Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34018 LG10 4739360 4739908 "PREDICTED: TMV resistance protein N-like, partial "
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 4739364 missense_variant p.Leu2Ser
A/G 4739377 synonymous_variant p.Ser6Ser
T/C 4739383 synonymous_variant p.Phe8Phe
A/C 4739407 missense_variant p.Arg16Ser
C/A 4739495 missense_variant p.Gln46Lys
G/A 4739514 missense_variant p.Arg52Lys
G/C 4739516 missense_variant p.Ala53Pro
C/T 4739517 missense_variant p.Ala53Val
A/G 4739522 missense_variant p.Lys55Glu
A/G 4739523 missense_variant p.Lys55Arg
G/C 4739528 missense_variant p.Glu57Gln
C/T 4739541 missense_variant p.Pro61Leu
A/G 4739570 missense_variant p.Lys71Glu
G/T 4739572 missense_variant p.Lys71Asn
G/C 4739584 synonymous_variant p.Leu75Leu
T/C 4739588 missense_variant p.Phe77Leu
C/T 4739593 synonymous_variant p.Ser78Ser
C/G,T 4739611 synonymous_variant p.Ser84Ser
G/T 4739626 missense_variant p.Lys89Asn
G/A 4739632 synonymous_variant p.Leu91Leu
T/A 4739637 missense_variant p.Met93Lys
C/G 4739650 missense_variant p.Cys97Trp
G/T 4739658 missense_variant p.Arg100Ile
G/A 4739668 synonymous_variant p.Arg103Arg
G/C 4739674 synonymous_variant p.Val105Val
G/A 4739681 missense_variant p.Val108Ile
G/C 4739720 missense_variant p.Glu121Gln
A/T 4739721 missense_variant p.Glu121Val
A/C 4739736 missense_variant p.Glu126Ala
A/T 4739746 missense_variant p.Glu129Asp
C/A 4739756 missense_variant p.Gln133Lys
T/G 4739760 missense_variant p.Leu134Arg
G/A 4739767 synonymous_variant p.Lys136Lys
G/C 4739779 missense_variant p.Glu140Asp
G/T 4739816 missense_variant p.Ala153Ser
C/T 4739827 synonymous_variant p.Ser156Ser
T/C 4739830 synonymous_variant p.Gly157Gly
C/T 4739848 synonymous_variant p.Ile163Ile
A/T 4739849 missense_variant p.Arg164Trp
G/A 4739868 missense_variant p.Arg170His
G/T 4739880 missense_variant p.Arg174Ile
A/T 4739889 missense_variant p.Glu177Val
T/C 4739903 missense_variant p.Tyr182His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34018.1
MLGSSSSFPVSTSTTRYHVFLSFRGEDTRKNFISHLYAALQRKRIQAYIDERAQKGEEISPALQTAIEESKIYVLVFSENYASSTWCLKELTMILNCKKRYGRDVIPVFYKVDPSTVRKQEERYKEAFEEHEQLFKDDMEKVQGWKDALTEAAGLSGWDSNVIRSLYFLRPLFRYSESLFIY*


CDS Sequence:
>Vu_34018.1
ATGTTAGGAAGTTCTTCATCATTTCCAGTCTCTACTTCTACCACCAGATATCATGTGTTTCTCAGCTTCAGAGGAGAAGACACGCGTAAAAACTTCATCAGTCACCTTTATGCAGCACTGCAAAGGAAACGCATCCAAGCATATATTGATGAGAGAGCACAAAAGGGCGAAGAAATTTCGCCTGCACTCCAAACTGCGATAGAAGAATCAAAGATCTATGTCCTGGTTTTCTCCGAAAACTATGCATCTTCCACGTGGTGCTTGAAGGAACTGACTATGATACTGAACTGCAAGAAGAGATATGGAAGGGACGTGATACCGGTTTTCTACAAAGTGGATCCATCAACTGTCAGGAAGCAGGAAGAAAGATACAAAGAAGCATTCGAAGAGCATGAACAGCTGTTTAAGGACGACATGGAGAAAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGGACTCTCCGGTTGGGATTCAAACGTTATCAGGTCATTATATTTCTTACGTCCACTTTTCAGATATTCAGAATCTCTTTTCATTTACTAA


Promoter Sequence:
>Vu_34018::LG10:4737360-4739360(+)
GGAGACACCTTTCTCTGTAAATAGAAGGGTCTCATTCCTTGTAAAATCACTTGATGAATTTGAATGTTATTATGCCAAAATGTGTGCAAACATATCTTGTCTCAAGTCAAGGCTAGAGCATCCCATGAGGTCCCGTTAACCACCCTTCTCTAGAGTTGGCCCAACCTCTCCGAAGATCCATCAAACACCTCCATCTTACCACAAATACTCATCAAAACCTCACCAATATTGTGAGTCCACCACCATATCCATAACTTCCGCACAAATTCCACCTCCACAGCTTCATCTCTGCGCTTTGGCCCAACCTAGCTCGAGGAGGACGTTATCAAATAGTGTTTGCTGATTTTGCATGTATGTATAATTGAATGATTATGTATTTTGTGATATTGGTTTGAATAATTAAGTGTTATGATTGTGATGAATATGTTTCTGCATATTATGAGCAAGTGGTCGAGTGGATTGAGAGGAATTGGGTTGGTGAATCTGGGTAATCTGGATTTGGTATGAGTATGATTGGTATGAAGAATCTGGGTAAGTTATAGGATACAAGATTGGAGTATCAGAAATTAGGAAGAATGAGTAGATTTTAGGTAAACTTAAGTTTTATCATAGTTTGCAGTCATTCTACAGAATTACGTAGTTTTATTAAGGGTTCTGTTTTGACCGCTCGGTCTTTTCTTGTGTTCGGCTGTAACTGAGCTATATTTCTTTAGAGCTTCAGTTAATGATCGTTCGGTTTTACACTAGTGTTCTGTAGTACACTAGTGTTCGGTCTTACACTAGTATTCTGTAGTACACTAGTGTTCGGTCTTACACTAGTATTCCGTAGTACACTAGCATTCGGTCTTATATTTGTGTTCCTTATTACACTGGTATTCAATATTATTTAGAATTTGGTTTATATATAGTTTTCAATCTAGTCATAGTGCTCGGTATTACTCTAGTAATCGGTCTAGTTCTAGTATTAGATATCATTCTAGTGTTCGGATAATTTAATGATTAGTTATATTTGAGTGTTCTACTTAAGTCCAGAGTGTCCGGTCTGAGGTGGTGCTTTGTTTTAAGAGTTAGTATTGTGTTAGTAATTGACTTTCTACTAGGACTCAGTTATGTTGTACTCGGTATATTTTAGTGGTCGGTTCGTATAAGTGTTCGATCACCTTTTTCAGTCATACTTATTATGTATCGTTCGGTCCTCTTCTTTGGGTAGTGAGAAATCGTCCGGTCTCCAATGTCGTCAGAATGTTTAGTTTGGTATGTGGGTTACACTATATTTTAAGTTAATTATATAAACATGCTGGGTGTGATTAATGTGTGGATGTATTTTTGAGATGTTTGATGTTGAATATTTGTGAAAGTAAATAATAATAATAATTATTATTATTATAATAATATAATTATTATTATTATAATTATTATTAGTAGTATTATTATTATTATAATAATAATAATAACGACGATGATTTACAATTATTAGCAAAGAATATTTTTAACTATTTTTTAAATATGCATATTTGGTTATCGATTTTACTACAATCTATTTTATTATTATTTTTGATGAAAAACTATTTACAAAAAAAAACTATTATGTTAAATGTTTTTACCATTATAATAGTATAAATTTAATAAAAATATTTACTTTAGGACTGTTTTTTATATTAATTTTTTCGACAACTTTTATATAATTTTTAGTAATATTTTTTATTTTAATAATTATAATAATATGTCATTTTAATAGTATTTTTATCTTAATAATTATCATATTACGCAATTTTTTTATAATAATTTTTAGTAGACATATGTCCCTAAAATTATCTAAATTTAGAATCCATAAATATTCTGTAAATTGTTGAGCCTTAATTGACTTAATAGCTTAAGTTATTGCCGTATTGACGTGGCTGACCAGAACAAACAACACGCGACCGATACTTTCAGAGAGGATAGTTGCAGAGAAAACAGAGTTCTTCATAGATCTTCATCATCTTTCTAATTCATTCCAA


Gene Sequence:
>Vu_34018(+)
ATGTTAGGAAGTTCTTCATCATTTCCAGTCTCTACTTCTACCACCAGATATCATGTGTTTCTCAGCTTCAGAGGAGAAGACACGCGTAAAAACTTCATCAGTCACCTTTATGCAGCACTGCAAAGGAAACGCATCCAAGCATATATTGATGAGAGAGCACAAAAGGGCGAAGAAATTTCGCCTGCACTCCAAACTGCGATAGAAGAATCAAAGATCTATGTCCTGGTTTTCTCCGAAAACTATGCATCTTCCACGTGGTGCTTGAAGGAACTGACTATGATACTGAACTGCAAGAAGAGATATGGAAGGGACGTGATACCGGTTTTCTACAAAGTGGATCCATCAACTGTCAGGAAGCAGGAAGAAAGATACAAAGAAGCATTCGAAGAGCATGAACAGCTGTTTAAGGACGACATGGAGAAAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGGACTCTCCGGTTGGGATTCAAACGTTATCAGGTCATTATATTTCTTACGTCCACTTTTCAGATATTCAGAATCTCTTTTCATTTACTAA