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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_33628 LG9 46907152 46909212 PREDICTED: probable L-type lectin-domain containing receptor kinase VII.2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/T 46908484 missense_variant p.Arg445Trp
C/A 46908513 synonymous_variant p.Thr454Thr
G/A 46908713 missense_variant p.Arg521Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_33628.1
MSPLKLLVFLLHTATTLCSVSTTEFVYNTNFNSTNIILYGNASVQTSILTLTNSSFFSIGRAFYPHKIPTKKANSPTLLPFATSFIFSIAPIKNFITGHGFVFLFTSSRGVNGTTAAEYIGLFNLTNEGNPQNHVFGVEFDIVQNEEEFNDISDNHVGVDINSLRSLTSHEAGYWGGKGDKKFKVLELKNGENYQVWIEFMHSQLNVTITRAGRKKPRVPLISSNVSLSGVLMDETYVGFTAATGKIVDSTRILAWSFSNSNFSIGDALVTENLPSFVHHKRWFSEGRVLAAGVSIILCVLIIGSGFVVFFILRSRKTLEEVEDWELEYWPHRIGFHDIYAATGGFSEENVVAVGGNGKVYKGVLHGAEVAVKRIPQEREEGMREFLAEVAILGRMKHKNLVGLRGWCKKERGNLILVYDFMSMGSLDKRIFECEERMVMAWEERIKVLKNVATGILYLHEGWEVKVLHGDIKACNVLLDKDMNARLGDFGLARMHDHHGQVASTTRVIGTIGYIAPEVIRTGAVSTMSDVFGFGILVMEVICGRRSIEEHKPGLTDWIMSLMVQGQLQSAVDERLKAKWGYSTQEAERLLHLGLLCSNSDPSIRPTMRQVVKMLDGEMDNTEEENMEMSLLGKVKSAAMWSKCDFPCSGYPTFDEIKMFSLNSWTSGSGTSTFPGSESEIIIVNR*


CDS Sequence:
>Vu_33628.1
ATGTCTCCATTGAAGCTCCTTGTTTTTCTTCTTCACACTGCAACCACTTTGTGTTCAGTTTCCACTACCGAATTTGTCTATAACACAAACTTCAACTCCACAAACATCATTCTATATGGAAATGCTTCTGTACAAACATCCATTCTGACTCTCACAAATTCGAGTTTCTTTTCCATAGGCCGTGCTTTTTACCCTCACAAAATACCTACCAAAAAAGCCAACTCCCCCACTTTACTCCCCTTTGCAACCTCCTTCATTTTCTCAATTGCTCCCATCAAAAACTTTATCACTGGCCACGGCTTTGTCTTCCTGTTCACATCATCAAGAGGCGTAAATGGTACCACTGCAGCAGAGTATATCGGTCTTTTCAATCTTACCAACGAAGGCAACCCTCAGAATCATGTTTTTGGAGTTGAGTTTGATATAGTACAAAATGAAGAAGAGTTCAATGATATTAGTGATAATCATGTCGGTGTTGACATAAACTCGCTTCGCTCTTTGACTTCGCACGAAGCTGGTTATTGGGGAGGAAAAGGTGACAAAAAGTTTAAGGTGTTGGAGCTAAAAAATGGAGAGAACTATCAGGTATGGATTGAATTTATGCACTCTCAACTTAACGTTACTATAACTCGGGCAGGAAGAAAGAAGCCCAGAGTGCCTCTTATCAGTAGTAATGTAAGCCTTTCAGGGGTTCTAATGGATGAAACGTATGTTGGATTCACTGCAGCAACAGGGAAGATAGTAGACAGTACTAGGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATAGGTGATGCTTTGGTGACAGAAAATTTGCCTTCATTTGTACATCATAAAAGGTGGTTTTCTGAAGGGCGAGTTTTGGCTGCAGGTGTGAGCATTATTTTGTGTGTGTTAATCATTGGCTCTGGTTTTGTAGTTTTTTTCATTCTGCGCAGCCGCAAGACACTAGAAGAAGTTGAGGACTGGGAACTGGAGTATTGGCCTCATAGGATTGGTTTCCATGATATTTATGCAGCAACAGGAGGGTTTTCTGAAGAGAATGTGGTTGCTGTTGGAGGGAACGGGAAGGTGTATAAAGGGGTTTTGCATGGAGCAGAAGTTGCAGTGAAGAGAATCCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCCGAGGTTGCAATTCTAGGCAGAATGAAGCACAAAAATTTAGTAGGATTGAGAGGTTGGTGCAAAAAAGAAAGGGGAAATTTGATTCTAGTTTATGACTTCATGAGCATGGGAAGTTTAGACAAAAGGATATTTGAGTGTGAAGAGAGAATGGTGATGGCATGGGAAGAGAGGATTAAAGTTTTGAAAAATGTAGCCACCGGGATTCTGTACCTGCATGAAGGTTGGGAAGTTAAGGTCTTGCATGGGGACATCAAAGCGTGCAATGTTCTTCTTGACAAAGACATGAATGCAAGGCTGGGAGATTTTGGATTGGCTCGTATGCATGATCATCATGGACAAGTTGCCAGCACAACAAGAGTAATTGGGACAATAGGATACATTGCTCCTGAAGTGATTCGAACAGGAGCAGTGTCAACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTGATGGAAGTAATTTGCGGGCGAAGATCAATTGAAGAACATAAACCAGGTCTTACTGATTGGATAATGTCTCTAATGGTGCAAGGCCAATTGCAAAGTGCTGTTGATGAAAGGTTGAAGGCTAAATGGGGATACAGCACACAGGAAGCTGAAAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGACCCTAGCATTCGACCAACGATGAGGCAGGTGGTGAAAATGTTGGACGGGGAAATGGACAACACTGAGGAAGAAAACATGGAGATGAGTTTGCTTGGAAAAGTAAAATCAGCTGCAATGTGGTCTAAATGTGATTTTCCATGCAGTGGTTACCCAACATTTGATGAAATTAAGATGTTCAGTCTCAATTCTTGGACCTCTGGAAGTGGCACAAGCACTTTTCCAGGATCAGAATCAGAAATCATCATAGTAAACAGATAA


Promoter Sequence:
>Vu_33628::LG9:46905152-46907152(+)
GATGGGATTTTATACCTACACGAGGGTTGGGAAGTTGAGGTCTTGCATAGGGACATCAAAGCTTGTAATGTACTACTTGACAAGGACATGAATGCTAGATTGGGGGATTTTGGGCTTGCAAGGCTGCATCGCCAGGAACATGTGGCTGACACAACAAGAGTGATAGGGACTCTGGGGTACATGGCACCGGAACTAGTTCGAATTGGGAGACCCACAGCTGCGTGTGATGTGTTCAGCTTTGGAGTATTGGTTCTAGAAGTGGTGTGTGGGAGAAGACCCGTCATAGCAGATCAGCCACCATTGTTTGATTGGGTATTTTCCCTTATGGAGAAAGGGGAGTTGAGTTGTGCTATTGATGAGCGTTTGAAGGGTCAAATTGGTTATAATGCTGAAGAAGCTGAGAGGATGCTTCATTTGGGTTTGTTATGTGTAGGTAATGACCCTGTTGCTAGGCCAACAATGAGGCAAGTGGTGAAAACATTGGAGGGAATAAAATGCACTGAATGCAATGACGAGTGCATCCATTTGGGTCTGCTTGGAAAAATAAACTCAGCAGCATCATGGTCTAAAAGTTCTACAAGTTCTTCCTATGTAAATTATCCTACCTTTGATGAGATTTTGCAGACCAAGTTTTATTCTACTGCATCTTTAAGCATCTCTTATCCCAGCCCACAGCCACAGTCAGAGTTTGTCTCAGAAGGAAGGTGAGAGCTGCAATTGATTCAATCACTATGTTGATATTGAAATGGCAAAGAGCTAATGCAGCTGTGATCAAGTGACAAACATTTGTAAAGTTCGAGCACTTGTTGCTCCAAAAGTCAAGTTATGCTAAAATAGTGATCTCAAGTCTCAACGACTGATGTTGCTAAGTTGGGGTGTTTTTTTTTCCTCTGCTGTGCCATAATTTTATTTTATTTTTCAAATTTCTTTCTTTGGTGTTCTAGTTCTTTGAATAGTACTCATGTTCAACGTTCTTTCTTTGACAAATCTTGAATGAAACAAAAAATTTAATCTATACGTGGTGTCTTCATTTTCTGTATTTATTACATCTGAAACAGTGTTCCTTGCAAATATTAGTTATTTCATTTCATTCCAACACATTTTTACATGATTACAGCATACGACGACTTTTGGCAACTTTTATGTCAGAGTTCTTGCTGTTATTATTTTTTCAACGACAGAAACACATGACTTGAAGATACTCGTGTGTAGCAAATAATTACGTTCTATTTCCCAATAAATGATAAATGAAGCTGATATGGAATCTATTTCCCTGTTCCTCTTTATTTCCATTGCCTCTTTGAAAAGAGTGAAATAAAGAGAAGAAAATTGGAGTTGGAAAATGACAACGATATTGCCACTATTAACTCTACCTCGTGATATTGTCACTATTAACTCTGCTTTTTCTTTTCTTCTCTTCTCTGTTCTAAGTCTTACAAAGCACACCCAAATATACCATCTAGGACCAAGCACATCCAAGTATCTCATATATGCAGGACAAATATTTAAGACCAGGCACACCCAAGTATCTCGTGTATGCAGGTCAAATATCCAAGACCAAGCACACCATGTATCTCATGCGTGTAAGACAAATATCTAAGACTAAGACTGGTTTGGGATTGGTGATTATTGGCTGTATTGCTGAGATGATGACGATATCTAACACAAATTTAATTTAAAATTGGTTGAAAATAACTTATAAAATATTATAGCAATACTTCAACAAATATTCACTTTCTTATAAACACTTGTAAGATATTTTTCAACCATACACGTCTTGATCACCTTAGTGGTCCTTAGTGGTCCTTTTCCTAAGAAATAAATGCAAATTTCCATGACACGTTGAATTGACAATAAATAACAATAACCTGCGTAGGCCGTAACCAAGCTAGCTCCCCTCTTGCTTTTGAAGGGCTAAGCAGAGCTGAAGATTCACATATATATGTAGCAGCCAAGTTCAATTGGGCAAAGTTTTCCTTCCATTTTCAGTCCCTTGCCAA


Gene Sequence:
>Vu_33628(+)
ATGTCTCCATTGAAGCTCCTTGTTTTTCTTCTTCACACTGCAACCACTTTGTGTTCAGTTTCCACTACCGAATTTGTCTATAACACAAACTTCAACTCCACAAACATCATTCTATATGGAAATGCTTCTGTACAAACATCCATTCTGACTCTCACAAATTCGAGTTTCTTTTCCATAGGCCGTGCTTTTTACCCTCACAAAATACCTACCAAAAAAGCCAACTCCCCCACTTTACTCCCCTTTGCAACCTCCTTCATTTTCTCAATTGCTCCCATCAAAAACTTTATCACTGGCCACGGCTTTGTCTTCCTGTTCACATCATCAAGAGGCGTAAATGGTACCACTGCAGCAGAGTATATCGGTCTTTTCAATCTTACCAACGAAGGCAACCCTCAGAATCATGTTTTTGGAGTTGAGTTTGATATAGTACAAAATGAAGAAGAGTTCAATGATATTAGTGATAATCATGTCGGTGTTGACATAAACTCGCTTCGCTCTTTGACTTCGCACGAAGCTGGTTATTGGGGAGGAAAAGGTGACAAAAAGTTTAAGGTGTTGGAGCTAAAAAATGGAGAGAACTATCAGGTATGGATTGAATTTATGCACTCTCAACTTAACGTTACTATAACTCGGGCAGGAAGAAAGAAGCCCAGAGTGCCTCTTATCAGTAGTAATGTAAGCCTTTCAGGGGTTCTAATGGATGAAACGTATGTTGGATTCACTGCAGCAACAGGGAAGATAGTAGACAGTACTAGGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATAGGTGATGCTTTGGTGACAGAAAATTTGCCTTCATTTGTACATCATAAAAGGTGGTTTTCTGAAGGGCGAGTTTTGGCTGCAGGTGTGAGCATTATTTTGTGTGTGTTAATCATTGGCTCTGGTTTTGTAGTTTTTTTCATTCTGCGCAGCCGCAAGACACTAGAAGAAGTTGAGGACTGGGAACTGGAGTATTGGCCTCATAGGATTGGTTTCCATGATATTTATGCAGCAACAGGAGGGTTTTCTGAAGAGAATGTGGTTGCTGTTGGAGGGAACGGGAAGGTGTATAAAGGGGTTTTGCATGGAGCAGAAGTTGCAGTGAAGAGAATCCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCCGAGGTTGCAATTCTAGGCAGAATGAAGCACAAAAATTTAGTAGGATTGAGAGGTTGGTGCAAAAAAGAAAGGGGAAATTTGATTCTAGTTTATGACTTCATGAGCATGGGAAGTTTAGACAAAAGGATATTTGAGTGTGAAGAGAGAATGGTGATGGCATGGGAAGAGAGGATTAAAGTTTTGAAAAATGTAGCCACCGGGATTCTGTACCTGCATGAAGGTTGGGAAGTTAAGGTCTTGCATGGGGACATCAAAGCGTGCAATGTTCTTCTTGACAAAGACATGAATGCAAGGCTGGGAGATTTTGGATTGGCTCGTATGCATGATCATCATGGACAAGTTGCCAGCACAACAAGAGTAATTGGGACAATAGGATACATTGCTCCTGAAGTGATTCGAACAGGAGCAGTGTCAACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTGATGGAAGTAATTTGCGGGCGAAGATCAATTGAAGAACATAAACCAGGTCTTACTGATTGGATAATGTCTCTAATGGTGCAAGGCCAATTGCAAAGTGCTGTTGATGAAAGGTTGAAGGCTAAATGGGGATACAGCACACAGGAAGCTGAAAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGACCCTAGCATTCGACCAACGATGAGGCAGGTGGTGAAAATGTTGGACGGGGAAATGGACAACACTGAGGAAGAAAACATGGAGATGAGTTTGCTTGGAAAAGTAAAATCAGCTGCAATGTGGTCTAAATGTGATTTTCCATGCAGTGGTTACCCAACATTTGATGAAATTAAGATGTTCAGTCTCAATTCTTGGACCTCTGGAAGTGGCACAAGCACTTTTCCAGGATCAGAATCAGAAATCATCATAGTAAACAGATAA

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