Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34286 LG10 10112952 10114106 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/G 10113012 missense_variant p.Arg277Pro
G/C 10113095 synonymous_variant p.Leu249Leu
G/T 10113270 missense_variant p.Pro191His
A/G 10113381 missense_variant p.Ile154Thr
G/A 10113570 missense_variant p.Pro91Leu
C/T 10113591 downstream_gene_variant
G/A 10113618 downstream_gene_variant
C/G,* 10113626 downstream_gene_variant
T/C 10113634 downstream_gene_variant
T/A 10113639 downstream_gene_variant
A/C,* 10113650 downstream_gene_variant
T/G,* 10113654 downstream_gene_variant
T/G,C 10113661 downstream_gene_variant
A/G 10113666 downstream_gene_variant
T/C 10113688 downstream_gene_variant
C/T 10113712 downstream_gene_variant
A/G 10113715 downstream_gene_variant
A/G 10113717 downstream_gene_variant
C/T,* 10113722 downstream_gene_variant
G/A 10113742 downstream_gene_variant
G/C 10113779 downstream_gene_variant
C/A 10114044 missense_variant p.Glu21Asp
T/A 10114047 missense_variant p.Glu20Asp
G/A 10114051 missense_variant p.Pro19Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34286.1
MMRTPSSDESGLKKGPWSPEEDKILVDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSDEEEQLIINLHAVLGNKWAAIASHLPGRTDNEIKNLWNTHLRKKLLQMGLDPVTHRPRTDHLNLLTNLQQILEAAKIVSSFTNPCDINNALRLHSDVTQLAKFQLLQNMFQLTGATPSPSSLTDGFLNDVLGFNQCSNLQNLHDGNSVSQILPNVQNFEALQLPSPSNSLPNLVSASPQRSPVKAENVNANSKECCNPSSTTFELTWGDFMEEDATDNYWKGFIE*


CDS Sequence:
>Vu_34286.1
ATGATGAGAACACCAAGCAGTGATGAAAGTGGGTTGAAGAAGGGGCCATGGAGCCCAGAAGAGGATAAAATACTAGTGGATTACATTCAGAAGCATGGCCATGGAAGTTGGAGAGCCCTTCCAAAGCTTGCAGGATTGAACAGATGTGGAAAAAGTTGCAGACTGAGATGGACTAATTACCTCAGACCTGATATCAAAAGAGGCAAATTCTCTGATGAAGAAGAGCAACTCATCATCAATTTACATGCTGTTCTTGGGAATAAGTGGGCAGCCATAGCATCTCATCTGCCAGGAAGAACTGATAATGAAATTAAGAATCTGTGGAACACACATTTAAGGAAGAAGCTTTTGCAAATGGGGTTAGACCCAGTGACTCACCGTCCAAGAACCGATCACCTAAACCTTCTTACCAATCTACAGCAGATTTTGGAAGCTGCAAAAATTGTCAGCAGTTTCACAAATCCTTGTGACATAAACAATGCTCTAAGGCTACACTCAGATGTCACGCAACTGGCCAAATTCCAGTTACTGCAAAACATGTTTCAGCTCACTGGTGCCACTCCTTCTCCTTCCTCACTGACAGATGGTTTTCTGAATGACGTTTTGGGGTTTAATCAGTGTAGTAATCTCCAAAACCTTCATGATGGTAATTCAGTTTCTCAAATCCTTCCCAATGTCCAAAACTTTGAGGCCCTTCAGCTGCCTTCTCCATCAAATTCCCTTCCAAATCTGGTTTCTGCCTCGCCTCAACGTTCTCCAGTAAAAGCAGAAAATGTTAATGCAAACTCAAAGGAGTGTTGTAATCCTTCTTCCACCACCTTTGAGTTAACGTGGGGAGATTTCATGGAAGAAGATGCAACCGATAATTATTGGAAAGGTTTCATAGAGTAA


Promoter Sequence:
>Vu_34286::LG10:10114106-10116106(-)
CCTTTAATTTAACTTTGTCTGAGAATCATCTTCTTATTCCCACTCTCACCTAAAAGTAGTGATGATTCTTATATTAGAACTAATTAATATACAGATTAGAGCAGAAAAATAAAATCGTATTTCTTTTTATAAAGTCGTGAATACTTGATTTTTAAATACATGGTGGTGGGATGCAAATACGTAATCATTTTTCACTTTTACTACCTAACAAAGATTGAATAAAAGGCTGCTGCACCTACCATTCAGTGTTCTTGTACATAAAATATGCAGATTTTATCAAACACATGCCAATACCAGTCGTTGATTTCACAATATAATCCCATGATATTGTCACTGGGAATCCAAAAGTAAATCCAAGTCCCACCTTGGATAGAAACGAAAAAATAGAACATTATATAATATAAGAATGAAAGACCTATTAACTCATTGTTGAGTGGTATCAATTTTTTACGTGGTTGAGTTTAGATCTCATTGGTATTATGTTGGTATCAGAGTTCGTCTTCGTCTTCACGACGGGCTCAGACCTTCCAGGTAAGCGTGTCCGTTAAAGATGTACCAATGTGAAACTTGTTATCTATATATGTTGTGTGGATTCGTTGAATGGAGGGTCCCAGAAGAGGATGGTTTATGCAGTTTTTGCGTCCATTGAGTTGCATGACACGAAACACAAAATCATTAAAATGTTGAGACACATTGGATGGTTTCATGTTAGGAAGTTTCTTCTGTGATTGGGCAACGAAAAGTGAGTTCAGCAGTCACTGAATGATTGCCACGTGGAAACCAACCCCAGCCGGTGGTTGAAGTTCGTTGCTGTTTTTGCGATGTGTTTTGGAACATGTTGCCCTAGCCACACGCATACATGCATGTGCCTTGTTCTTGTTGGACAAGTGAACAAGGTCATACTCATACATCTATATCCTTCTCTACCAATACCTAGCCCCTTTTGAAATTCTCACCATCTAACCCTTCTACGTATATCCTTCCCATTCATTCATTTATTCTTTTCACTTCTCTATTCACCATTTTCTTCCTTTCTCTCTGCATAAAACAAAATCTCTTTCCTTCCGGTTATGTTGACTCCACTGGCTATAGTCTTGCTACTTTTGTACCTCTATGGAAGATTAATTTAAACCACAAATTAAATAAAGTCAAATCATAAAGAGAAAGAAGGTTTGTCACAGAAGCTGCTGTTCTGTAGATATCAGTTTTTATCAATGATAAAGTCAAGCGTAAGCATAAGTCTTACATAAAAGTGAGAAAATTGATATATAATGATGAAGACTGTAAACTTGAAGTTTTTGGTGTGATCTCAATCATTTATATAATTGAAATTAGATTTTATCCATGTTGTGTTTTCTTATCACTAAAGTCCATTAATATGTGTATGTATGTATGGATTGGATTTATACTAAGAATAGATTAAGATTGAAAATAGATAAAATTTAAGGAGAAGAATATAAGTTATAATTACATGAAAGAGATGCACGACATTTAGGTTACTCTAATTAATGTGCTGAAGATTAAGTATGAAAACTGATATGATTTCATATTTCAGTATACTGCGATATATATGGAAGCTGAAGATAATATCGTGTTTTAGAATACTGACAAAAACGAGGTAAGAATTTTCAACTGAAACTGTTGATTATAATGTGTATGATTTCTAAAAGGAAAATATTTACGTAACTGTTGGTTGACATATTAGAGATTATTATGAGTAAAAATAAATGCAATTTGTGGAGTGAGTGTGTGCAGATTCCTTTCAGGGTCGTTATCTATATGACTTTGTGTACGATGCCACCACAACATGATGCATACATCGTAACCTTATATATAACAAACACTTATGTGGTAAATGTTAGTTTTAACATCCTCTTCAAGAACACTTCAAAGGTAATTGGTTTCTCTTTCTCTTTTTTGGTCTCTTCAATGAAACTGCATATCCTTATACTATATTGTTATTTCATCATGAATTAGTATTATTATTGCATGCAGTGGTG


Gene Sequence:
>Vu_34286(-)
ATGATGAGAACACCAAGCAGTGATGAAAGTGGGTTGAAGAAGGGGCCATGGAGCCCAGAAGAGGATAAAATACTAGTGGATTACATTCAGAAGCATGGCCATGGAAGTTGGAGAGCCCTTCCAAAGCTTGCAGGATTGAACAGATGTGGAAAAAGTTGCAGACTGAGATGGACTAATTACCTCAGACCTGATATCAAAAGAGGCAAATTCTCTGATGAAGAAGAGCAACTCATCATCAATTTACATGCTGTTCTTGGGAATAAGTAACTAACTATAATCCTCACACCTTCTTCTTCATCATCATCTACACAAGAATCATGACTACTTCAATGATGAGCATGATTTTAGTATTCTAAATTAGTACCATAAAATGGTCATAAAAGTGTAAATTTTTGTATTCTTTAATTCTTTCAAGAAAAAAGAGAGTAAAAAGTGAAGGATATATAATAAAAAATTTAGATATAAAAAATTTAGGTGTGTGAAATAATCAATACTCTTCTAAATTTGTTTTCATTGTTTATTATCAGGTGGGCAGCCATAGCATCTCATCTGCCAGGAAGAACTGATAATGAAATTAAGAATCTGTGGAACACACATTTAAGGAAGAAGCTTTTGCAAATGGGGTTAGACCCAGTGACTCACCGTCCAAGAACCGATCACCTAAACCTTCTTACCAATCTACAGCAGATTTTGGAAGCTGCAAAAATTGTCAGCAGTTTCACAAATCCTTGTGACATAAACAATGCTCTAAGGCTACACTCAGATGTCACGCAACTGGCCAAATTCCAGTTACTGCAAAACATGTTTCAGCTCACTGGTGCCACTCCTTCTCCTTCCTCACTGACAGATGGTTTTCTGAATGACGTTTTGGGGTTTAATCAGTGTAGTAATCTCCAAAACCTTCATGATGGTAATTCAGTTTCTCAAATCCTTCCCAATGTCCAAAACTTTGAGGCCCTTCAGCTGCCTTCTCCATCAAATTCCCTTCCAAATCTGGTTTCTGCCTCGCCTCAACGTTCTCCAGTAAAAGCAGAAAATGTTAATGCAAACTCAAAGGAGTGTTGTAATCCTTCTTCCACCACCTTTGAGTTAACGTGGGGAGATTTCATGGAAGAAGATGCAACCGATAATTATTGGAAAGGTTTCATAGAGTAA