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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_33211 LG9 35789973 35791775 PREDICTED: CBL-interacting serine/threonine-protein kinase 11-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 35790200 5_prime_UTR_variant
C/T 35791056 synonymous_variant p.Pro259Pro
C/T 35791395 synonymous_variant p.Phe372Phe
C/T 35791538 missense_variant p.Thr420Met
T/C 35791578 synonymous_variant p.Gly433Gly
T/G 35791601 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_33211.1
MPEIEQAAAAAESTVLFEKYEVGRLLGCGAFAKVYHARNTSTGQSVAVKVVSKKKLAAMGMASNVKREIAIMSRLHHPNIVKLHEVLATKTKIYFILEFAKGGELFARIAKSRFGEDLARRFFQQLISAVGYCHARGVFHRDLKPENLLLDEHANLKVSDFGLGAVKEQMGVDGVLYTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVILFVLVAGYLPFNDPNLMVMYRKIYKGEYRCPRWFSTELRRFLARLLDTNPETRITVDEILKEAWFKKGYKEVTFGDLGLEWKSEGDDVKDLNAFDIIAFSTGLNLSGLFDSLKEVEEGERFLLKESPEKVVEKVVAAASTVEGIIVRRRKECGVELEGCDGNFAALVEVYRLSAELVVVEVRRRDGNGGVFRDVWRNKIRPYLCAASSSTTSDREETGAQPVAGES*


CDS Sequence:
>Vu_33211.1
ATGCCGGAAATTGAACAGGCGGCGGCGGCGGCGGAGAGCACCGTTTTGTTTGAAAAATACGAGGTGGGAAGGCTCCTAGGATGCGGCGCGTTCGCGAAGGTGTACCACGCGCGTAACACCAGCACGGGGCAAAGCGTGGCAGTGAAAGTGGTAAGCAAGAAGAAACTAGCCGCAATGGGGATGGCCTCCAACGTGAAGCGCGAGATTGCCATCATGAGCCGTCTTCACCACCCCAACATCGTGAAACTCCACGAAGTGTTGGCGACAAAGACAAAAATCTACTTCATCTTGGAATTCGCGAAAGGAGGCGAGCTCTTCGCGAGAATCGCGAAGAGTCGATTCGGCGAAGATCTCGCGCGACGGTTTTTCCAGCAGTTGATCTCTGCCGTCGGGTACTGCCATGCGCGGGGCGTTTTCCACCGCGACTTGAAGCCGGAGAATCTTCTGCTGGACGAGCATGCGAACCTCAAAGTCTCCGACTTTGGACTCGGCGCGGTGAAGGAGCAGATGGGGGTGGATGGGGTGCTGTACACGCTATGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGGCGAAGAAGGGTTACGACGGGGCTAAAGTTGATGTTTGGTCTTGTGGGGTTATTCTCTTTGTTCTTGTGGCTGGGTATCTACCGTTTAATGACCCGAATCTTATGGTGATGTACAGGAAGATTTACAAGGGGGAGTATCGATGTCCGAGGTGGTTTTCGACGGAGTTAAGGAGGTTTCTGGCGAGGTTGTTGGATACGAATCCCGAGACGAGGATAACCGTCGATGAGATTTTGAAGGAGGCGTGGTTCAAAAAGGGGTACAAGGAGGTTACATTTGGCGATTTAGGTTTGGAGTGGAAGAGTGAAGGTGATGATGTGAAGGATTTGAACGCGTTTGATATCATTGCTTTCTCCACAGGCTTGAATCTCTCCGGTTTGTTTGATTCATTGAAGGAGGTGGAAGAGGGAGAGAGGTTTCTGCTTAAGGAGTCGCCGGAGAAGGTGGTGGAGAAGGTAGTTGCGGCGGCGTCTACTGTGGAGGGTATTATCGTGCGGAGGAGGAAGGAGTGTGGGGTGGAGTTGGAGGGGTGTGATGGTAATTTCGCCGCTTTGGTGGAGGTTTACCGGTTATCGGCGGAACTGGTTGTGGTTGAGGTGAGAAGGAGGGATGGCAATGGCGGAGTTTTCAGGGATGTGTGGAGGAATAAGATTAGGCCGTATCTCTGTGCTGCAAGTAGCAGTACGACGTCGGATCGGGAGGAAACCGGTGCGCAGCCGGTTGCCGGTGAATCATGA


Promoter Sequence:
>Vu_33211::LG9:35787973-35789973(+)
GCGTTAAATAGTGTTGGGCCATAATTGGGCCAACACTTAAGGTACTATTGGACAGTAGTCCAGCAGAAGATAAAATAATCAAAGAAGAATAAAATAATCAAGAATATCTTATTAAATCTGAAGATGTTGATAAGTGGTTAAGATAAAGTCGTTTATGAGTAACTAACCGGATCTCTAGGTAAGGTTGTTTTTTGAAACACTTATAAATACACTAACAGGGTCAAAAGCCAGGTATGTTCAACTGAGACTCCACTACGGTCTACTTACGTCTGATCAGGACTTAAATATTAAATTGTGATAAACAGTTCATAAAACCGCTCCTAACTTGAGCATCGAAGTGTCTTTTGCAAGTACCTCCCCCCATCTAGAGTACAACCGAACGACATCCAGAGTATAATCGAGCGACATCCAGAATCCAATTGAACGACATCCAGAATTCAAGCGAGCGGAACACTCGATCCAGACGTTCGAAAACAAGGAAGACACGTGAGAAAAGATTAGTCTCTCAATCTTACAAAACTCTACCGAAACATATAGTAAGTGGAGATTTTCCATGTTGTGACAGATAAAGAAATGTCATGTTAGGATATAACATTTGATTCCTTCTCAAACTAAATTTTGAGTGTAGACAATATATGTTGATGGAATTAGATTTTGTAGACAATATTAATTAAATTGATAAATATTTTGGTCTTGATAATATATTTATAAAAGAAATCTTGTAGTTAGTCGTTGTTTTCTAGGTCGTGAAAGGAGAAGAAAAAGAATAGTCTACAACTCACTTTAATAATAATATGTATTATAATTTCAAATGAAAAAATAAAATAAATGAGATATCTTAAGTTTTCAAATAACCTTTTTTTTTGCGTGTGTCAAAATATCCCTTTGAGAGAAACCATGAACACGCATTTCATTTGATTCCATTGCACATCGTAATGTATTTTGAAAGTATCTCGCCTTTTTAAAGTATATTCTCAGTTTTTGAGAATCATTCTTACGTCCTACAATTTTATTTTATTTTATTTTTTAAAACCACATAATGCTTTTCTTTTCTGAGAGACTGAACATTATTATTTATACAAAATTTAAAAATATACTCGTTTCAAGGAAAGAGTCCAAAAACACTGGTAAACTCTTTTTTTAATCTTTGCAAGAAATCTCAACATATTAAAGGTCAATCTCAAAGCGCCCCCAACTGTACAAGAGAAAAAATCAACTATTTTGGTAAAACCGGCACCGACGTGGCATTATCCTATTGCTAAAGTCAATCTCATGTCCCATCGCCACCGCCCACGTGTATGGCAATAGTTAACACCTACGACTGCTGAAAAGAAAAGGGGAATCACGTTCCCATTCAAGCAATGGATCCACCTAGCGGTCTCCCAACTCCAACCACACACGCGCCCTTCACGCGTGTCATTAAAACCACCTGCTTTACATTTTTATTAAGATAACTAATTAAATTTATTATTTTATAAACTACTTTTAATATTTATGCAATTATTTATTTTTATTCTCCTATTTCAATTTTTTATTCATTTAATGTTCAGAGAGAACATAGTTTTAATATAATTTATCACTACTCATTTTTTCCAATTTTAATGAGACATTACCTCATTAATTTTAATATTTATTTTTTAATTAAAATTTCTTGAATAATTAGTAGTTTCTTGTAGAGATATATAACTGATGTATCAGATAATTAATAAAATATCTTATTCAAAGAGATAAAAAAATATTGGAAAAAGATTTAAAGGTGGGGCATATTTTTCCTCCAATATCTATAGTTCATTTTCTTTTTTTTATATTTAAATTTTTGAAATGTTTCAGTTTTTATTTTCTAACGTTATTTTACATTATCGCTTATTATTTATATAATCTAAATTACTTTGAAAAAGATAGAACAGGTATATGGAAGTTACAAAAGTACAAAAATTACAACAAATTATTTTTTGTTTCTCTGAACACATTAAATAATGAGAAATACATAGGCTACTGAG


Gene Sequence:
>Vu_33211(+)
GACCCCATTCAGTAAGTAGAGACATTAATAACCACCAAACCAACTAATAAACGTAATCTTCCAACGAAGTTCCAAAGCAGTTTCTTCGTGAAACATCTCAAACAGCCAGTGCCAGCAAAACCTCGTTTCCTTATAACTTAATCGATCCCTTCCAATTACGCTTCCACCAACCACAACAGCAGAAAAGGAAATCAATCCCGAAAGCTTTCATCAACAATTTTCGGGAAATTTCCAGATCCCCTTTCAACCTCTCTACAACAATCCCCCAATTAAGATCGTGCTGAGCACGATAGTCTTAGTGAAACCAATGCCGGAAATTGAACAGGCGGCGGCGGCGGCGGAGAGCACCGTTTTGTTTGAAAAATACGAGGTGGGAAGGCTCCTAGGATGCGGCGCGTTCGCGAAGGTGTACCACGCGCGTAACACCAGCACGGGGCAAAGCGTGGCAGTGAAAGTGGTAAGCAAGAAGAAACTAGCCGCAATGGGGATGGCCTCCAACGTGAAGCGCGAGATTGCCATCATGAGCCGTCTTCACCACCCCAACATCGTGAAACTCCACGAAGTGTTGGCGACAAAGACAAAAATCTACTTCATCTTGGAATTCGCGAAAGGAGGCGAGCTCTTCGCGAGAATCGCGAAGAGTCGATTCGGCGAAGATCTCGCGCGACGGTTTTTCCAGCAGTTGATCTCTGCCGTCGGGTACTGCCATGCGCGGGGCGTTTTCCACCGCGACTTGAAGCCGGAGAATCTTCTGCTGGACGAGCATGCGAACCTCAAAGTCTCCGACTTTGGACTCGGCGCGGTGAAGGAGCAGATGGGGGTGGATGGGGTGCTGTACACGCTATGTGGGACCCCTGCTTACGTGGCACCGGAGATTTTGGCGAAGAAGGGTTACGACGGGGCTAAAGTTGATGTTTGGTCTTGTGGGGTTATTCTCTTTGTTCTTGTGGCTGGGTATCTACCGTTTAATGACCCGAATCTTATGGTGATGTACAGGAAGATTTACAAGGGGGAGTATCGATGTCCGAGGTGGTTTTCGACGGAGTTAAGGAGGTTTCTGGCGAGGTTGTTGGATACGAATCCCGAGACGAGGATAACCGTCGATGAGATTTTGAAGGAGGCGTGGTTCAAAAAGGGGTACAAGGAGGTTACATTTGGCGATTTAGGTTTGGAGTGGAAGAGTGAAGGTGATGATGTGAAGGATTTGAACGCGTTTGATATCATTGCTTTCTCCACAGGCTTGAATCTCTCCGGTTTGTTTGATTCATTGAAGGAGGTGGAAGAGGGAGAGAGGTTTCTGCTTAAGGAGTCGCCGGAGAAGGTGGTGGAGAAGGTAGTTGCGGCGGCGTCTACTGTGGAGGGTATTATCGTGCGGAGGAGGAAGGAGTGTGGGGTGGAGTTGGAGGGGTGTGATGGTAATTTCGCCGCTTTGGTGGAGGTTTACCGGTTATCGGCGGAACTGGTTGTGGTTGAGGTGAGAAGGAGGGATGGCAATGGCGGAGTTTTCAGGGATGTGTGGAGGAATAAGATTAGGCCGTATCTCTGTGCTGCAAGTAGCAGTACGACGTCGGATCGGGAGGAAACCGGTGCGCAGCCGGTTGCCGGTGAATCATGATTCCGCGTCATTATTATTTTTCAATTAGTAAATTTAAAATAAAATTTTAAAAGAGAATTGGAAGTGGAGAATTGAAAATTGAAACGTAGTAGGGCACAAATAGATGTGGAACACAGTTAATTAAGCGTGCAAGTTCGCTATGTATATTTTTATCATGCTTATATGTAAAGTATTACAGTATTTTGCTT

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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