGAGGGAATCAATAGAATACTGGTGTACGAGTTCATGAGCAACGGCAGTCTTGCAGACATCCTGTTTGGGAAATCCAAACCCAGATGGAATGTAAGAGTTGGATTTGCTTTGGGGATTGCGAGAGGATTGGTATACTTGCACGAAGAGTGTGAGACTCCCATTATTCATTGTGATATAAAACCTCAAAATATACTGATAGACGAGTATTTCAATCCAAAGATATCAGACTTTGGGTTGGCCAAGTTGTTGCTGTCTGAGCAAAGTAGAACGATCACAATGATCCGAGGAACACGAGGATACGTGGCTCCTGAATGGTTTAAGAATGTTGCGGTGACGGTTAAAGTGGATGTTTACAGCTTTGGTGTAATGCTGTTGGAAATAATTTGCAGCAGAAGAAGTGTGTTGATGATGGAGCCTGGGGAAGAAGAGAAGGCAGTGCTGACAGATTGGGCTTGTGATTGCTTTGTGGAAGGAAGAATAGATGTTCTTGTGGAGAATGATGAAGAGGCCTTATCTGACTATGTGAGGCTGCAAAAATGGGTGAAAATTGCAATATGGTGCATTCATGAGCAACCTCAGATGAGACCAACAATGGGGATTGTCGTGCAAATGCTCGAAGGCTTGGTTGAAGTTCCTAACCCACCATCTCTCATGCGTAGTTGA