Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_33620 LG9 46829669 46830511 PREDICTED: transcription factor bHLH36-like isoform X2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/C 46829753 synonymous_variant p.Thr192Thr
G/A 46829754 missense_variant p.Thr192Ile
A/T 46829772 missense_variant p.Val186Glu
T/C 46829782 missense_variant p.Ile183Val
G/A 46829795 synonymous_variant p.Phe178Phe
A/G 46829831 synonymous_variant p.Ser166Ser
T/A 46829862 splice_region_variant&intron_variant
A/C 46829903 intron_variant
T/C 46830185 synonymous_variant p.Leu77Leu
G/A 46830187 synonymous_variant p.Leu77Leu
G/A 46830210 missense_variant p.Thr69Met
A/G 46830292 downstream_gene_variant
A/G 46830347 downstream_gene_variant
A/T 46830376 splice_region_variant&intron_variant
A/C 46830456 missense_variant p.Val19Gly
T/G 46830473 missense_variant p.Lys13Asn
T/A 46830474 missense_variant p.Lys13Ile
G/T 46830486 missense_variant p.Pro9His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_33620.1
MDEQHESQPSSTKVDRKIVEKNRRSQMKNLYSELNSLLPSYNPNQVVAVPDQIDEATEYIKRLEEKVKTAKEKKERLMESKRSGSGLSSGFETRGSEKPPKMEIHVKGSVLQVILTCGVDNHFVFCEIIRILREENVEVITTSYTIVGDSVIHVVHGEVGQSMIHSGASKVSEKLKWFLNGSISNVEMEPGTLWGSEIGATLPWVLLDPTPHNALQPNP*


CDS Sequence:
>Vu_33620.1
ATGGATGAGCAACACGAAAGTCAACCTTCTTCAACCAAAGTCGACAGAAAGATTGTAGAGAAAAACAGGCGAAGCCAAATGAAGAATCTTTATTCTGAACTCAACTCTCTTCTCCCTAGTTATAACCCCAACCAAGTGGTGGCAGTGCCTGATCAAATAGATGAGGCGACGGAGTACATCAAAAGGCTGGAGGAAAAAGTGAAGACGGCGAAGGAGAAGAAAGAAAGGCTAATGGAAAGTAAGAGAAGTGGAAGTGGTTTATCGAGTGGTTTTGAAACAAGAGGAAGCGAAAAGCCGCCAAAAATGGAGATTCATGTAAAGGGTTCTGTGCTTCAAGTCATTCTAACATGTGGGGTCGATAACCACTTTGTTTTCTGTGAAATTATCAGAATATTGCGTGAAGAGAATGTTGAGGTAATCACTACCAGTTATACAATTGTTGGAGATTCAGTGATTCATGTCGTGCACGGGGAGGTTGGGCAATCTATGATCCATTCTGGAGCTAGCAAAGTGAGTGAGAAGCTGAAATGGTTCCTAAACGGATCCATCTCTAATGTAGAAATGGAGCCTGGAACCTTATGGGGTTCTGAAATTGGAGCTACTCTTCCATGGGTTCTTCTAGATCCTACCCCACACAATGCCTTACAACCAAATCCTTAG


Promoter Sequence:
>Vu_33620::LG9:46830511-46832511(-)
TCAGTTTAATCTAATTGTTAATGAAATGAGTATCCCAATTTTTCCAAGATTACTTAGAATCCAACCCTAGTGAAAGGTTGGTTCAACCAACAAGCAAACATTTCTTCATAATTTTGATCCTAACCTAGAAAAGGACTAGCTCGTTCAACAAGGCATAAACTAGACATGAAATTCTTCATAATAAAAAGTATCCCAAACCCTAAAAGAGTGTTTTTGTTATCAATAAAAAAAAGTAAATACATTAATTATAATAAATGAATAAATAAATGATAAAATATAATATAATTAAAATAACAATAAAAATTAGAAGATAATTTCTTTTTAATCAACTCCTTTTTTATTTAAGTGGGTTTTCGTGAACTCAAAAATCATATCACTGAATTCAGGTTATATAGCCATGATTAAGGATCTGGTCTTTTTGGCAAACTCACATCACCTCCCAACTCATATTTTTATGCATAGATAGAAGTAACGTCAACCTTTAATAACTTACATACTTAAAAAGTATCCGTTTCTTAAGATGTAAATGATTAATGTTTTTAAGAACTTATTTCAAGATACAATAAGATTTTTTTAAATGTTTCTAATTAAGAAATTCAAAACTAAAAATCAAATTTATAAGAAGGATTGATTTTTTCTGAGAAACTTCTCAGGTGCATGGTGGACGGATTTTTTCTGCTCCGGTAAAGAAGGAACACGCCGAAAAGGAGGACAAAAACCAGTTTTTTAATAATCCTGTTTTCACAACATGCTTCTACTTATATATAAACCCCTTACTATACAAAATAATAATGTAAGAATTAAATTCCCAAATTAAAGAGACAACTCTACACCCTTCTAGCAAAACCCCTCCACAAGGTAAAAGTAACTTCGTTTATGTCTTGTATGTTTCCACATTAGTCACAAAATTCAGCTAAAAAAATTAGTACACATGATCCAATATGAAAATGAAATTACAAAATAGGTTTAATATATAATTTTAATTTCTAAACTTATATCCAAATTCAAATTTGTATGTTTTAAACTTGTTATATTTTGTTTTTTAAACTTAAAAATAAATGTATATAATTCTTTCAATCTAATTATCTTAAATTTTTTTATTTTGTACTTGTCAAATATATTTCCTTTGATATTTAAATCGTGTAACCTTTTAACACCTTACAACTTAATTGTTAATATGAAACTCTAATTTAATAAGTTTTAAAAAAATAATGTCGTCAGTTAAAAAAAATGTATCAAAATTTAAACTTAAAATATAGATAATTTTCAAAGGCTAAAATCCTATTTTGATCCTCTAATTTTTATAAAAAGTTCTATTAGACTTTTAATTTTTTGGTTCAATTTATTCTTAAATATTTTAAAGATGCTCCTATTAAGTAATTTTCGCTATATTAACATTACATTTCTGTTAAAGTTTATATATCAAATCACTTTACTAAAAAATAAAATTAATTTAAATATTTAAATCTTTTAGATAAGGTGATTTAATATAAAAATTCTAATATAACAAAAATGACCGTGAATATTTATAAAAATTAAAAAAAGTTAAATTGAATGAAACAAAAATTAAGAATTTAATTACATTTTCATAAGAATTAAAAGAGAAAAATAATATTTTAACCAATTTTTAAAATATATTTAGAAACCAGAAAAGATAATTCGTATAAAAAAGTTTCACATGGATGATTGCGGTCGAAGTTCACAGTATCGAGGACCTACAGCAGTCATAGTTTGGTAAAATGAGATGCACAACACTGACTTTAGGTGTGAATTTGAAGATTTAAACACAGCCGAAAAACAAGCCCTGCATCACGCCTACGAAAAATAATGATGTTTCTCAAGTGACGACAGCTTTCTATTTCGGTCTCATATATACCTCTATCATCATTAGACTGACTGTCGCTAAATCCTATCATAAACATAATACCTTTTACTATAAATACAAACCTAAGGAAGCATCTTCTCACAACCCTAATTTCTAAATATAAAAACTCAAGATC


Gene Sequence:
>Vu_33620(-)
ATGGATGAGCAACACGAAAGTCAACCTTCTTCAACCAAAGTCGACAGAAAGATTGTAGAGAAAAACAGGCGAAGCCAAATGAAGAATCTTTATTCTGAACTCAACTCTCTTCTCCCTAGTTATAACCCCAACGTCTGTTTTTTGTTTTGTTTATCCATAAAACCTGAAAACTTTTTATATTATGTGATGAATACTGATATGATGTAGTTTTTTGATGAATTAACTCAGCAAGTGGTGGCAGTGCCTGATCAAATAGATGAGGCGACGGAGTACATCAAAAGGCTGGAGGAAAAAGTGAAGACGGCGAAGGAGAAGAAAGAAAGGCTAATGGAAAGTAAGAGAAGTGGAAGTGGTTTATCGAGTGGTTTTGAAACAAGAGGAAGCGAAAAGCCGCCAAAAATGGAGATTCATGTAAAGGGTTCTGTGCTTCAAGTCATTCTAACATGTGGGGTCGATAACCACTTTGTTTTCTGTGAAATTATCAGAATATTGCGTGAAGAGAATGTTGAGGTAATCACTACCAGTTATACAATTGTTGGAGATTCAGTGATTCATGTCGTGCACGGGGAGGTTAGTATATATATCTATGTCTTAATTCATCTTTAAAATAAAACCATGAAGAAATCTATAACCATTTTTCTCTATTTCAATACTTAGGTTGGGCAATCTATGATCCATTCTGGAGCTAGCAAAGTGAGTGAGAAGCTGAAATGGTTCCTAAACGGATCCATCTCTAATGTAGAAATGGAGCCTGGAACCTTATGGGGTTCTGAAATTGGAGCTACTCTTCCATGGGTTCTTCTAGATCCTACCCCACACAATGCCTTACAACCAAATCCTTAG