Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34329 LG10 10418582 10419471 PREDICTED: ethylene-responsive transcription factor ERF022-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of floral organ abscission, negative regulation of floral organ abscission, negative regulation of floral organ abscission, regulation of transcription, DNA-templated, negative regulation of floral organ abscission, negative regulation of floral organ abscission, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/T 10418892 synonymous_variant p.Pro166Pro
C/T 10419054 synonymous_variant p.Ser112Ser
T/C 10419096 synonymous_variant p.Ala98Ala
C/T 10419150 synonymous_variant p.Ala80Ala
G/A 10419151 missense_variant p.Ala80Val
G/A 10419155 synonymous_variant p.Leu79Leu
T/C 10419179 missense_variant p.Thr71Ala
C/T 10419339 synonymous_variant p.Thr17Thr
T/C 10419341 missense_variant p.Thr17Ala
T/A 10419416 5_prime_UTR_variant
T/A 10419422 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34329.1
MDQEPTSTMQQCGIAPTATSYRGVRQRKWGKWVSEIREPGKKSRIWLGSYESPEMAAAAYDVAALHLRGRTARLNFPELAETLPRPASSKSEDVQVAAQQAALRFSRSPTMSHNEICVSESSDRNSNNRKSNSKKKKSENSGVVPLQVGLSATQIQAINESPLESPKMWMMQMAETLRFGFGDEYSMMMVSCDGDDDYAMELSGWEEMHHESLWDSP*


CDS Sequence:
>Vu_34329.1
ATGGATCAGGAGCCAACAAGCACCATGCAACAATGTGGAATAGCCCCAACGGCAACATCGTATCGTGGTGTTCGACAACGAAAATGGGGCAAATGGGTGTCGGAAATTCGCGAGCCGGGGAAGAAAAGCAGAATATGGTTGGGGAGCTACGAGTCGCCGGAGATGGCAGCAGCAGCTTATGACGTGGCGGCGTTGCACCTCAGAGGACGCACCGCCAGACTCAATTTTCCTGAACTGGCGGAGACACTGCCACGTCCCGCCAGCTCCAAGTCCGAGGATGTGCAGGTGGCAGCACAACAAGCGGCATTGAGGTTCAGTAGGTCACCGACGATGTCGCATAATGAGATATGTGTGAGTGAAAGTAGTGACAGAAACAGTAACAACAGAAAGAGTAACAGTAAGAAGAAGAAGAGTGAGAATAGTGGTGTTGTTCCTCTGCAAGTGGGGCTTTCGGCTACACAGATTCAAGCTATAAATGAGTCTCCGTTGGAGTCACCGAAGATGTGGATGATGCAAATGGCAGAGACGCTTAGGTTTGGGTTTGGTGATGAGTATTCTATGATGATGGTGTCATGTGATGGTGATGATGATTATGCCATGGAGTTGAGTGGATGGGAAGAAATGCATCATGAATCCTTATGGGACTCTCCATAA


Promoter Sequence:
>Vu_34329::LG10:10419471-10421471(-)
ACCTACGCGTACACACCGTCACTTCAATTCACTATTTTCTAATTATATCATCATTTCTTTATTTTTAAAACTGTTTGGCTGTGTGATTTAAATTCAAACAAATCATATTAAATATCATTCTTTATTTACTTTTATTTTAAATCTATATTCATAAATTTCAAAATAAATTTTAAATTAATAATTAATTAGGATCCAACCAATAATAACATTAATAGTGTGATAGGAGTTCAACATCGAGTAGAACAATATGTCTAACAAACCACAAATCTAGTTAGAATAGACTCTAACCATAACTTTGATATCATATTAATAAGAACTTTAACTTAATATAATATCATAAAACTGACTCGTAAGATAACGTTATATTTATTTATATACTTTAAATTAGTTTTATTTATAAGATTTTCAACAATTTTTAACTAATAATCTTGATTATGCATGTTTACATTAACGAAAAATCATAAAAAAATATTAAAATTTTAACTTTATTTCACATGCCCAATTGTTTAGTTTGGATATTGTTTAGTTCTTTTTCTTCATTATTGAAGGTTTTTATTCTAATTTCCATAATTTATGACACAAACGCGTGTTTGAATGAGGTACTGTTCTCTTCAACAAAGCCAGTCTCAGTCTCAGTCCCTGTCTTTGTCTCATTCTTTTTATCCTTTGCCTTATCTTTCTAATAATTTTGGACCCACCTTTTATATTCAATGTTTCTTCATTATCCATTAAATTTTTTCTTTTCTTATATTCCAAGCTTTAAATATTGAAGAAAAAAAAATCTAAACATAAACACAAACATACCCAAGTCTTAGAAACGAGTTTTAACAGCTGTTATTATTGTCGGGAGTGAATGATTCTATACAAATATACTAATTCTGAAATTGACTATAACTTGCAGTGAAAAAAAAATGTATATTGATTTCTAGAAGAAGAAATTAAAGCATAAGCATAACCACCCTGCATGTGGGTTGGTGGTAGGTAAAATAAGTACACCACCAGGCACCGCCATTTACTTTACTGAACAAACATAATCATTTTAATTTTATTTTTTTGATTTTCTATCTCTTACATATATATTTCTGAAAATTTTAAAAATAAAAATAGAATAATATACTTCCCAATATTTATTTTATAATATTTTAATATTATCTACGTGTTATTATATGACTGATTCAAAATTAATCTACAATCAATAATAATTATTATAAACATCATGGACCAATCACAAAATGAAAATGTTAAAATATTGTTAAAACATCGTTATTTTAAAAATTATTAGTTTCATACATGAGAAAAATGCGTGCAAAGTTTCCTTTTCTTCTATCTTACCTTCGTTTGCACTCCCCCCAACAAGCTTGAACTACAATATGCTCTTCTCTAATGACAACTGAAACTAACACCTTTCAATGTTTTTAAGAATAAGAAAAATAAAATTAAAGACAAAATATAGGAGAATGAAATTTTTTAACTATATTTTTATTCTTAAATTATTAGTTATTTTAGTTTTTGTATATGTATTTCAAACTTAAATTTTTTTTTTGTTTAAAAGATATATAGATGCAAATTTTTTCATTTAAGGGTAACTATTTATATAATAAATCACATAAATATCATCCAAAATATTATTTTTTTGTTAATATCTTAAAAAATTAGCATAATTTACGTTTGTCATATGAAAAAGATTAACACAATTAGACAAAGATAATGCATTCATAAATTTCTTAAATACGAAGAATTAACAAAATTCAAAATCATATTATGATTTAAAAAAAAGTTAATATTTTATTTTAATTAGTGGCATAAATTAATCCAAGTGTTTGTTGTGACATCACATAGATTGAATAATAATGCAAAAAGAAAGCATGGTAGCAGTAAGTAGTAGCATTGCTCTCTCACTGACAGCATGTTCTCCACTTAAGTGTAACTACGACGAAACTCACCTCTTTCTCATCTCATTTTCAACCTTATATAACATCACATCACAACCATACAAATTC


Gene Sequence:
>Vu_34329(-)
ACTCTCAAACTCTCATCAATAAGATCACATCAAACGCTATATACTACAAACAACAAAACAAAAAAGCTCTCTTTTTCGTTTCATGGATCAGGAGCCAACAAGCACCATGCAACAATGTGGAATAGCCCCAACGGCAACATCGTATCGTGGTGTTCGACAACGAAAATGGGGCAAATGGGTGTCGGAAATTCGCGAGCCGGGGAAGAAAAGCAGAATATGGTTGGGGAGCTACGAGTCGCCGGAGATGGCAGCAGCAGCTTATGACGTGGCGGCGTTGCACCTCAGAGGACGCACCGCCAGACTCAATTTTCCTGAACTGGCGGAGACACTGCCACGTCCCGCCAGCTCCAAGTCCGAGGATGTGCAGGTGGCAGCACAACAAGCGGCATTGAGGTTCAGTAGGTCACCGACGATGTCGCATAATGAGATATGTGTGAGTGAAAGTAGTGACAGAAACAGTAACAACAGAAAGAGTAACAGTAAGAAGAAGAAGAGTGAGAATAGTGGTGTTGTTCCTCTGCAAGTGGGGCTTTCGGCTACACAGATTCAAGCTATAAATGAGTCTCCGTTGGAGTCACCGAAGATGTGGATGATGCAAATGGCAGAGACGCTTAGGTTTGGGTTTGGTGATGAGTATTCTATGATGATGGTGTCATGTGATGGTGATGATGATTATGCCATGGAGTTGAGTGGATGGGAAGAAATGCATCATGAATCCTTATGGGACTCTCCATAATATATGTGATTAATTACACATTGATATTCAATTAATGTACTACCCTTGATTTAGGGCATTCTATTTATTAATGAATGATTAATGAATGATTAAAGAATCATGTGGTTTTAGTGAGACTGATTCAATGAAGCAATAGGATTATTTAATGTTGTCA