Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_33650 LG9 47123635 47124882 PREDICTED: ethylene-responsive transcription factor ERF053-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of response to water deprivation, regulation of response to water deprivation, positive regulation of transcription, DNA-templated, positive regulation of cellular response to heat, response to salt stress, positive regulation of transcription, DNA-templated, positive regulation of cellular response to heat, response to salt stress, regulation of response to water deprivation, positive regulation of cellular response to heat, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   cytoplasm, nucleus, nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, sequence-specific DNA binding, protein binding, protein binding, sequence-specific DNA binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 47123737 synonymous_variant p.Pro382Pro
C/T 47123907 missense_variant p.Val326Ile
A/T 47124137 missense_variant p.Met249Lys
C/T 47124423 missense_variant p.Ala154Thr
G/T 47124617 missense_variant p.Pro89His
A/T 47124733 missense_variant p.Asp50Glu
A/T 47124739 synonymous_variant p.Val48Val
A/T 47124740 missense_variant p.Val48Asp
T/C 47124833 missense_variant p.Asn17Ser
C/T 47124841 synonymous_variant p.Glu14Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_33650.1
MAATNGGKFDVGDETHNFSQKGSESVDWEIEKGNGVGSSSQRRQWKPVFDDTSISHDRPLKKIRSPDRRNTNQSSSSSSSSSVTFQPSPLSIPPSSSSRIVFPFAFNGSQYPMQFPHQFGAINSPFPHPSFQDPQQMISFGSQQQNLPFPPNMARDSSLPHHHHHQQHPQQLLQHWRDALNLSPRGMFTHLGPDGRPLFRPPTQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPEMFLNKDKNEQVEEEPSSPVQDQHEQKPVPVGRDMPREESNENDSGIGSSDATVSDEVHAAAASAEGGDGVSQELVWGEMSAWFNAIPAAWGPGSPVWDDLDPTNNLLYQSHVPFSNSNQQEMNDASDDAQRHEHNTGSGYLWKDQD*


CDS Sequence:
>Vu_33650.1
ATGGCTGCAACGAACGGTGGGAAATTCGATGTGGGAGATGAGACTCACAATTTTTCCCAGAAGGGAAGTGAAAGCGTTGATTGGGAGATTGAAAAGGGAAACGGCGTGGGTTCAAGCTCTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGATACTTCCATTTCACACGATAGACCTCTGAAGAAAATCCGCAGCCCCGATCGCCGTAACACAAACCAATCTTCCTCCTCTTCTTCTTCTTCTTCTGTTACTTTTCAACCTTCTCCTCTCTCTATCCCTCCTTCATCCTCTTCAAGAATCGTGTTCCCTTTCGCCTTCAACGGTTCCCAATACCCAATGCAATTCCCGCACCAATTCGGAGCCATAAATTCACCCTTCCCTCACCCCTCTTTCCAAGACCCCCAACAGATGATATCATTCGGGTCCCAGCAACAAAACCTTCCCTTTCCACCAAACATGGCCCGAGATTCTTCTCTTCCACACCACCATCATCATCAACAGCATCCGCAGCAACTTCTTCAGCATTGGAGAGACGCTCTGAATCTAAGTCCCAGAGGAATGTTTACCCACTTGGGGCCAGATGGAAGGCCATTGTTTAGGCCTCCAACGCAGCCCATAAACACCACCAAGCTCTACAGAGGAGTGAGGCAACGCCATTGGGGAAAATGGGTCGCTGAAATTCGTCTTCCTCGAAACAGAACGCGTCTCTGGTTGGGCACATTTGACACGGCGGAGGACGCCGCCATGGCCTACGACCGCGAAGCCTTCAAACTCCGAGGAGAAAATGCCAGACTCAATTTCCCCGAAATGTTCCTCAACAAAGACAAAAACGAACAAGTTGAAGAAGAACCTTCTTCACCTGTTCAAGACCAGCATGAACAAAAACCTGTTCCTGTAGGCCGTGACATGCCAAGAGAAGAGTCTAACGAGAATGACTCAGGAATTGGATCGAGCGACGCTACTGTGAGTGATGAGGTTCATGCAGCTGCTGCTTCTGCAGAAGGAGGTGACGGGGTTTCTCAGGAACTTGTTTGGGGAGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGCTTGGGGACCTGGTAGCCCTGTGTGGGATGATTTGGATCCCACCAATAATCTTCTTTACCAATCACACGTTCCTTTTTCAAATTCCAATCAGCAAGAGATGAATGATGCCTCTGATGATGCTCAGAGACATGAACACAACACGGGATCAGGTTACTTATGGAAGGATCAGGATTGA


Promoter Sequence:
>Vu_33650::LG9:47124882-47126882(-)
CTGATAGTAGTTGTAAATGTACATTACATTGTTGTTTTTGGAAAAAACGTCATTTGTGCTTAACTAAAGTACAAAGGTGCATTACTCACCATGTTCTTACGTACTCTCCTTGGAGGTTTGTATCTTTGATCAAAGAAAGTTAGAATGTCAAGTCCACCTTATTCCCAATTTAAATTATGATTGTGCAATCCATTTTATGCATTTTTAATATTAACAATTTGGTTAGCATAATGATTAAGATGTTAATATAAATTACTCTAAGATGTAACCTTTTTTACATAAACTAAAATTAATTTATGCACAAATTAAACATAAATTATTTAGAAAATATATAAATACAAATTAACAAATTCGTCAGTGGTGAAAAGAAACCGTATAACAATTTCAATCATCCCACAAATTCCATTAGTGAATTGTAGCTTTTTATATCTACTTATGGTTAAGCTTATATACACGTTAAAGATTATTTAACAAATACAGAAAAAAAAAGAATTATTGTATTTGGATTAAAATATTTATTTTAATGCTTGTGATAGGTTACTGCTGTAATAATTGTTAAACATGAGTGGAGGTAAATGTAAATTTGTAAAAAAAACATCAATAATTAGAAAAGGGACTAAATTGGAGAGATAATGATAATAAGCATACTTCAAGCAAGCTGCTTCAGTCAGTGAATTAAACTTTCAAAAGGAACTAACACTAGTCAGCTTTTCATATATTTATAGTATTTCTTCTCTTTCATTCTCATCTATATTCTTCTATACTTCTCAGAAAAAGACGTTTACTTTCTCTTCTTTGTATAAAAGATGAATGGAGTAAGTAAACAATATTTTTGTTTTGTTTTACGCTAGAAAACTAACACTATGCTGTCTAATCGACCACGTTGTTCAGAGCAACCTCCATGAATGTAACAAAATTTCATAAATCTTTATCTCCAGAAACTATATATATATATATATATACAAATCACTGGTTATAATTTTTTCTATTCCTGTTTAATGTTTGGACAATGATGAAAAATTTAAAAGAAACTGATAGCATGGTAATGTATATATTATTATATTTTAAAACAAGAGATCAATTAGTTTAATAGAATTTGGTAAGAACAGTTAATTATTCTATATTATTAGAAGAAACCATGATGTCAGAAGAAATTTTTGTCTTGTGTTGTTAGAATCGGCTTGAGCTGAAATGGAAGAATTCTACGGCAGATACTACATTACTTGAAAGTATAAATATCACAACATAACAAGTCTTAATACCTTTTTTCATAGTGAAAGAAATTATATAAAAGTAGTGTAAGAATGAAATTTGTGTAGAAAAAATATCTGAGCAATGATGATAACACCAATCCCCTTGGAACACATGAGGTGGAGGGACAATAGCAGAGTTATGTAACTGTTTGGTTCCAACTTGCTTTTGTTGCAACGTGTGGAATCTCAGAGTGCGTGGCTGAAAGGTGATGGAAGGTGGTAGAGCATGAAATTAAAGAAAGAGATTGGTGTTGAAGCAAAGACAGAACCGTGTGGGCTCCACTCTAGCCAACTACATCTACTATCATTTTTTCTTAAAATAAAAGTTCAACTTAAACCTCTTTCTGCCTCTCATATAAACCTCTCTCCCAAGCCTATTTTTTCCCACACAACACAATCTCCCCTGCTTTCACCATCCAGCTTTCTCTTTCTCATCTCACAACTTGCCGCATAAAAATCTCATCACAGCTTTCATCTCTGCTCGCTCTCTCTTCTTTGATTTTGCTTTTTCCACATAAAGATTGAAGATGGATAGCTCTAAAGGAAATAACTTTGGCGTCGAATTCTGTTTTTTATTTTATCAGTGTTAAAACAGAAGAAACCCAGATTCTGAAACTCCATCTTTGTTTTCTTACACTGAGCTTAGATAAATCTTTCTTTCCTGAAAACATCCATCTCGTGTTAACTTCGTCGTAAACAGGTTATACTTTTGAGAGAGCGAGCAGTGCTGTGTATTTATAAACAGTC


Gene Sequence:
>Vu_33650(-)
ATGGCTGCAACGAACGGTGGGAAATTCGATGTGGGAGATGAGACTCACAATTTTTCCCAGAAGGGAAGTGAAAGCGTTGATTGGGAGATTGAAAAGGGAAACGGCGTGGGTTCAAGCTCTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGATACTTCCATTTCACACGATAGACCTCTGAAGAAAATCCGCAGCCCCGATCGCCGTAACACAAACCAATCTTCCTCCTCTTCTTCTTCTTCTTCTGTTACTTTTCAACCTTCTCCTCTCTCTATCCCTCCTTCATCCTCTTCAAGAATCGTGTTCCCTTTCGCCTTCAACGGTTCCCAATACCCAATGCAATTCCCGCACCAATTCGGAGCCATAAATTCACCCTTCCCTCACCCCTCTTTCCAAGACCCCCAACAGATGATATCATTCGGGTCCCAGCAACAAAACCTTCCCTTTCCACCAAACATGGCCCGAGATTCTTCTCTTCCACACCACCATCATCATCAACAGCATCCGCAGCAACTTCTTCAGCATTGGAGAGACGCTCTGAATCTAAGTCCCAGAGGAATGTTTACCCACTTGGGGCCAGATGGAAGGCCATTGTTTAGGCCTCCAACGCAGCCCATAAACACCACCAAGCTCTACAGAGGAGTGAGGCAACGCCATTGGGGAAAATGGGTCGCTGAAATTCGTCTTCCTCGAAACAGAACGCGTCTCTGGTTGGGCACATTTGACACGGCGGAGGACGCCGCCATGGCCTACGACCGCGAAGCCTTCAAACTCCGAGGAGAAAATGCCAGACTCAATTTCCCCGAAATGTTCCTCAACAAAGACAAAAACGAACAAGTTGAAGAAGAACCTTCTTCACCTGTTCAAGACCAGCATGAACAAAAACCTGTTCCTGTAGGCCGTGACATGCCAAGAGAAGAGTCTAACGAGAATGACTCAGGAATTGGATCGAGCGACGCTACTGTGAGTGATGAGGTTCATGCAGCTGCTGCTTCTGCAGAAGGAGGTGACGGGGTTTCTCAGGAACTTGTTTGGGGAGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGCTTGGGGACCTGGTAGCCCTGTGTGGGATGATTTGGATCCCACCAATAATCTTCTTTACCAATCACACGTTCCTTTTTCAAATTCCAATCAGCAAGAGATGAATGATGCCTCTGATGATGCTCAGAGACATGAACACAACACGGGATCAGGTTACTTATGGAAGGATCAGGATTGA