Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_33337 LG9 39740673 39742279 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of salicylic acid mediated signaling pathway, regulation of transcription, DNA-templated, regulation of response to water deprivation, defense response to bacterium, response to osmotic stress, regulation of jasmonic acid mediated signaling pathway, regulation of response to osmotic stress, negative regulation of leaf senescence, regulation of response to water deprivation, regulation of response to water deprivation, regulation of brassinosteroid mediated signaling pathway, regulation of response to osmotic stress, response to osmotic stress, defense response to fungus, defense response to bacterium, response to reactive oxygen species, regulation of ethylene-activated signaling pathway, defense response to fungus, regulation of salicylic acid mediated signaling pathway, regulation of salicylic acid mediated signaling pathway, response to salicylic acid, regulation of ethylene-activated signaling pathway, regulation of ethylene-activated signaling pathway, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of jasmonic acid mediated signaling pathway, regulation of jasmonic acid mediated signaling pathway, regulation of ethylene-activated signaling pathway, regulation of transcription, DNA-templated, regulation of stomatal closure, regulation of brassinosteroid mediated signaling pathway, regulation of brassinosteroid mediated signaling pathway, defense response to bacterium, regulation of ethylene-activated signaling pathway, regulation of salicylic acid mediated signaling pathway, regulation of defense response, regulation of jasmonic acid mediated signaling pathway, defense response to fungus, regulation of jasmonic acid mediated signaling pathway, response to reactive oxygen species, regulation of brassinosteroid mediated signaling pathway, negative regulation of leaf senescence, regulation of brassinosteroid mediated signaling pathway
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
G/A 39740679 missense_variant p.Leu279Phe
A/T 39740680 synonymous_variant p.Val278Val
G/C 39740712 missense_variant p.Arg268Gly
G/C 39740729 missense_variant p.Ala262Gly
T/A 39740803 missense_variant p.Glu237Asp
G/T 39740812 synonymous_variant p.Ala234Ala
A/G 39740892 missense_variant p.Tyr208His
T/A 39741007 missense_variant p.Arg169Ser
C/T 39741124 missense_variant p.Asp155Asn
T/C 39741201 downstream_gene_variant
A/T 39741286 downstream_gene_variant
G/T 39741310 downstream_gene_variant
A/T 39741399 downstream_gene_variant
A/G 39741601 downstream_gene_variant
A/C 39741832 downstream_gene_variant
T/A 39742006 stop_gained p.Arg92*
G/A 39742021 missense_variant p.His87Tyr
G/T 39742183 missense_variant p.Leu33Ile
A/T 39742190 stop_gained p.Tyr30*

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_33337.1
MEEISKGKKAAIELKILLQKPSGSEPFLSYHQLLASVLTSFTQSLSIICSSSSQPSSADGLPHRNLLNPTEYSSPVTASGNDPTSGHCSEKRSQKGGRGRYNRCKGAPRKIVLSCTTDDKYAWRKYGQKGILNYEFPRSYFRCSHKHDQGCKATRQVQLEQDNPHFSTGESHLLHSDRSSNVKDDLISSPNLAIKPVFPKETYTSSDLTDHKLLDSSMWLEYWKESEPFNSTIMPSRKEFDNSADNAYSCADIQNLDMDFGGLASVLSDTHFHFDADQFF*


CDS Sequence:
>Vu_33337.1
ATGGAAGAAATTAGTAAGGGTAAAAAAGCAGCTATTGAGCTAAAGATTCTGCTTCAGAAACCCTCTGGGAGTGAACCCTTTCTCTCTTATCACCAACTCCTGGCCAGTGTCCTCACATCTTTCACACAATCTCTTTCTATTATTTGCTCTTCTTCTTCACAACCCAGTTCAGCAGATGGGCTGCCTCATCGGAATCTTCTGAATCCTACCGAATATAGCTCGCCGGTGACCGCTTCCGGCAATGATCCGACGTCTGGACATTGCAGTGAGAAGAGATCCCAAAAGGGTGGGAGAGGTCGCTACAATAGATGCAAGGGTGCACCGAGAAAGATCGTACTGTCTTGCACCACTGATGATAAGTATGCATGGAGGAAGTATGGACAAAAAGGAATCCTGAATTATGAATTTCCAAGGAGTTACTTCAGGTGCAGTCACAAGCATGATCAAGGTTGTAAAGCGACCAGACAGGTGCAACTGGAACAAGACAATCCACATTTTTCCACTGGAGAATCACATCTTCTGCATTCTGATCGTAGCTCCAATGTAAAGGATGATCTCATTAGCTCACCAAACTTAGCTATAAAACCAGTTTTTCCCAAAGAAACTTACACATCAAGTGATCTTACTGATCACAAGTTATTAGATTCTAGCATGTGGTTAGAATATTGGAAGGAATCTGAACCATTCAACTCTACCATTATGCCCTCAAGGAAGGAATTTGATAACAGTGCAGATAATGCATATTCATGTGCAGACATTCAAAATCTGGACATGGATTTTGGTGGGCTGGCATCTGTTCTTTCCGACACTCACTTTCACTTTGATGCAGATCAGTTCTTTTAG


Promoter Sequence:
>Vu_33337::LG9:39742279-39744279(-)
TTTTGCTGAATACAAAACAAAGACTTATGATAGTTTGATAACACATAACATTTACATCAGAAATCACACTTCACCTCATCATTCGTCAGTTTTCACATAATACATAACATATACAAACAACTCAACATACTAAATTTCTCAATCCAAAAACAATTTCACAATTCACTCAATAATTCCCCATACAAACATTAACTAGAACTCGTCTATCAAACAAATTAAGTAAAACTAGCTTCTCTTACCTTACACTGATGATACAAAGCTCTAAGAATACCCCGATTACTTCTCACACAATAAATTTCTAGTAACACCTATGAATCACCAATTTGAAAAAATAAAAGGTCCTTAGAACTTTAGATTTACCAAGAAGCTCAAAGAACAGAAAAAGACACACATGCAATGAAAACTTCCATACATTGACTCGATTAAAGAGCGAAGAGCACAAAGAAGCTGAAACTAGAAAAGTGATTTCTATAGAGATGATAAGTTTTAAAATAATAAAACTCGCTTATAACAAAATTATTTATAAATAAACCATTTAATATTAAAATATGAGTTTCACTGTTTTAAACTATCAAACACTCCTAAAATATCATTTTCTAATAAAAGAGGACAAGTTATATTCAGTTTAGTTTTTTATTATTAATGAGATTTTTATTTAGTTAATTTTTAGTAACATATAATGCAAGTTTTTAATAGATAATATTATGAAGGTAAAATTATTGTTAATAACATGATAAGACCTTCGAAACACTGAACGCGTAAAAGAATGAGTCTTTAGCTGGAAACTAAATTTATTTATAAGAATATAAATATTAATAGAATTATTATGTTTTTAGTTTATTTAAAATTAGAATTAGCGTCTGTTAAAAGCCTCCATATCTTGTTTTAAATATAATTTTTTAATTTAATTTCAATTTTTAGGAAGGAATTTTAATTTTATATTAAAATTTAGATGTTTAAAACATATCTAGCCTATTAATTAAATTGAGTTCAGATAATCAAATACCATGTTTCATAAATTTAAAATAATTAAAGCATAATATTATTTAAAAAGAAAATCGACCTTAGTAATTTACGTAATTTCTTATATGACTTAAATAATAAACTATAGAGATGTCGCTTTCATCCGTAGAATATAATTGAAGCTGTTTATTTCAGATAAGATTTCTGGTATCACTTTCCGGACTGAAAACTGTAAATAAAGTTGTAAAGTGCTTATAATCCCAATTAATTTTATATAACACGTACTTAAATATTCTAACTTTAAAACGAAAGTTGAAAAAATTACACTAAGAAGATTAATTATGAACACCCATAATTCTTTTAAAGACAACACCAAAATCAAAATTTGAAAAATCTCACGAATAAAATTACCAGGACTGTATTTGAATTAGATTCCTTTTTTTTCATAGAATTATGTTAATTAAGTATGAGTTATTGTAAACATTTGTTTATTTTCTATTTATACGAAAATCAATTTTCTGAGAATAATCCCTACGGATAATCAATTCAATAATTTTTATACAACTTTTCTTTTAGTCTTCTTAAATTCATATATATATATATATATATATATATATATATATATTTAAAATATATTCTCAAACATAATTACTTTTTATTTCAAAAAATATCTTAATGGGAGAGTGAATTTATGTTCTAATAAATAATTTTAAAAATAGTATATTTATATTATTTATAAGGCTTAATTGAAATTTAAGTATCTCGTTTAAAGTCCACTAAAAATATAAACTTAGTCAACTATAATTTTAAACTTATTTGTATGTATAAAAGGTTAAGAAGTATAAGCAGATTATCACGATTCTCAATTTCAGAAAGTTCATTCAGTTTTCTCCTCACTACTCTTTCCTTTTTGTTCTTCTTCCATAGCCTCTTCCAAAGAAATTCAAAGAAAAACCAAACCAGTACGCTTACTGAACATGAATAACATGGTTTGTGCTGAAACTGAGAGTGTCTCAGCAGAGAAGAAGAGAGAGATA


Gene Sequence:
>Vu_33337(-)
ATGGAAGAAATTAGTAAGGGTAAAAAAGCAGCTATTGAGCTAAAGATTCTGCTTCAGAAACCCTCTGGGAGTGAACCCTTTCTCTCTTATCACCAACTCCTGGCCAGTGTCCTCACATCTTTCACACAATCTCTTTCTATTATTTGCTCTTCTTCTTCACAACCCAGTTCAGCAGATGGGCTGCCTCATCGGAATCTTCTGAATCCTACCGAATATAGCTCGCCGGTGACCGCTTCCGGCAATGATCCGACGTCTGGACATTGCAGTGAGAAGAGATCCCAAAAGGGTGGGAGAGGTCGCTACAATAGATGGTTGACTTCACATTTTCTCTTATGTTGCTTTTCTTAATCACTGACACATGTTTTACAGTTCAAACAACATACCCTTCTTTGGTCTGAGAAATTTGTTTCCTGAGAGAGAAGGTTTGAGGATTTGGGATGTGTACGGTAGTACGGACATACACAGAGTGTCATGTTTAACGTTCATTAAAGTTTTAAGAATAGATGTTGAATTTTCCGAGGTTCTAACTTATGTATATGTTGGATTTTATGACTTTGTTATATATTTAACATGATGATTTCTGTTAGTTGATGGTCAGATCCAAGAGGGTTCATATAACTCCTTGTTATTTTTCAGAGATGCATTTTACAGATTCTAGATATGTTGCAGTATGCTATGTTCCTTTTTTTGTTTATTTTATATATGTGGAAAACATGTGTTATGTTCTTTATATTAAAATGCTTCTGGTTTGTTGTTGTTTTGCAGCAAGGGTGCACCGAGAAAGATCGTACTGTCTTGCACCACTGATGATAAGTATGCATGGAGGAAGTATGGACAAAAAGGAATCCTGAATTATGAATTTCCAAGGTATATATTTTTTTATGATCTTATTTTTATATTTTTCTATGGAAAGATTTATAATATTTCTGATATAGTATTCCAAAACATGATCCCGCAATAAAGATATACCTTCTTATTTGAGGTTTTATTTTATATATTTGCTTCTGAGTCTTCACACTTTCATCTTTATATACTTCTTTTAATTTTTCTTTGGTGTCTTTCAAGTTCAATACAAACTATTCATTTTGAATAATTTTGTATATAGGAGTTACTTCAGGTGCAGTCACAAGCATGATCAAGGTTGTAAAGCGACCAGACAGGTGCAACTGGAACAAGACAATCCACGTACGTATCGAATTACGTACATCGGTCTTCACACATGCTATGACATTCCTAAAGTTACACACAAAACCACAGATTTTTCCACTGGAGAATCACATCTTCTGCATTCTGATCGTAGCTCCAATGTAAAGGATGATCTCATTAGCTCACCAAACTTAGCTATAAAACCAGTTTTTCCCAAAGAAACTTACACATCAAGTGATCTTACTGATCACAAGTTATTAGATTCTAGCATGTGGTTAGAATATTGGAAGGAATCTGAACCATTCAACTCTACCATTATGCCCTCAAGGAAGGAATTTGATAACAGTGCAGATAATGCATATTCATGTGCAGACATTCAAAATCTGGACATGGATTTTGGTGGGCTGGCATCTGTTCTTTCCGACACTCACTTTCACTTTGATGCAGATCAGTTCTTTTAG