Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_34374	LG10	10736354	10737337	PREDICTED: ethylene-responsive transcription factor ERF061	Map

Annotations

category	relationship type	keyword
Biological Process	involved in	regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component	located in	nucleus
Molecular Function	enables	DNA-binding transcription factor activity

SNP	Position	Effect	Amino acid change
A/T	10736413	synonymous_variant	p.Ser20Ser
C/T	10736428	synonymous_variant	p.Thr25Thr
G/A	10736605	synonymous_variant	p.Arg84Arg

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_34374.1

MDGMQERNSQLGTDIGSSLSKLILTSGSNTLDSIFSDCPPTNAASSNSVLDYLEPFGSSGFEPLGSSVYLRQRDILQKFYQESRGNGNGNGSGSLLPTSLANPSINSLYTASLTSSLTNPSKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKRERAKKIAAKKLSSATAHATRKESEKINSSASSSSSSLPLSPPSIFCDNWANELFSPSVSEDGIWKGENSPTSVSTECQMMVTDETEFEGCSLARLPSFDPELIWEVLAV*

CDS Sequence:
>Vu_34374.1

ATGGACGGAATGCAAGAAAGAAACTCACAGCTCGGAACTGATATTGGCTCCTCCTTATCAAAGCTGATATTAACCAGTGGCTCAAACACCCTGGACTCAATCTTCTCAGATTGTCCCCCAACAAACGCCGCCAGTAGCAACTCCGTGTTGGACTATTTAGAACCCTTTGGATCTTCCGGGTTTGAGCCTTTGGGCTCTTCCGTCTACCTTCGCCAGAGGGACATCCTCCAAAAGTTCTACCAAGAAAGCCGGGGGAACGGGAACGGGAACGGCAGCGGATCTCTTCTTCCCACTTCCTTGGCAAACCCGTCTATAAATTCTCTTTACACTGCTTCGTTGACTTCTTCTTTGACCAACCCTTCCAAGAAAAAGCTCTACAGGGGAGTGAGACAGAGACACTGGGGCAAATGGGTCGCCGAAATTAGACTTCCCCAGAACAGGATGAGAGTGTGGTTGGGCACCTACGACACCGCCGAAGCAGCCGCCTACGCCTACGACCGCGCCGCGTACAAGCTACGTGGAGAGTACGCGCGTTTGAATTTCCCCAATTTGAAGGACCCGACCAAGCTGGGGTTCGGAGATTCCGCCAGATTGAACGCCTTGAAGAGCTCCGTCGACGCCAAAATCCAGGCCATATGCCAGAAGGTGAAAAGGGAGAGAGCCAAAAAGATCGCCGCCAAGAAGCTCAGTTCCGCCACCGCTCACGCAACCCGCAAGGAGAGCGAGAAGATCAATTCCTCCGCTTCCTCGTCGTCGTCGTCGCTGCCGCTGTCGCCGCCGTCGATTTTTTGCGATAATTGGGCGAACGAGTTGTTTTCGCCGAGCGTTTCGGAGGATGGGATTTGGAAGGGGGAGAACTCGCCGACCTCGGTTTCGACGGAGTGTCAAATGATGGTAACAGACGAGACGGAGTTCGAAGGTTGTTCTCTGGCGAGGTTGCCTTCTTTCGATCCCGAGTTGATTTGGGAAGTTCTGGCCGTTTGA

Promoter Sequence:
>Vu_34374::LG10:10734354-10736354(+)

TTTGCTGTTGAGTTGAAAAGAAGGCAAAATTAGGGTCTAAAAGCTTGCTTCAGATCAGAAGCTAAACTCTACTGCAAGAAAAAAGAGGAGCCTTTGGCAATCACCATGTGCTCCCCATACCACTCACTTTACCTCGTCGTCGCTAACTAATCAACGACTTTGCATCGGCATTTCGTTCGAAATGCATGCGCACAATTTCAGTTTGATTTTAACGTACTCTTTCTTACACTACACACGGTTCACGGTGAGCAGCGAGAGTGAGCAAACTTTGTTCGAGGTTGACACCGATCAGTGTATAATGCCTGGATTCCCCATGTGTGTCTTGCACAAAAGCCTCTGTTACTTGTACAAATGCATGATTGCTTCTTTTTTCCTTTTTCTGGGAAAATATTTTGTCACCATTCACTAATTCACTTCTTCTGTCTTCAACCGGAAATGCCTTCAAAAGTATCGCTTTCACATTCAATGCTACGGTTCCATTTCGAGATAGGTGGCATAGACACGTTGCTGTTTTCGCTGGCACCGTTGAAAGTCAACATAAGAAAACCCACTGTTTATCCTCTATCAGTGCTTATGAATCCACAAGAAACGTATCTTCAAACAAATCATGCATATTTTGATTCTCAATGCGTCCCATCCGATCAGATCAAACTGCAATTTTAAAGGAAATGATAATTTTACAGTGATAAATCGAAGATAAAAATATGTAGATTTTACAGTGATATTGAAAGAAAAAAAAAAGGTGAGTTTGATTTAGTAAGAGAGAATTAAATGTTACTGGTAAGAGAAGGGCAATGATACGTGTTGATGTAGGAAACGCGTGGTTCTGACGCAGAAAAGGACCTTTTTGGAATGACATCCTCTGACCTGTGAAACTAGCCCTCTCTCATCACGTTCTGATATATCGCTGCAATAAATTGCAAAAGTAGGCTTTTTTCTGGTTGGGTGATGATGCAGTGCAGAGGTCATGGAGATGGACCCTCTGTTGTTGTTGTATGTAGATGGACCACGAAGGTGTCAAATCCGAACCCCTAATAAACCATACAATAAAAATTCTTGCCCCCTCTTCTTTTCCAGCAAATTCTCTTTTGGTGAAGATCAAGTGCAATTCTTTTTAGTCTTTAATACCTGTCTTTGATTAAATTAAATGATCGACACTGTTGCTTCTACTGCTCTACTCTCTTTATTGCCTTTGACTTTTGCCAATTTCCTATGCTCTTCCCCTTTTTCTCATTTCCCCCTCTCCATCAAAATATAATAATTACTTCGCATAATCTCTTAATTATTTACACCAAAACCTATACCTTTTAATAAAATGATATCATATCATATATTCTTAATATAGGACTACAAGTAAAAGAAAAAAAGATTTATATTAAAATTTTCCCAAAACTTTGGGGGAAAAAGTATCTCATGTATGTACTTTTGCTCCAAGGATGGTACTAGGTTTTGAATTTGAAGTTTGCAATACTGACCTGCAATAATTATCCAAATCAATGCTTAATTATGTAGAGCCATAGATAGAGAAGTACCTGTGGGCAAGCGAGGGCAGTGAAGTAATTTAGCGTGGGAGGAAGATGGTCACAGAGACAATTTGAGACGAATGAAACGATCACGTTGTGTGAACGGGGATTGGTTTGAAAAAATCTGTAGGAAAGTGCTTCCTGTTTCTATAAATAATCCCTGCCCAATGCTAATTACCAACACTCCCACCATAGCATACTGTTCCAAACCCCACCGCAACCCATTGTCTATATTAATTATCATCTTCGTCTTCCTCTTCTCCCACTCCTCTCTTCTCCTCATAAACTGTAGCCATAGAACTTGCAGACACTATTTTTTCTTTCCTTCTACGGTTAGGAAGAGGGACCAGTCTTTTTCCAGTGACCTTCTTCGTATACGTTTTCCTTTTTTTTTTACATCGGTTGCATAACCCTCCTCTTTTGGCTTGCCAGTCTTCCGGTAAAACGACGCTGGAGATTAAGGTTTGGCCAAAACCA

Gene Sequence:

>Vu_34374(+)