Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34419 LG10 11066991 11067970 PREDICTED: probable WRKY transcription factor 29
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
A/T 11067005 stop_gained p.Cys223*
C/T 11067006 missense_variant p.Cys223Tyr
G/A 11067022 missense_variant p.Leu218Phe
G/A 11067053 synonymous_variant p.Ser207Ser
T/C 11067077 synonymous_variant p.Pro199Pro
G/C 11067143 missense_variant p.Asp177Glu
C/A 11067243 missense_variant p.Arg144Leu
G/A 11067313 missense_variant p.Arg121Trp
T/C 11067334 missense_variant p.Arg114Gly
C/T 11067379 upstream_gene_variant
A/T 11067521 synonymous_variant p.Ile79Ile
T/A 11067523 missense_variant p.Ile79Phe
G/C 11067613 missense_variant p.His49Asp
C/A 11067663 missense_variant p.Ser32Ile
C/A 11067684 missense_variant p.Cys25Phe
A/T 11067685 missense_variant p.Cys25Ser
T/A 11067879 upstream_gene_variant
T/C 11067946 splice_region_variant&intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34419.1
MDNLHQKLEELARGMAWDLHAIVGCTIAPATSMDNPNLILSQHFCAEQHDLLCNFQEFSETKTVLDELEEIYKPFYPQIRNSSIISSSQPVPDKTVKKLKPSNTAVSKCRKSKKKLKSKRAVKHMTAADGVSDPWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKHVERSHLDPGLFIVTYTAEHSPHQARKNSTSTIAPPPTTKRHGLKVSLSFSPNFLLFNLQ*


CDS Sequence:
>Vu_34419.1
ATGGACAATCTTCATCAAAAGTTGGAAGAACTTGCACGCGGGATGGCTTGGGATTTGCATGCTATTGTGGGATGTACAATTGCCCCAGCCACCAGTATGGACAACCCGAATCTCATTCTTTCTCAACATTTTTGTGCTGAACAACATGACCTACTTTGCAATTTTCAGGAATTCTCAGAAACCAAAACGGTGCTTGATGAATTGGAAGAGATTTATAAACCTTTCTACCCCCAAATTCGTAACAGTTCCATCATTTCAAGTTCCCAACCCGTCCCTGATAAAACTGTCAAAAAACTCAAACCATCAAACACCGCAGTCTCTAAATGCAGAAAAAGCAAGAAGAAGCTGAAGAGCAAGAGGGCGGTGAAGCATATGACAGCTGCAGATGGTGTGTCAGACCCATGGGCATGGCGTAAATATGGACAGAAACCGATAAAGGGATCACCATATCCACGTAGCTATTATAGATGCAGCAGCTCCAAAGGATGTTTGGCTAGGAAACACGTGGAACGTAGCCATTTGGATCCCGGACTTTTCATAGTTACCTACACCGCAGAACACAGCCCTCACCAAGCTCGAAAAAACTCAACTTCCACCATTGCACCTCCTCCAACAACGAAGCGACATGGCTTAAAAGTTTCCCTATCATTTTCTCCAAACTTTCTTTTGTTTAATCTACAGTAA


Promoter Sequence:
>Vu_34419::LG10:11067970-11069970(-)
GCAACTTGTAGAAGAGTTCCCTCTGCGTGACCCGCTTTTCCTGAAGCAATATCTGATAGCACATCTCCATCACCTTCCACACTGCAAGTCAAAGATTAAATTTATATCTCAAACACAAAAAATATTGGAAAGAAAAGAACAAGAAAAATGAAAAACTACATTCGTAATCCGTACCCCTAACGAAGGCCTTTGCTGCATTAGGTCTCATCAGAGACCTTGTGGATATGGAATTGGAGAGAAAAACACGTGAAAGTTCTGTCAAAAGGCCATGATTCACTCGACTATTGCTATATTTCCTCTGAATCTGTTTGTTTCTTAGGATTATTAAGATAAATTTGAAATACATTCATATTTGTTTTCTGATAGCAAATAACTAAGAACAAGATAACAGTGACAAGAACAAGGCAAACTAGTGTTTAAAAGTTTATTCAAGTGAAACAGAGAGATTATTGCTTATGATTAATCGAAATTGTACCAAAGGCAAATCTGAGATGGCAGGGTTTGATGCATTTAATATTTTGAGAAAATTGAGGACAGAAACTTCAATTCTCGCTCGAACCTGCACGCGTCAAAACGGAACTGGCACGATCAAGATCAACAGAAAAACGAAATCGGATGGATTGTGAAAGAGTATTATTACCTGAGCAGGAGGGACGATATCGGCATTACAGAGCTCTTGATCGGAGAAGAATTTTAGAGCCGAATTTTGAAGATCTTCCATGGGAGCGTGAAATTTTCAGAATTCCATAACTGTATAATTGGCGCGCAATGCCTGAATAAGATAGTTTTGTGTCAAACACAACAATTTTATGTCGCTTAACTACACATATAACAGACATTTTAGAGAAAATAATATATTTTATTTTACTAATTGCTAGTAAATTTCCTTAACAATCTATGTTTATTTTTTATGTATTTTTGTTAAAATACCTTAGAACTAGCACGTGGTGTTTTAAGTTCTCATATGTATGGTTTTAACTCCATTTTTTTACTTTGTTTAGGCAATTTAATTCCTAGTATCCCTGGTTTCTTTCTCATTTAAGCTTATTTTCTGTTCGTGACCTTGCTTGATGGTAATTAACGTAAATATGATCTTTTTCATTGTTAAAATATTGGGATTTTTTTTCATAGGGATAATTGGGGAGATTTATTATATATAGGTGTAAGTTGTCTATAATAAAAGTATGATATCACATACTAATGAGATTTTTGTACTCGGAATACATTTTGGAGATTTTTACCGAGATATTGTTTATATAAATTTTTTGTAAATATTTTCAATAAAAAAAAAAACTTTAAAAATTGATGTTTGTGAGTTTTTTTTATACATCACTTCAATTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAACAATAATAGAATAAAAGTGACAAAATTTTATTTGATAAAAAAATTGCAACTATATAATATACAACATATATATTAAAAACATCACATTTAATCCAAAGTTCTTGAAATATTATATTTATAATTTGTTATCTACGTGTCAACATTATCATATTTACTAAATCTGAGATTTTGAACTTCTTAATAGTATTATAACAAAGTTTTATATATATTTATAGTAATCATAGATGAAATGAAGTTTGAATTTAAAATTGATGTTATCCAAACAATCTAAGATTCTCTTGGAAATAATTTAATGAAGAAAATATAAATACTTAAATGATTTTTATTTAACAGTCAATAAAAATGATAGAATAATTCTTTTAGTTTCAAAAATTACTAAAAAATAGAATTGGAACAAAAATTATATAAAAACAAATATACAAAAGGAAGAATCTGTCATTGTTCAAATAAGAAAAAGAAAAAAGAGTGCGCGCATCAATCGTTTTTCTTCCTTGTCGGCCCGCTGTTGTTTGTATAGGGTAACGGCAAGATTGATTCCATAGTCTTGTACATGCGTGCTCACACACGACACATCTTTCTGATTTCACA


Gene Sequence:
>Vu_34419(-)
ATGGACAATCTTCATCAAAAGGTGATTCTTGCATCGAATTGCAGGAAAATAACAAAATCTTGTTTGAACTTTGAAGCAAATTAAAGCCTTGAAGCACAAAGTCACAATGATTATAGATAGCCAAACCTTGGTTGACATTTCTCCTATTTTCCTTGTAATTTCATCTTTGACTAAAACTCATCTCTATCTCTCCATCTCTATTTCTACGTTTTCCTATTTATATGCGATCTGCAGTTGGAAGAACTTGCACGCGGGATGGCTTGGGATTTGCATGCTATTGTGGGATGTACAATTGCCCCAGCCACCAGTATGGACAACCCGAATCTCATTCTTTCTCAACATTTTTGTGCTGAACAACATGACCTACTTTGCAATTTTCAGGAATTCTCAGAAACCAAAACGGTGCTTGATGAATTGGAAGAGATTTATAAACCTTTCTACCCCCAAATTCGTAACAGTTCCATCATTTCAAGTTCCCAACCCGTCCCTGATAAAACTGTCAAAAAACTCAAACCATCAAACACCGCAGTCTCTAAATGCAGAAAAAGGTAAGCCATTCATCAAACTATACATAAATAATTTTGCTTCGTTGCATCAGAAGTCAACATGTTTATCACTGTTAATTTATCAGCAAGAAGAAGCTGAAGAGCAAGAGGGCGGTGAAGCATATGACAGCTGCAGATGGTGTGTCAGACCCATGGGCATGGCGTAAATATGGACAGAAACCGATAAAGGGATCACCATATCCACGTAGCTATTATAGATGCAGCAGCTCCAAAGGATGTTTGGCTAGGAAACACGTGGAACGTAGCCATTTGGATCCCGGACTTTTCATAGTTACCTACACCGCAGAACACAGCCCTCACCAAGCTCGAAAAAACTCAACTTCCACCATTGCACCTCCTCCAACAACGAAGCGACATGGCTTAAAAGTTTCCCTATCATTTTCTCCAAACTTTCTTTTGTTTAATCTACAGTAA