Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34264 LG10 9962473 9966839 PREDICTED: protein tesmin/TSO1-like CXC 2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 9962525 3_prime_UTR_variant
T/G 9962541 3_prime_UTR_variant
G/T 9962699 missense_variant p.Pro768His
A/T 9962718 missense_variant p.Leu762Met
T/A 9962720 missense_variant p.Lys761Met
G/A 9962878 synonymous_variant p.Ser708Ser
T/A 9962901 missense_variant p.Thr701Ser
C/T 9962952 missense_variant p.Val684Ile
G/A 9963015 intron_variant
C/T 9963047 intron_variant
T/C 9963049 intron_variant
C/T 9963060 intron_variant
C/T 9963068 intron_variant
A/T 9963074 intron_variant
C/A 9963080 intron_variant
G/A 9963143 synonymous_variant p.Thr649Thr
G/A 9963146 synonymous_variant p.Asn648Asn
G/C 9963186 missense_variant p.Ala635Gly
A/G 9963218 synonymous_variant p.Thr624Thr
A/T 9963239 synonymous_variant p.Ser617Ser
C/T 9963357 intron_variant
C/T 9963358 intron_variant
C/G 9963417 synonymous_variant p.Gly601Gly
T/G 9963465 intron_variant
A/T 9963467 intron_variant
C/A 9963627 missense_variant&splice_region_variant p.Glu562Asp
G/A 9963675 intron_variant
A/T 9963677 intron_variant
G/A 9963681 intron_variant
T/C 9963818 synonymous_variant p.Lys524Lys
A/G 9963994 intron_variant
A/G 9964059 intron_variant
C/G 9964136 missense_variant p.Gly483Ala
T/G 9964254 synonymous_variant p.Pro472Pro
T/C 9964265 missense_variant p.Lys469Glu
A/T 9964266 missense_variant p.Asn468Lys
A/T 9964270 missense_variant p.Phe467Tyr
G/A 9964325 missense_variant p.Leu449Phe
G/T 9964332 missense_variant p.Asp446Glu
G/A 9964376 missense_variant p.Pro432Ser
T/C 9964398 synonymous_variant p.Thr424Thr
A/T 9964403 missense_variant p.Ser423Thr
G/A 9964404 synonymous_variant p.Ile422Ile
A/C 9964428 synonymous_variant p.Leu414Leu
G/A 9964523 stop_gained p.Gln383*
C/A 9964532 missense_variant p.Gly380Trp
A/T 9964578 missense_variant p.Asn364Lys
G/T 9964605 synonymous_variant p.Ser355Ser
G/C 9964627 stop_gained p.Ser348*
A/G 9964632 synonymous_variant p.Asp346Asp
T/C 9964784 intron_variant
A/C 9964834 intron_variant
G/A 9965171 synonymous_variant p.Asn226Asn
C/T 9965358 missense_variant p.Ser164Asn
A/G 9965519 synonymous_variant p.Thr110Thr
A/C 9965705 intron_variant
A/T 9965710 intron_variant
A/T 9965859 synonymous_variant p.Pro30Pro
A/T 9965889 synonymous_variant p.Pro20Pro
A/G 9965902 splice_region_variant&intron_variant
C/A 9965908 intron_variant
T/C 9965966 intron_variant
T/C 9966025 intron_variant
T/C 9966048 intron_variant
C/G 9966088 intron_variant
T/C 9966137 intron_variant
A/T 9966154 intron_variant
A/G 9966160 intron_variant
A/G 9966198 intron_variant
A/G 9966247 intron_variant
A/G 9966378 intron_variant
T/C 9966416 downstream_gene_variant
C/T 9966448 downstream_gene_variant
A/T 9966453 downstream_gene_variant
A/T 9966654 downstream_gene_variant
C/A 9966668 downstream_gene_variant
G/A 9966754 synonymous_variant p.Thr12Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34264.1
MDTPERNQISATLSKFEDSPVFNYINSLSPIKPVKSVPISQTFNSLSFSSPPSVFTSPHVSCLKESRFLRRHIPLGTWKPKVSSEDVNKVHTSEEEETLADSKRAHHNKTESQENTEKRVSIGDASIELSSEHIKFSDEPQQTLKYDTCGSPGYDPSLCDDEDSTLLEIAGEAAADVGYVQEGCKTDSVESEVHLQEICQMEPKSEDPDCYWDSLVPDGSDMLIFNSPGEAEAFKGLMHKPLDPSIRLSDFMSVLPLSAVHNGRKMFIVDSVASGSEHEIGDHCSEPTIAATDTDQTRDNLADVVLVTSNYNENANDQLVSVTHRAIRRRCLDFEMANVQKKNSDDNSKASSSTSESDERNVANEKQLLPAKLNGNFQRGILQGIGLHLNALAALKEYKGIQIENLSSGRHLSLPNSTSLQISTSQEQQHLPLVPVSSERDLDSSDNVLQSTEDCSQPSVYMAGEDFNKNSPRKKKRKLETPGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPVHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVPEIGEDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSIGCRCEGCKNAFGRKDGSAPVSIETEQEETETTDKAMAEKASQKTEIQNTEDHPDSATMSTPLRLSRPLLPLPFSSKGKAPRSFVTTISGSALFASQKLGKTNSLWSQSKHFQTVPDDEMPDILLGDTSPITCIKTSSPNGKRISSPSCDLGSSPSRRGGRKLILQSIPSFPSLTSHP*


CDS Sequence:
>Vu_34264.1
ATGGACACCCCAGAGAGGAACCAGATCAGTGCTACCCTCTCAAAGTTTGAGGATTCACCTGTTTTCAATTATATCAACAGTTTGTCTCCTATAAAGCCCGTGAAGTCTGTTCCCATTAGTCAGACTTTCAATTCACTGAGCTTTTCGTCACCTCCATCCGTTTTCACATCACCCCACGTCAGCTGTCTCAAGGAATCTAGATTCCTCAGAAGACATATCCCATTGGGCACATGGAAGCCTAAGGTTTCTTCTGAAGATGTAAATAAAGTTCACACAAGTGAAGAAGAAGAGACTCTTGCAGATTCTAAACGTGCCCATCATAACAAGACTGAATCACAGGAGAACACTGAAAAAAGGGTTTCTATAGGAGATGCTTCAATTGAGCTATCTAGCGAGCACATAAAATTCTCAGATGAGCCGCAGCAAACTTTAAAGTATGACACTTGCGGTAGCCCTGGCTATGATCCCTCACTCTGTGATGATGAGGATAGCACTCTTTTGGAAATTGCCGGTGAGGCAGCAGCAGATGTTGGCTACGTTCAGGAAGGGTGTAAAACTGATTCAGTCGAGAGTGAAGTTCATCTTCAGGAAATATGTCAGATGGAGCCAAAAAGTGAAGATCCAGACTGTTACTGGGATAGTTTAGTTCCTGATGGCTCTGATATGCTAATCTTTAACTCCCCAGGTGAAGCAGAAGCTTTTAAGGGTCTGATGCACAAACCGTTGGACCCTTCTATACGACTGAGCGATTTTATGTCTGTGCTGCCACTTTCTGCTGTCCATAATGGTAGGAAAATGTTCATTGTTGATTCGGTTGCTTCAGGTTCTGAACATGAAATTGGAGATCATTGTTCTGAGCCAACGATCGCAGCCACGGACACGGATCAAACACGGGATAATCTTGCCGATGTTGTTTTGGTGACTAGCAATTATAACGAGAACGCAAATGATCAGCTTGTTTCTGTCACGCACCGTGCCATACGGAGGCGTTGTCTGGACTTTGAGATGGCCAATGTGCAAAAGAAGAACTCTGATGATAATTCAAAAGCCAGTTCAAGTACATCCGAGTCTGATGAGAGGAATGTTGCCAATGAAAAGCAACTTCTTCCAGCAAAACTCAACGGGAATTTTCAGAGGGGGATTTTGCAGGGAATTGGTCTACACCTGAATGCACTTGCCGCCTTAAAAGAATACAAGGGCATACAAATTGAAAATTTGTCTTCTGGAAGACATCTCAGTCTTCCCAACTCTACTTCTTTGCAAATCTCTACAAGCCAAGAACAGCAGCATCTACCGTTGGTACCTGTATCATCTGAAAGAGATTTGGATTCATCAGACAATGTGCTTCAGTCTACCGAAGATTGTTCCCAGCCATCAGTTTACATGGCTGGTGAAGACTTCAATAAGAATAGCCCAAGAAAGAAAAAGCGTAAGTTGGAGACACCTGGAGAAACTGAGGGCTGTAAACGCTGCAACTGCAAGAAGTCAAAGTGTTTGAAGCTTTACTGCGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCCTGCTCCTGTCAGGATTGCTTCAACAAACCTGTTCATGAAGACACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCGAAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGATTCTGTTCCTGAAATTGGGGAGGATCCAAATAAAACTCCGGCTTCAGCACGACACAAAAGAGGATGCAACTGCAAAAAATCCAGCTGCCTAAAGAAATACTGTGAATGTTATCAGGGTGGTGTCGGTTGCTCCATTGGGTGTAGATGCGAAGGGTGCAAGAATGCTTTCGGCAGAAAAGATGGTTCTGCTCCTGTAAGCATAGAAACTGAGCAAGAAGAAACGGAAACAACTGACAAGGCTATGGCAGAGAAAGCTTCACAGAAAACTGAAATTCAGAACACCGAAGATCATCCGGATTCTGCTACTATGTCAACACCATTACGACTCTCCAGGCCTTTGCTTCCGCTGCCCTTTTCATCAAAGGGAAAGGCACCAAGATCCTTCGTTACCACCATCTCAGGCTCTGCATTGTTTGCCAGCCAAAAGCTTGGGAAAACAAACTCTCTTTGGTCTCAATCCAAGCATTTTCAAACTGTCCCAGATGATGAAATGCCGGATATTCTCCTAGGTGATACCTCTCCTATCACATGCATTAAAACTTCTTCTCCAAATGGCAAGAGGATCTCCTCTCCCAGCTGTGACTTGGGATCATCTCCTAGTCGCAGAGGTGGCAGAAAGTTGATATTACAATCCATTCCTTCATTTCCTTCTCTCACCTCTCACCCTTAG


Promoter Sequence:
>Vu_34264::LG10:9966839-9968839(-)
CACTTTTCATTAAAATAATTACGTGCTTGAAATACTGAATTATATTTGGAAGTGTCAAACTAATAATTAGAGTTATTAGGAATCGTGTTTATAATTGTGTAATAATTCTGAAGACCAAATAAGTTATTAATATATAGTTTTATAGTAAAAACTTATAATTTAGTGATGCCTTTTAAGATGATTTCTTTTAATATAAAATATTGAATAACATAGAAAGGTTATGCAACTCACGTAATGTAGTCCATCCTCGAGTATATTTTTATGATTAAGATATTTTCTTAGAACTTTATAATTAAAAAATTAGGAAGTAAAAATAGGAAAAGATCTTAGCCCTACTTCAGGATGTTGAATTTAATTACCAAATTCAAAATAAAAACACATTGAACAAATCAGAAAGATGTTATATTTGTTTTTTAAGATTGTATTTGCTATGTAATATATTCTTTATAAATGATAAAAAAAAACATTTTTAGACTGTCTAAGTGAAATTGAACTCAAATTTATCAGTCAAAGTTCCGTTTGCAAGTTTTGAAAGTAAAAAAAGTTATTAAAACGATTTTTTTATATTAATATTTTTCTAGTAGTTATAACTCACTCTAACTATTTTTAATGTTTATTTAATCAAAATAAGTGTGTGGACCTAAAAATCTAAATATTTAATTATGAACTTTTTTTCACCGGAAAGAAAATACTGAATATTTAATAACATTAAATATATTTGACGTTATATGATGACATGCACACGACAACGGAATTCCATTGGTCAAAGTTTGATCGGAACGGTCCAACGAACGGAGAACAGCGTCTTAGGTTAGTTGTCATCTAAATGAACGGTGGATTCTAAATTCCATGCGTGGAAGTGCGTGTTATGGGGTTGCGTACTCCACACTTCAGAAGGTACGTACGTCATTGACTTTCAACTTTCCAAGATTCAGGTATGCATGATCAGCGTAGCATGTACGCGAGTGTTCACCACTTTCCATGTGCCGCACCCACACCAGAACACTCCCTTTTCAAATTCCCAGCGCGCTAAAACGCAATGCCTTAATTAAATGCCTTCATATTCGTGTGAGTGTGAGAGTGTCATCTTATCTGATACAGAATAGACGCTGCTTATTTTGTCGTCATTAATTTAACGGCTACGGTTAGGTCTGATATTCAATCCCTCTTATTCCGTTAAAAAAACACTGTCAAAAAGAATTTATATTGTTTTAATGTGCGAAAAAAATATATTTAATTATTACTATAATTTTCAGAAACTCAAAACGGTAACAAATATTTATTGAGTAATTGTACCATGTCTGCCCTAGTTGGTCACCTTCATTAAACATTTTTACACAATTGAATTAAATAGTCAATCATGAATTTTCATGAGGCTGAAACGTTTCTTAATTGAATGGTTTCTCAGATAGCTTGAAAATTAAATGTCGGGTTTCGCGTATAAATACGTTGGACACGTAAATATATTATGAACGTCTTACGATGTTTTTGGCATGATGAAAAAAATAGTAGTAAGAAAATAAAAAAAAGATTTTTATTCTGTGTTGAAATGGAAACAAAACATCATCACTGTAATTTCCTCTTTTTTTCAGAAACTTTTTGTTTATAGAATGAGTTGGGAGCAGTTACAAGATTATGGCAGACGGAAATTAACAGGGTTGAAGGCATTCGATTATGGAAGATCTACAACATCTGCAACATAATACAGCAGTTATTATTTGAATGAATGAAAAGAAAAGGAGAGAGGGTAGAAAGAAACAAGGAGAAAATCCAGATAGAGGATGTGGGTGGTTAACTGTATATGTGTTGCTTTAGCGACAAAATAGAAAAGAAGGAAGCAAAAGAGAAGAAAGAAAGAAAAGAATAGAAAGGAAAGAGAGAGATAGAGGAAGGGACAGCTGTGGAAGGAGGGGTTGTGGTCCCCACCACAAAATCTTTCTTCTCCCGCCTTCCCGCTTCTTGAATCATCCTCATCTTCTTCTTGTTCTTGTTTCCTTATC


Gene Sequence:
>Vu_34264(-)
ACACCCCACTTATTTGGAGAAACTGATGTTCTGGTGCTGCCATTCTTGATATGGACACCCCAGAGAGGAACCAGATCAGTGCTACCCTCTCAAAGTTTGAGGTTTGCTTCTTCTTTCATTCTCTAAACCTTCTCTAAACCTTCACCACTTCAATTTCATGTTCTCTGTCTTGTCAAACACTTCCTTTCTCTACTTTTTTTCTGCATGCCACTCATTCTGCACTTTCTTTCTTCTCAATTTTCGCTTCCACTCTTTTCTTTTGCTTCAAACGTTTCTCCATCTAACCTAAATGTCTTATCTTTCTGATTTTGTTCAAGTCATAGTGTCAAAGTTTCTCTCTTTGGAACGAATTGTTTCATTTCTCTAGATCTTTCTTCAACTTCATTTTAGAGGTCATTTTTACAGTTTTTTTGTTTTTGTGGGAGTGCTCTACTATTCTTTTTCTCTCTTCTTCTCATGCTTTTGTTGATACAAGTCTAAACTTTGCGGGTTGCTGTACTCGTTTTTTAACAAGGTTTTGTACGTGCCATCAAATTGAGAAAATTCCACGAGTTTTCTTTTCTTTTCTTTTATGTATTTTATGCATTTGCATTCATACAGACGGTTAATTCGCCAAAACGGGTTTTGACTGGCTCTAAATTTTTAAGAATGATGTTTCACCACAAACTTCACAAACAGTTTCTAATATAATTTACGTAGTACATTCTTGTAGTGTTTTATAATGTTCAACGAGTAATTCTTGTCAGATCTGGTCTGTTAAGAATGATTTGTAAATTATTCTGATTTGTTGTAGTTGTCGGCAAATTATGGAATGATTTTCTCCATTTTTATTTTTATTTTTGGTAGCTCAAGTTACTCTATTCCTGTGTGTATACATGGTTATCCTTGAATTTATCCAGTTTAAAGTATATATATATATTTTTTAACATTTGCCATATGCAGGATTCACCTGTTTTCAATTATATCAACAGTTTGTCTCCTATAAAGCCCGTGAAGTCTGTTCCCATTAGTCAGACTTTCAATTCACTGAGCTTTTCGTCACCTCCATCCGTTTTCACATCACCCCACGTCAGCTGTCTCAAGGAATCTAGATTCCTCAGAAGGTAATTTCGAAAATTTCTGATTTTTATGTCGTTTTTTGTAACATCGAGTTATATATATATAGTGATCCATCTCCGGTTCTTGCCAATTGTTCGTCTTTAGACATATCCCATTGGGCACATGGAAGCCTAAGGTTTCTTCTGAAGATGTAAATAAAGTTCACACAAGTGAAGAAGAAGAGACTCTTGCAGATTCTAAACGTGCCCATCATAACAAGACTGAATCACAGGAGAACACTGAAAAAAGGGTTTCTATAGGAGATGCTTCAATTGAGCTATCTAGCGAGCACATAAAATTCTCAGATGAGCCGCAGCAAACTTTAAAGTATGACACTTGCGGTAGCCCTGGCTATGATCCCTCACTCTGTGATGATGAGGATAGCACTCTTTTGGAAATTGCCGGTGAGGCAGCAGCAGATGTTGGCTACGTTCAGGAAGGGTGTAAAACTGATTCAGTCGAGAGTGAAGTTCATCTTCAGGAAATATGTCAGATGGAGCCAAAAAGTGAAGATCCAGACTGTTACTGGGATAGTTTAGTTCCTGATGGCTCTGATATGCTAATCTTTAACTCCCCAGGTGAAGCAGAAGCTTTTAAGGGTCTGATGCACAAACCGTTGGACCCTTCTATACGACTGAGCGATTTTATGTCTGTGCTGCCACTTTCTGCTGTCCATAATGGTAGGAAAATGTTCATTGTTGATTCGGTTGCTTCAGGTTCTGAACATGAAATTGGAGATCATTGTTCTGAGCCAACGATCGCAGCCACGGACACGGATCAAACACGGGATAATCTTGCCGATGTTGTTTTGGTGACTAGCAATTATAACGAGAACGCAAATGATCAGGTAGGCATGTGAAATCTGTAAGTCTTGAGGCATGGTTCTCTAGGCTCTGTTGTTTTGATTTTGGTATGAAATATGTATATCAGCAATTAACTTTTTTCTCATCAGAAAAAATTCAACTGTACAATGATGCACTGTTTCCACATTTTTAAGTGTATGATCCTCTTGGGTTTTGGTTTCAGCTTGTTTCTGTCACGCACCGTGCCATACGGAGGCGTTGTCTGGACTTTGAGATGGCCAATGTGCAAAAGAAGAACTCTGATGATAATTCAAAAGCCAGTTCAAGTACATCCGAGTCTGATGAGAGGAATGTTGCCAATGAAAAGCAACTTCTTCCAGCAAAACTCAACGGGAATTTTCAGAGGGGGATTTTGCAGGGAATTGGTCTACACCTGAATGCACTTGCCGCCTTAAAAGAATACAAGGGCATACAAATTGAAAATTTGTCTTCTGGAAGACATCTCAGTCTTCCCAACTCTACTTCTTTGCAAATCTCTACAAGCCAAGAACAGCAGCATCTACCGTTGGTACCTGTATCATCTGAAAGAGATTTGGATTCATCAGACAATGTGCTTCAGTCTACCGAAGATTGTTCCCAGCCATCAGTTTACATGGCTGGTGAAGACTTCAATAAGAATAGCCCAAGAAAGAAAAAGCAAGTGCAGTTGTTGATTACCTGTGCATTTCGTTATTTTGAACTTTTCCTTTCTTCATTAGTCTCATATCAAGTTTGATTTGCAGGCGTAAGTTGGAGACACCTGGAGAAACTGAGGGCTGTAAACGCTGCAACTGCAAGAAGTCAAAGTGTTTGAAGCTGTAAGTTTGAAAAGAATGTTATTATATTCATTCTTGGGTTGCAGAATTGGAATATGGTACATTGGTTAATGTCCTAACTTCATGAAGTTTTCATTGCATGAAAGGCTTGAGAACCAAGAAAGGAAAAGAAAATGACCTCAACGTAGTTAAAATTTGAAATTGACCTTATTTATTACCTTTTCTTTTTGTATCAGTTACTGCGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCCTGCTCCTGTCAGGATTGCTTCAACAAACCTGTTCATGAAGACACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCGAAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGATTCTGTTCCTGAAATTGGGGTTAGAAAATAAACTCAGTTTTCCACGTGTGCAATTTAAACCACCTTTTATTGGGTGTTAATTATATCTTCTTGCAGGAGGATCCAAATAAAACTCCGGCTTCAGCACGACACAAAAGAGGATGCAACTGCAAAAAATCCAGCTGCCTAAAGAAATACTGTGAATGTTATCAGGTTTGCTGCACCCTTGTCCATCATCATCCCATCTTGTATGCTTTCAATTTCAGTTATAATATGAATTAAAAATGGTTTTTTTGATTTGAAAAGGGTGGTGTCGGTTGCTCCATTGGGTGTAGATGCGAAGGGTGCAAGAATGCTTTCGGCAGAAAAGATGGTAAGTTTTCAGTCAGGATCAACTAGTTAGAAATGTATTCAGCATTTCGATTGTTTCTTGAATGGTAAATAATATTCCTGTTGTTAATTGGCTTGTTATGAATTGACACAATTCCTTATTTTTGGTTCAGGTTCTGCTCCTGTAAGCATAGAAACTGAGCAAGAAGAAACGGAAACAACTGACAAGGCTATGGCAGAGAAAGCTTCACAGAAAACTGAAATTCAGAACACCGAAGATCATCCGGATTCTGCTACTATGTCAACACCATTACGACTCTCCAGGTTTGAAATGCTGACTTTTGTACAGTTGAGATGATGAACAAAAACGATGTCTCTTATTGATTGATGTTGTTTCATTTCCATGAGACAGGCCTTTGCTTCCGCTGCCCTTTTCATCAAAGGGAAAGGCACCAAGATCCTTCGTTACCACCATCTCAGGCTCTGCATTGTTTGCCAGCCAAAAGCTTGGGAAAACAAACTCTCTTTGGTCTCAATCCAAGCATTTTCAAACTGTCCCAGATGATGAAATGCCGGATATTCTCCTAGGTGATACCTCTCCTATCACATGCATTAAAACTTCTTCTCCAAATGGCAAGAGGATCTCCTCTCCCAGCTGTGACTTGGGATCATCTCCTAGTCGCAGAGGTGGCAGAAAGTTGATATTACAATCCATTCCTTCATTTCCTTCTCTCACCTCTCACCCTTAGAATGGTGTCTTTTTTTGGTTCTAAGTTAGTCTCTCTCTTCCCTGTTAATCATGTTCTTAGTTTGTTGCAATAGAAGCCACGCCTTAGTCTTTTTATATATATTGATCTCCGTTTTACTTTGGTAATAATATGTTGCATTCCTTGGATAATGTACTATTTAAGTAATAGTTATAATCATTCCCGGGGATTAATCTT