Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34559 LG10 12224686 12225401 PREDICTED: transcription factor MYB114-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
T/C 12224811 stop_retained_variant p.Ter137Ter
T/C 12224826 missense_variant p.Ile132Met
T/G 12224841 missense_variant p.Gln127His
C/A 12224845 missense_variant p.Arg126Leu
G/A 12224861 missense_variant p.Leu121Phe
T/C 12224885 missense_variant p.Ile113Val
C/T 12225014 intron_variant
G/A 12225169 synonymous_variant p.Leu48Leu
T/A 12225190 splice_acceptor_variant&intron_variant
G/C 12225213 downstream_gene_variant
T/C 12225333 synonymous_variant p.Gln23Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34559.1
MASPKKTNSRGAWTAEEDQRLAQCIEIHGAKRWKTIAVKSGLNRCGKSCRLRWLNYLRPNIKRGNISVEEEDLIIRLHKLLGNRWALIAKRLPGRTDNEIKNYWNTCLCKKVNHHKKVKPETSMAQPTNSTQNTEEKVTVEHKVATDDGNGYSEVNFDFNEFFNFSIEGLYSFDWFRSS*


CDS Sequence:
>Vu_34559.1
ATGGCATCCCCCAAGAAAACTAACAGCAGAGGAGCATGGACCGCGGAGGAAGATCAGAGACTAGCTCAATGCATTGAAATTCACGGTGCAAAGAGGTGGAAAACTATTGCAGTTAAATCAGGACTAAACAGATGTGGAAAAAGCTGCAGGTTGAGATGGTTAAACTATCTGAGACCCAATATCAAGAGGGGCAACATATCAGTTGAAGAAGAAGATTTGATTATTAGGCTTCACAAACTGCTAGGAAACAGGTGGGCATTGATAGCTAAGAGACTTCCAGGGCGAACAGACAATGAAATAAAGAACTACTGGAATACTTGTTTGTGCAAAAAAGTTAATCATCACAAAAAGGTGAAACCAGAAACTTCAATGGCGCAACCGACAAATTCGACTCAGAATACCGAGGAAAAAGTAACAGTAGAGCATAAAGTAGCCACTGATGATGGAAATGGATACTCAGAAGTTAACTTTGATTTCAACGAATTCTTCAATTTCTCCATTGAAGGACTCTATTCGTTCGATTGGTTCAGGAGTTCTTAA


Promoter Sequence:
>Vu_34559::LG10:12225401-12227401(-)
TGGTATGAAAAGTAGGATGGTCATACTCTTGTTAAAAAAAGTAACCATTTAACAAATAAATACATTCATATTTTAGTTATATTTTTTCTCAACATAAATAGTAATGTATATTATTATATTATTATATTATTAAAATTATGTGAAAGTGGATTTTTTAGAGGGTATCAAGCTATCATTTTTCTTAAAAGTAGATCACTTTTGCTCTCCCTTCTGTGTTTTCTTTTTTTATCTTCGCCTTTTTTCTTCTTTTTTCTAATATGGTCAATGACCCAACAACCGTTGACCTTACTATTTTCCACTATATTCTTGTGTTTTCTTATTAATTCTGGTTTATTAGACAATACGAAGGATAAGTGCTAGAAATTACACCATTTTCCACTACGTTGCAAGAAAAATACAGTAATTCACGAATTTATGTATTCATTAGACTAGTCTTACATTACATTAAAACAACTATATATTTAATTTATGAAAATATATTTTCTACATCTATTTAAACTTAGTCCAAGATAGAAAATACTTTCTGATTACCAAATGTAATTAATGTAAAACCTCTCCAAGAAATAACCATTTTACTTTTTCCCTCCAAATCCTCCTCCCTTTCCGAAAACCAGCAATCTACTTTAACCCAATAATATACAATAGATAATGTAATTATTGTATTAACAGCAAGATGTATGTAGTTTTCTTGCTGGAAAACGGTGTAATTTGTAGCACTTATACTTCGTATTATCTAATAAGCCATAATTAATAGGAAAACACAAGAGGTATCTTTCTTAATCCACCACTTTAGTTTTCACCATCTGGGTGCATATAGTAAGGTCAACTGTTGTTGGGTGACCATGTCAGAAAAAGGAAGAAGAAAAAGGGCAAAGATAAAAAGAACACAGAAAGAAAGGAGAGCAAAAGTGAACTATTTTTAAGAAAAATGATAGCTTGATACCCTCTTAAAAAACCACTTTCACATCTCATTTTAATAATTTGATATATGTTACTATTTTAAGTTAAAAGAAAAAATATAATTAAAATATTAATGTATTTATTCGTTAAGTAGTTACTTTCTTTAATAAGAATATCCTCATCCCACTTTTCATGCAATACATATTAAAGTAAAACGAACTCATTTCATATATATATATATATATATATATATATATATATATATATATATATATATATATTTACTTCATCATTAGTTGTTTTACTTTTGAAATGTCTTAAAGAGATGATGAGGTGGGGTGGGAAGAAGAATTGAAATGAGACCAGAACAGTGCATTGGAAGCCAATAGAACCTGCGAAGTACAAATTCCTTTTTCAACATAGAAACTTGTGTTCTTACTGTTCAAACGTTTGTTTAAAGCTGCTATCATGCATGTTGCTGGATTCCCACTCCCTCGATATGGACAAAGCCACTAATTATTGTTATATGAGACCAATCTTAGAAAACATTCAACTTTTTTGACAACATAGGATACAAACAGAAGAGGAGATCAAACTACGAATGATCCGAAATAAAACATGTGTCATACCTCTTATTTTTCCTCCAACTTATACCTTTTTGACAATTAGCTTCTTCAGAAAGTTTATCTTTCATTAAATACACTAATTTAGATGAAGTAATAATAACCATTATCTATGTTTGAATATATAACCCTAAAATGTTGTCATGCAAAGGATTGTCTTCCCCTTCAGTCCACAAACAGAAGAAAGAGAGAAAAAGAAACCCGAAAATATCATTGGTTGTTTGAGAAAAATACAGTATCAAGTGGAGAATCAAAAGACATTATTGTACTTTTCATTCTTGAACCGACAACAGTAGTGGCGCCTCGTACTTAAAGCATTGGTATCTCATTTTGAACCCCGAATGAGTGACGAACAATGATGAACCCATTGAACGTTCAAGCCTACAACTTCAATCAATCAATGGCCAGACTCTCCCATAAATAATGTCATAACCAAACGCTTTTCACAGTTCAAGGGTTTATCCCTCTCATATATGC


Gene Sequence:
>Vu_34559(-)
ATGGCATCCCCCAAGAAAACTAACAGCAGAGGAGCATGGACCGCGGAGGAAGATCAGAGACTAGCTCAATGCATTGAAATTCACGGTGCAAAGAGGTGGAAAACTATTGCAGTTAAATCAGGTTAATCATGTATCTTTGGAAAAAATTACTTTGACTTGCATGCATTAATCCTTCTTGACATGCATGTCTTTCCTTCCATATGTTAACAGGACTAAACAGATGTGGAAAAAGCTGCAGGTTGAGATGGTTAAACTATCTGAGACCCAATATCAAGAGGGGCAACATATCAGTTGAAGAAGAAGATTTGATTATTAGGCTTCACAAACTGCTAGGAAACAGGTTTTTGTCGTATTAAAAACCTAGGATATTTAATATTTTATGTTGTTGACTATGAACATATTTATGGATATATTATTGTTTGTGAAGGTGGGCATTGATAGCTAAGAGACTTCCAGGGCGAACAGACAATGAAATAAAGAACTACTGGAATACTTGTTTGTGCAAAAAAGTTAATCATCACAAAAAGGTGAAACCAGAAACTTCAATGGCGCAACCGACAAATTCGACTCAGAATACCGAGGAAAAAGTAACAGTAGAGCATAAAGTAGCCACTGATGATGGAAATGGATACTCAGAAGTTAACTTTGATTTCAACGAATTCTTCAATTTCTCCATTGAAGGACTCTATTCGTTCGATTGGTTCAGGAGTTCTTAA