Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34015 LG10 4718928 4719476 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 4718932 missense_variant p.Ala2Val
A/T 4718933 synonymous_variant p.Ala2Ala
G/A 4718951 synonymous_variant p.Leu8Leu
C/T 4718993 synonymous_variant p.Ser22Ser
G/A 4718999 synonymous_variant p.Arg24Arg
A/T 4719011 synonymous_variant p.Thr28Thr
C/T 4719015 missense_variant p.His30Tyr
G/A 4719024 missense_variant p.Val33Ile
C/T 4719036 missense_variant p.His37Tyr
C/T 4719038 synonymous_variant p.His37His
C/A 4719040 missense_variant p.Ala38Glu
A/C 4719041 synonymous_variant p.Ala38Ala
C/G 4719050 missense_variant p.His41Gln
A/G 4719058 missense_variant p.His44Arg
G/C 4719063 missense_variant p.Glu46Gln
T/G 4719073 missense_variant p.Ile49Ser
T/A 4719074 synonymous_variant p.Ile49Ile
G/A 4719078 missense_variant p.Glu51Lys
G/C 4719080 missense_variant p.Glu51Asp
A/T 4719083 missense_variant p.Arg52Ser
G/T,C 4719084 stop_gained p.Glu53*
A/T 4719085 missense_variant p.Glu53Val
A/G 4719090 missense_variant p.Lys55Glu
A/G 4719091 missense_variant p.Lys55Arg
G/C 4719096 missense_variant p.Glu57Gln
A/G 4719138 missense_variant p.Lys71Glu
G/T 4719140 missense_variant p.Lys71Asn
T/C 4719152 synonymous_variant p.Leu75Leu
T/C 4719156 missense_variant p.Phe77Leu
C/T 4719161 synonymous_variant p.Ser78Ser
C/T 4719174 missense_variant p.Pro83Ser
G/T 4719179 synonymous_variant p.Ser84Ser
C/G 4719182 synonymous_variant p.Thr85Thr
A/G 4719212 synonymous_variant p.Leu95Leu
G/A 4719242 synonymous_variant p.Val105Val
A/G 4719249 missense_variant p.Ile108Val
G/C 4719288 missense_variant p.Glu121Gln
A/T 4719289 missense_variant p.Glu121Val
A/G 4719291 missense_variant p.Lys122Glu
T/A 4719308 synonymous_variant p.Ala127Ala
T/C 4719318 missense_variant p.Tyr131His
C/A 4719324 missense_variant p.Gln133Lys
G/A 4719335 synonymous_variant p.Lys136Lys
C/A 4719338 missense_variant p.Asp137Glu
A/G 4719355 missense_variant p.Gln143Arg
A/T 4719364 missense_variant p.Lys146Met
G/T 4719384 missense_variant p.Ala153Ser
C/T 4719395 synonymous_variant p.Ser156Ser
T/C 4719398 synonymous_variant p.Gly157Gly
C/T 4719416 synonymous_variant p.Ile163Ile
A/T 4719417 missense_variant p.Arg164Trp
A/C 4719425 missense_variant p.Leu166Phe
G/T 4719448 missense_variant p.Arg174Ile
T/A 4719450 missense_variant p.Tyr175Asn
T/C 4719452 synonymous_variant p.Tyr175Tyr
A/T 4719457 missense_variant p.Glu177Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34015.1
MAESSSSLAVPTSPTKYDVFLSFRGEDTRHNFVSHLHAALHRNHIEAYIDEREQKGEEISPALQTAIEESKIYVLVFSENYAPSTWCLNELTSILNCKKRYRRDVIPIFYKVDPSTVRKQEKRYKAAFEEYEQRFKDDMDKVQGWKDALTEAAGLSGWDSNVIRSLYFLHPLFRYSESLFIY*


CDS Sequence:
>Vu_34015.1
ATGGCAGAGAGTTCTTCGTCATTGGCTGTGCCCACTTCTCCCACTAAGTATGATGTGTTTCTCAGCTTCAGGGGGGAAGACACACGTCACAACTTCGTCAGTCACCTTCACGCAGCGCTGCACAGGAACCACATCGAAGCATATATTGATGAGAGAGAACAAAAGGGCGAAGAAATTTCGCCTGCACTCCAAACTGCGATAGAAGAATCAAAGATCTATGTCCTTGTTTTCTCCGAAAACTATGCACCTTCGACCTGGTGCTTGAATGAACTGACTAGTATACTAAACTGCAAGAAGAGATATAGAAGAGACGTGATACCGATTTTCTACAAAGTGGATCCATCAACTGTCAGGAAGCAGGAAAAAAGATACAAAGCAGCTTTCGAAGAGTATGAACAGCGGTTTAAGGACGACATGGACAAAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGGACTCTCCGGTTGGGATTCAAACGTTATCAGGTCATTATATTTCTTACATCCACTTTTCAGATATTCAGAATCTCTTTTCATTTACTAA


Promoter Sequence:
>Vu_34015::LG10:4716928-4718928(+)
CATGGTTAAGCGTGCTTAGCTTGGAGTAATTAATTAAAGCTCCCACAAAATCTAGAAGAAAATCAAGTGTTACCACCACTGGGAGAATACACTCTCAAGACAAACACCAAATAGCATCGCTTTCCAATTTAATTTATCCCTTTTCAAAGAGAAATGAAAAAACATTCGTACCTTAGAGTGAAATGATGGTAGAGCTTGCAATAGTTCGGCGGCAAAGTTAGAGAGCGGAAAAACCTTGTGGGGTGATGAGCCTTCGACTGCGGAGAACCTTCGACGATGATGGTAGAGCCTTTGACAGTTTGGCTATGGCAGAGTATAGAAAAGCCTTTGACGGCGGCGGTGAAGCTTCGACAGTGGCGGCGAATCTTTCACAGCAACGAGCCTTCAATAGTGACAAGGTTTCAGCGGCGACCAATTGGAAAAAAATTGAGTCAGATGACCTAAACTCCAGTTAACCCCAATTAACAGTTAACTGTATAATAAATTCAATATTTTTAGACTGAATTGTTAAACAGTATAATTGGTTTTTAGTAAAAATAGTTTATGGTTTTTAATTGGACTGTGCCCAGCCCTAATGACAGGCTCATTGGTTTCGCTTTGTGTGTGGTTTTTGGACTATCAGTTACGAATGATATCAAAGGCAGGCGCGATTCTTTTCGTTACCGCCTAGAATTGGAAGCTGATGATGATGATACACAGATTATTTCAAATAATGATATGCTAATCAACTATTTCAATTGGAATGGTAAAGGGAGAATTGTCAATCAATATCACACATTCATGTGGAAATTCAACTTGAAGTCCCTAAGGACGAGATGCGTGTGTAATGCTCGAAGCTTCACTTTTGAGATTAGTCCGTTGCATCCTCCAGGTCGCAGACTAGTGCAGTACCAATCAGCTGTGACAATAAAAAAATGCGGCTTATGCCCTCTTTATAGAAGCGGAAGCAATGTTGGACAGTCTTCAAGGAAAACAAAGAAAGATCGGAAGAGGAAGGCCGAAAGCTACTTAGTCGGCTAGTCTCTTGCTCTTCTGCTAATTGGTCTTCCATTGGTGAGTGTGGCTTATCACCAATACTTGTTAATTAAGTTCAACTTTTATTATGAATTTCTCATTTTTAATTTATTTTGTTTTATTTAAGTTATTGTTAGATATAGTTTGATGTGGACGTAAGTTGGTTGCTCTGTTGTCCCAAATTGCATTTTTTTGAAACTCTTAAGTACGGGCTTCGTTAACTTAAAGGGAAAGAAAGGAAGATAGAAAGAGAAAGGCAAAAAGGTACTCAGTGGGCTAGTCTCTTGGTCTTCTGCTGATTTGTATTCCGTTGGTGAGTGTGGCTTATAACCAATACTCGATAATTACAAGTTTCAAAACGTTCAACTTTTATTATGAATTTCTCATTTTTAATTTTTATTTTATTTACATTTTCAATGGCATTTTGCAGGTGGGTTCCTTCAGTAGTTGACAAGATTTCTAAGATATAGTTTGATGTCGACGTTGGGTTGATCCGTTGTCCCAAAGTTGTATTTTCTTGAAACTCTTCATTTATCTGCTTCGTTAACTTCTTTAGCATATTTGGCTTTCATTTTCAGAGCTTCGTTAACTTCTTTAGCATATTTGGCTTTCATTTTCAGCGAAGGCCGTAAGTTTCACTGCCTATCAAAGATATAAATTTAGATTCCATTATTATTATGTAAATTATTGAGTCTTCAATTGACTGAATATTTCTCTTTTTGTCTAGTTGCTGCAGTGGATGATGACTCATGCTTTATTTTCTTTTGTCTAGTTGCTGTAGTGGATGACTCATGACTCATGCTTTATTATCTTTTGACTACTTTTTGTTCACAAGGTTTATTCGCATTTAGCAGAAGAAAATCCTGTGCCAATCTCGTCATGTAGCGTTCTAACTTTTCCAAAAACTAACAGCTAGATAATTTTTCTGTTCACAAACTCACTCTTCTTCCGCTGCAGTAAGAGAAAGGAGAGATAATTGATTCCAA


Gene Sequence:
>Vu_34015(+)
ATGGCAGAGAGTTCTTCGTCATTGGCTGTGCCCACTTCTCCCACTAAGTATGATGTGTTTCTCAGCTTCAGGGGGGAAGACACACGTCACAACTTCGTCAGTCACCTTCACGCAGCGCTGCACAGGAACCACATCGAAGCATATATTGATGAGAGAGAACAAAAGGGCGAAGAAATTTCGCCTGCACTCCAAACTGCGATAGAAGAATCAAAGATCTATGTCCTTGTTTTCTCCGAAAACTATGCACCTTCGACCTGGTGCTTGAATGAACTGACTAGTATACTAAACTGCAAGAAGAGATATAGAAGAGACGTGATACCGATTTTCTACAAAGTGGATCCATCAACTGTCAGGAAGCAGGAAAAAAGATACAAAGCAGCTTTCGAAGAGTATGAACAGCGGTTTAAGGACGACATGGACAAAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGGACTCTCCGGTTGGGATTCAAACGTTATCAGGTCATTATATTTCTTACATCCACTTTTCAGATATTCAGAATCTCTTTTCATTTACTAA