Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_33626 LG9 46885949 46887823 receptor-like serine/threonine-protein kinase At2g45590
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 46885951 missense_variant&splice_region_variant p.Val283Ala
C/T 46885968 synonymous_variant p.Leu277Leu
C/A 46885996 missense_variant p.Arg268Ile
A/G 46886001 synonymous_variant p.Val266Val
G/A 46886026 missense_variant p.Ala258Val
G/A 46886034 synonymous_variant p.Ser255Ser
C/T 46886038 missense_variant p.Arg254Gln
G/T 46886042 missense_variant p.Gln253Lys
G/A 46886048 missense_variant p.Pro251Ser
T/A 46886082 synonymous_variant p.Arg239Arg
T/C 46886090 missense_variant p.Asn237Asp
C/T 46886106 synonymous_variant p.Gln231Gln
C/G 46886118 missense_variant p.Trp227Cys
C/T 46886122 missense_variant p.Cys226Tyr
C/T 46886142 synonymous_variant p.Arg219Arg
G/A 46886163 synonymous_variant p.Arg212Arg
C/T 46886171 missense_variant p.Val210Ile
G/A 46886185 missense_variant p.Ala205Val
T/C 46886196 synonymous_variant p.Arg201Arg
C/T 46886197 missense_variant p.Arg201Gln
A/G 46886201 missense_variant p.Ser200Pro
T/A 46886213 missense_variant p.Arg196Trp
T/C 46886215 missense_variant p.Gln195Arg
A/G 46886222 missense_variant p.Ser193Pro
C/T 46886231 missense_variant p.Ala190Thr
C/T 46886268 synonymous_variant p.Pro177Pro
C/T 46886274 synonymous_variant p.Ala175Ala
G/A 46886275 missense_variant p.Ala175Val
C/A 46886276 missense_variant p.Ala175Ser
G/T 46886284 missense_variant p.Ser172Tyr
G/C 46886292 synonymous_variant p.Thr169Thr
C/T 46886297 missense_variant p.Ala168Thr
G/T 46886298 synonymous_variant p.Thr167Thr
G/A 46886313 splice_region_variant&synonymous_variant p.Asp162Asp
G/T 46886327 intron_variant
G/A 46886340 intron_variant
C/T 46886349 intron_variant
G/A 46886369 intron_variant
G/A 46886372 intron_variant
G/C 46886385 intron_variant
C/T 46886424 intron_variant
C/T 46886426 intron_variant
G/A 46886441 intron_variant
A/G 46886444 intron_variant
T/C 46886448 intron_variant
G/A,* 46886461 intron_variant
A/G 46886469 intron_variant
A/T 46886527 intron_variant
G/A 46886548 intron_variant
G/A 46886555 intron_variant
C/A 46886577 intron_variant
A/G 46886585 intron_variant
C/T 46886588 intron_variant
T/C 46886629 intron_variant
C/A 46886644 intron_variant
G/A 46886655 intron_variant
C/A 46886692 intron_variant
A/G 46886727 intron_variant
G/A 46886744 intron_variant
T/C 46886798 intron_variant
G/A 46886816 intron_variant
T/C 46886854 intron_variant
T/G 46886975 intron_variant
T/A 46887186 intron_variant
C/A 46887297 missense_variant p.Glu146Asp
C/T 46887441 missense_variant p.Gly128Asp
C/T 46887719 synonymous_variant p.Leu35Leu
C/A 46887724 missense_variant p.Gly34Trp
G/A 46887778 missense_variant p.Pro16Ser
C/T 46887785 synonymous_variant p.Arg13Arg
T/C 46887797 synonymous_variant p.Ala9Ala
C/T 46887803 synonymous_variant p.Gln7Gln
A/G 46887820 missense_variant p.Ser2Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_33626.1
MSNQSLQDALLDRRCPELMCWGKRFDIVVSMAMGLEYLHHACEPLVIHGDIKPSNVLLDEDFGVKIGDFGLDRVKAVEDLGMVEEKKEGVVEIAVEEFGVMEEGESVSVVDVDRSLESCLVRVVDYSGASSVGVIRGIGSGGRRVGRGEFGRVKDYVMEWIGTASRTPQPPDLGLRSRSLCFSYEPGSISLEDLARGSSAHDEDLRRRTAFFAGGGEAIGDGEAEAVGEGRRSSGALIGESGAVPGLVPLLRCSDPWTQEHAVTALLPEDLQPTVKICVDGLR*


CDS Sequence:
>Vu_33626.1
ATGTCGAACCAGAGTTTGCAGGACGCATTGTTGGACCGGCGGTGTCCGGAGCTGATGTGTTGGGGGAAGAGGTTTGACATTGTCGTTTCGATGGCGATGGGGTTGGAGTATTTACACCACGCGTGTGAGCCTCTAGTGATTCATGGGGATATAAAGCCGAGTAATGTGTTACTGGATGAGGATTTTGGAGTGAAGATTGGGGATTTTGGGCTTGATAGGGTTAAGGCGGTGGAGGATCTAGGAATGGTGGAGGAGAAGAAGGAAGGGGTTGTGGAAATTGCGGTCGAGGAGTTTGGGGTGATGGAGGAGGGGGAGAGTGTGAGTGTGGTGGATGTTGACCGGTCGTTGGAGAGTTGTCTTGTGAGGGTTGTCGATTACTCGGGCGCGTCGTCGGTGGGGGTGATAAGAGGGATTGGTAGTGGAGGCAGGAGAGTGGGGAGGGGGGAATTTGGGAGAGTGAAGGATTATGTGATGGAGTGGATTGGGACTGCAAGCAGAACACCGCAACCACCAGATCTGGGTTTGCGCTCCCGATCTCTATGCTTCTCCTACGAACCTGGAAGTATCTCGCTGGAGGATCTCGCCAGAGGATCTTCAGCTCACGATGAAGATCTGCGTCGACGGACTGCGTTCTTCGCTGGTGGCGGTGAAGCGATCGGCGACGGCGAAGCTGAGGCTGTTGGCGAAGGACGCAGGAGCAGCGGTGCCCTAATTGGCGAGTCTGGTGCGGTGCCCGGTCTGGTTCCGTTGCTCCGGTGCAGCGATCCGTGGACGCAGGAGCACGCGGTCACGGCGTTGTTGCCAGAGGATCTTCAGCCCACGGTGAAGATCTGCGTCGACGGACTGCGGTAG


Promoter Sequence:
>Vu_33626::LG9:46887823-46889823(-)
TTACTTTTCGAGATGAATTAACTATGTTATGTGAGTAACATAGCATGTTTTCCTCCCAATAATATTCTTTCAACAGTTGCACTTTTCTGTATATAATAATTTGAATTTTTTTTTCTTTCCTCTTTTTTCACTCACTAGATAGATTTTATTATTTTCACCTTTTAATACAAGTTTTATTTTTTCTATTTTAACCTTTCTGAAAAAGACAACAACTTTATTTTAAGTTTAACTATATATTTGTTCATTGTATTTGTTAGATTGGTTCAATTTCCTTTTGCATTTCTTTTTTTGGTTAATTAAGTTTTTATTTTTCTTAAAATTAATTTAGATTAAAATTTACATCGTGTCGATATATATAGTGTCTTTACCTGTTACGTGTCAATTTGTAATATTTTAAATTATTTTAATTTTTTTTAATTTTATTTTGTTTTCTAAAACGAACATAAATGTTAAGTCATTATTGTGGCATGTGATAATAATAATGTTTTTATTGTTGCATAACAATGTTATCACGTATTAATTTTATTGTTGCATAACAATGTTTTTTTTCAATTTAATTCATATTGATTCAACCTTTTTTTTAAGTAGAGTAATTTGGTCCATCTCGAATTTGAGACCAAATTAATAATTACTTTTAATTACAACTTAGGTATAATAATCTTTTAAAATTTATACATTAAATCATTCTGATTAAATATTTAAATTAAATTTTGTTTTACATTTTTACATAAAGAATATCTATTTAAACTTATATTTTAAAAAAAATAATAAAAAATGTAAATGTAAAGTGACACATTAATTTTAAAAAATTTATATTTGTCACATTAAAAATTTAAAAATTACAAATGTCATTTTACATTGATGTTATTAATATTTTTACAAAATTATAAGTTGAAAAAAGGTTTTTTTTTTTCATGTAAAAAATTAATTTGAATATTTAAGTAGAATAATTTAATAATAAATTCTAAAAAAATTAACATGTATATTTAAATTGTAATTAAGTTAATTACTAATTTTTATACGTGTCATTTAGTTTGATAGTTCAAAATAGGTTAACAATGTCTATATAAGTGTGGTTCAGGTCTTTGTATTTGACTGAACATAGAAAATCTTTCTGTATTTTTTACGCCTTTATAAATACGTCTTACCTTGTTTTCTTCTCTGTGCTTCAATGATATATTCCAATATGTATCAATAAAAATAAAAATAAAATTGATATAAAAAACTCCATTTTTGGACAATTTTCTTTTTAATATTTTGAGAAGGAAAAGAGTTTCTAATTTTAGTTTATTTATAAGAGACCTTTTATAAAATATAGATACAAAAGTTATTTTTTTAACTTATAAATAAGTTAGTTTTATGAAGAAAAAAAAACTATTTTCTTATTTTTTTAATAGGTTTAATTATTTCGGACAATCCAATTTGTGCATAATCGTCTCAAATTGGTTCTCGTATTTTGAATGTAATTAGGTCCCTTTTTGTGAAAAATTGAATCAATTTGGACATCGCCATTAATTGGGATGGACGACGTTAAAATTTGTGCTTCGTGGCTTGGTGATTGAGCAAATTTTATTGACGTGGCAGAGTTTGGTGGTATGAGGTGGATTATTTTTATTAACAGTTTTAAAAAACTTTAATTTTATCAAAACACAACGTTTTAATTAGGGAAATATGATTAAAAGTTAGAGATATGTGGTTTGCTTCTTCACTGCGTGGCAAATTGGGGAAACTTTCTTACAACCGAACGACGTTGTTTAAGCACAACCAGTGACGAAGCTCGGACACGGAGGGTTCGGTCCGGTTCACTTCACAAAGCGACTTTGCCTTCCGGCCAGACCGTGGCGTTGAAGGTTATGGACTTGCCCGGGTCAATCTAGGGTGAGAGAGAGTTCCACAACGAGTTGACGCTGTGTTTGAATCTGAAGTTGCCATTTCTTATTTCATTGCTTGGTTTTTCTTCGAACCGACGCGGTCGGAAGCTAGTTCTGGTTTACGAGTTG


Gene Sequence:
>Vu_33626(-)
ATGTCGAACCAGAGTTTGCAGGACGCATTGTTGGACCGGCGGTGTCCGGAGCTGATGTGTTGGGGGAAGAGGTTTGACATTGTCGTTTCGATGGCGATGGGGTTGGAGTATTTACACCACGCGTGTGAGCCTCTAGTGATTCATGGGGATATAAAGCCGAGTAATGTGTTACTGGATGAGGATTTTGGAGTGAAGATTGGGGATTTTGGGCTTGATAGGGTTAAGGCGGTGGAGGATCTAGGAATGGTGGAGGAGAAGAAGGAAGGGGTTGTGGAAATTGCGGTCGAGGAGTTTGGGGTGATGGAGGAGGGGGAGAGTGTGAGTGTGGTGGATGTTGACCGGTCGTTGGAGAGTTGTCTTGTGAGGGTTGTCGATTACTCGGGCGCGTCGTCGGTGGGGGTGATAAGTTGAGTGTGGTGTTGGATGGGTGCTTTGAGAGTGTTGATAGTGAGAATGTGAATTTGAATAAGAAGAATGGTGGTGGTGGTTCAAGGAGGGATTGGTAGTGGAGGCAGGAGAGTGGGGAGGGGGGAATTTGGGAGAGTGAAGGATTATGTGATGGAGTGGATTGGGAGTGAGATTAAGAAAGAGAGGCCCATGGGAAATCTGATTAAAAGTTGTGTTTTGATTAAATTAAAGTTTTTTAAAACTATAAATAAAAATAATCCACCACAGGCAACAAAAATTTGCAGCTCAGTCACCAAGCCACGAAACACAATTTTTAACGTCATCCATCTCGGCGAGATTCAAATTGATTCATTTTTTCACAAAAAAAGACCTAATTGAAAACATTCAAAATACGAAAACCTACTTGAACGCACTAGTAAAAAAAGAGTCTTCTGACGCGTAATATACGCTTCGGTTACTACGAAACCGAAGCGTATAAGAACGCGATGGCATTAACGTAAATATAAAAACCTTATACGCTTCGGTTAAACATCAACCGATGCATATTATCTTTACTGCTTCAGTTAAATGGGGCAAACGATACCTATAAAGTCTACTGTCACATCCATCTGCAATCAAACTTTTCTTTGACAACTTTATAGAATGGTTCTTCTGCTTCGGTTCACCCTATACCCGAGGCTTATACCCTTTTGCTTCGGTTTTTCAAAGACCCGAGGCAGTATTGTGTGCCAAGATCCAACTATAGTGCCTCGGTAACGATCTTTCTGCTTCGGTTGAACTTAGACCAAGACATATAATGTTATTTTAATATTTTTTTAATGGTTTAGGCATCGGTTTTGCGGTGTTACCGAAGGGGTAGCCCTTTCCCTGGTTCAAATTCCAGAAATCTGAAGTCACAGTTTTTCTTCCTCGTGCTCGTTTCTTCTTTTCTCTCTCGCGCTTTCTTTTTCTCCGCTGGTGCCTCCCTACTGTCGCCGCCGCTTCCTCCAGTGATTTCTTTGCTGCCTACGAGCTTGTTGGGAAACCGGTGCCTAAACCACCCCCTACGCCTTCATCTCGCACGACCGTTCCTCTTCCATTTCACTTTTCTTTCTTCCTAAAGCTGCAAGCAGAACACCGCAACCACCAGATCTGGGTTTGCGCTCCCGATCTCTATGCTTCTCCTACGAACCTGGAAGTATCTCGCTGGAGGATCTCGCCAGAGGATCTTCAGCTCACGATGAAGATCTGCGTCGACGGACTGCGTTCTTCGCTGGTGGCGGTGAAGCGATCGGCGACGGCGAAGCTGAGGCTGTTGGCGAAGGACGCAGGAGCAGCGGTGCCCTAATTGGCGAGTCTGGTGCGGTGCCCGGTCTGGTTCCGTTGCTCCGGTGCAGCGATCCGTGGACGCAGGAGCACGCGGTCACGGCGTTGTTGCCAGAGGATCTTCAGCCCACGGTGAAGATCTGCGTCGACGGACTGCGGTAG