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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34388 LG10 10839178 10840404 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 10839379 missense_variant p.Thr68Ser
C/T 10840149 missense_variant p.Pro268Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34388.1
MESEKSWEQKALVSELIQGLQIAIKLKENFNIPSSIHARDSLLQSILSSYDKALLILKQNAPFSNSETMHQPTQTSSPQFPPKDHYEGALKDHQQLKQNSKKRKKMPKWTEQVRVKIQNGVEEPLQDDYSWRKYGQKNILNAKYPRSYYRCTFQKSKGCFATKQVQRSEEDPNVFDISYRGSHVCSQGNDAVLSLKLADTEEKSQGCDSDVHHAQSSRERVTNYTNTLTVETDNMTPHPFPSFGCMPQDNHHTFLPSFVLENDPFCSTVSQTSFFSPNTPESNYLVSPSFHLHDELDRVFDKPCPDSDAAGIVLADASTINSPNFDFNFSLDAVGIGANCPSMPGGFHPKCT*


CDS Sequence:
>Vu_34388.1
ATGGAAAGTGAAAAGAGTTGGGAGCAGAAAGCTCTCGTGAGTGAGCTAATTCAGGGGTTGCAGATAGCAATAAAGTTGAAGGAAAACTTCAATATACCCTCTTCGATTCACGCTAGGGACTCACTACTGCAGAGTATATTGTCTTCTTACGACAAGGCTTTGCTTATTCTGAAACAAAATGCACCATTTTCAAATTCAGAAACCATGCATCAACCAACTCAAACTTCCTCACCACAGTTTCCTCCCAAAGATCACTACGAAGGTGCCCTCAAGGATCATCAACAACTTAAACAAAATTCAAAGAAAAGAAAGAAGATGCCCAAATGGACGGAACAGGTTAGAGTGAAGATCCAGAATGGGGTTGAAGAACCTCTGCAAGATGATTACAGCTGGAGAAAATATGGACAGAAAAACATCCTCAATGCAAAATATCCCAGAAGCTACTACAGGTGCACATTCCAAAAATCTAAGGGCTGCTTCGCCACCAAGCAAGTGCAGAGATCAGAAGAAGACCCCAATGTCTTTGACATAAGTTACCGAGGAAGCCACGTCTGTTCTCAGGGAAACGATGCCGTTCTGTCATTAAAGTTAGCAGACACAGAAGAGAAATCGCAAGGTTGTGACAGTGACGTTCATCATGCACAGTCATCGCGAGAAAGAGTTACAAACTACACAAACACGTTGACTGTGGAAACGGATAACATGACGCCACATCCATTCCCTTCGTTTGGATGCATGCCACAAGATAACCACCACACGTTTCTTCCTTCCTTCGTACTGGAGAATGATCCCTTTTGCAGCACCGTTTCCCAAACATCCTTCTTCTCTCCGAACACACCTGAATCAAATTATCTTGTGTCTCCGTCTTTCCATTTACATGATGAACTCGACAGGGTCTTTGACAAGCCGTGCCCTGATTCTGATGCTGCCGGGATCGTTTTAGCTGATGCATCAACCATCAATTCTCCAAATTTTGACTTCAATTTCTCACTCGATGCAGTGGGAATTGGTGCAAATTGCCCTTCAATGCCTGGGGGTTTTCATCCTAAGTGCACTTGA


Promoter Sequence:
>Vu_34388::LG10:10837178-10839178(+)
AATAGATAAAAAATGAAGTATGTAAGAATTTTATCACCATCAAACTAGAATAAAGTACATGATTTAAAACAAATACGAAGATGAATACAATAATATTAATAAAAATTATTAAAACCAAATGATCGCTAAATTATGAAAATATTCAATAAAACAAGATGCACATCAAGGATGTTTACCTTACCTTAAGAAAAGAATTACAAGTTGAATAAAATATTTGACTATAAATGGGATTGGGAAAACCAAAATAAACACTCAGATTAGACAAATCAGAGATTGAAATTAGTGTGGAAAGTTGACAAAAGTATTAAAGGAAAATTGCACTAAAGAGACAATGTTTCAAAGGTTGTCTTCAAAAGAAAAAAACATTAATGTCCATGAATAGATTGGTCAACATGGAGTTCTTAAATTCAAAAACATGTGAAGTAAAAGGAATCACAAGAGAAGAATTTGGATGGCTTAGCAAGATAGCAAATATCAGAAATCTTGTTTTCTGTAAATGGTTGATGTGTCATCCACAAAAGAATTAACTTGGTTTGCTTTTTGGAGGGTTACATTGAACTTTGTCTTGTTTGTGTCTGGTAATTTTCACATGGCTAAAATTTGTCCAATGCTTTCAAAAAGCAACTCACATGTTTACAAATCTTATACGCACTAACTATTTTCATCAAATCATAATTACATCTCACTGTGCATAGAAAAATCCATTTATTCGTATAGGTAAAAAAACCGATTAGAGGCAGCAAATCCTATCTCTTCTTATGATCTCTTATTTTGTTTGGTTTGAGTTTCATTAATATGGTTGAAACTTCAATAAATTTTTCTCTTAAAAAATTTATCAATAATATCAGAATTGATGATTAGTTTTAGTAACAATTCCAAACGAGTAGTGAAAATTATTACTAATAAATATACTTTACTCCTCAATTCTCTTTGTTGTAATTTTCTATCATTTTAACATGTTTTTTTTTTAGTATTTTCAGTTTTTTCTATTAATTATTCCGTAACAATATAATTTTTTATAACTTATAGTATTTCCTACATAATTATCTAAACTTAAAACAAATAATAGACCAATAAGGAATATAATGTGTTCTTCTAGAAGTGAAAGGGATAAAAAATGAAATAAAAGTATTTTTTTAGTCAAAACTTGCGCGGAGTATAAAGTGCATGCACATAGGCGTCTTTATCGTTTCAATATTAATTCTCTTTTTCACACTATAATTCTTAATCCTTCCACAAGTTCTACAGCAAAAGGATGTGAATTTATTCCGTTTCTTTCCTTTTTCATTTGGTCACTATCAGATTGAATTAATGTTTGGGTATAGGTAAGGATCAGGTCGTATCAATAGTATTTATTAGTTATTCAATCTGAAATAAAAAAATTTATTTATTATTCATTTTATTAATAGTAGGTTATCTTTTAAAAAATATTTATGAGTATTTATAAAAAATAAAATATAAATTCAATTTAATAAAATACAAATTTAATTTAATTTTTAATCAAGACAAATTAAGTTTTAATTTTTTTTAAATAATTGATATATATATATATATATATATAACTTATTTTTAAATAAGTGTTAAAATATTTATTATTAAATAAATATTCACATGTATTAATTATTTACCTTAAATTTTTCTCATCCCTTATATGTATCCTCAAAGAATCTTCTATCCGAAAACATTTTAAACAAATGGTAAATTAGGAACCAATGGTTTATCATCATAATCAGAAACTTGTTATGACGTGTACTGGACTTGGTCAGCATTCTATTGTTCACTAACAAAATATCTCAACTCAAACTCATTTTCTCAGTCAAACTTTGACTGATTTTCATACATTACTTACATTTAACAATTAAATAGCACCCATTCCTTTGCTTCATCATTCACCATAAACCCTCCTCTCACTAAGCTTTTGCCATTTCAATTCTCTGTCCCAACAAATCAGTTTAAAGTTCAAAACTTAGTTGCCATTTCAATAGTTAGATAGAGTAAAA


Gene Sequence:
>Vu_34388(+)
ATGGAAAGTGAAAAGAGTTGGGAGCAGAAAGCTCTCGTGAGTGAGCTAATTCAGGGGTTGCAGATAGCAATAAAGTTGAAGGAAAACTTCAATATACCCTCTTCGATTCACGCTAGGGACTCACTACTGCAGAGTATATTGTCTTCTTACGACAAGGCTTTGCTTATTCTGAAACAAAATGCACCATTTTCAAATTCAGAAACCATGCATCAACCAACTCAAACTTCCTCACCACAGTTTCCTCCCAAAGATCACTACGAAGGTGCCCTCAAGGATCATCAACAACTTAAACAAAATTCAAAGAAAAGGTACAAATTTTAGCAGCACAAGACAATCCCTTCTAACGTAGGTTTGTTATTTCTATTTGTTCTAACACTGGTGGGAATTTCGCTGCAGAAAGAAGATGCCCAAATGGACGGAACAGGTTAGAGTGAAGATCCAGAATGGGGTTGAAGAACCTCTGCAAGATGATTACAGCTGGAGAAAATATGGACAGAAAAACATCCTCAATGCAAAATATCCCAGGTGAAATTTTTTTAAATTTGTCTCTAAGAAATTCATTGGTCACTGATCAAACAATTAACAACGGATTGTTACATTTGCAGAAGCTACTACAGGTGCACATTCCAAAAATCTAAGGGCTGCTTCGCCACCAAGCAAGTGCAGAGATCAGAAGAAGACCCCAATGTCTTTGACATAAGTTACCGAGGAAGCCACGTCTGTTCTCAGGGAAACGATGCCGTTCTGTCATTAAAGTTAGCAGACACAGAAGAGAAATCGCAAGGTTGTGACAGTGACGTTCATCATGCACAGTCATCGCGAGAAAGAGTTACAAACTACACAAACACGTTGACTGTGGAAACGGATAACATGACGCCACATCCATTCCCTTCGTTTGGATGCATGCCACAAGATAACCACCACACGTTTCTTCCTTCCTTCGTACTGGAGAATGATCCCTTTTGCAGCACCGTTTCCCAAACATCCTTCTTCTCTCCGAACACACCTGAATCAAATTATCTTGTGTCTCCGTCTTTCCATTTACATGATGAACTCGACAGGGTCTTTGACAAGCCGTGCCCTGATTCTGATGCTGCCGGGATCGTTTTAGCTGATGCATCAACCATCAATTCTCCAAATTTTGACTTCAATTTCTCACTCGATGCAGTGGGAATTGGTGCAAATTGCCCTTCAATGCCTGGGGGTTTTCATCCTAAGTGCACTTGA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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