Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_33053 LG9 31835184 31838845 hypothetical protein
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 31835423 synonymous_variant p.Arg80Arg
T/C 31835800 missense_variant p.Val206Ala
G/A 31835807 synonymous_variant p.Arg208Arg
A/C 31835842 splice_region_variant&intron_variant
T/G 31835846 splice_region_variant&intron_variant
A/T 31836102 missense_variant p.Lys269Asn
G/T 31836415 stop_gained p.Glu330*
G/C 31836442 intron_variant
C/T 31836532 synonymous_variant p.Ser342Ser
A/T 31836629 intron_variant
G/A 31836631 intron_variant
G/C 31836639 intron_variant
A/T 31836662 intron_variant
G/T 31836721 synonymous_variant p.Val376Val
T/C 31836930 intron_variant
T/C 31836965 missense_variant p.Phe400Leu
T/C 31836974 missense_variant p.Cys403Arg
A/G 31837198 intron_variant
G/A 31837271 intron_variant
T/C 31837289 intron_variant
C/T 31837329 intron_variant
C/T 31837330 intron_variant
T/G 31837398 upstream_gene_variant
G/A 31837444 missense_variant p.Asp448Asn
G/T 31837574 upstream_gene_variant
A/T 31837584 upstream_gene_variant
G/A 31837678 upstream_gene_variant
G/A 31837710 stop_retained_variant p.Ter485Ter
T/C 31837715 stop_lost p.Ter487Glnext*?
C/T 31837721 stop_gained p.Gln489*
C/T 31837834 splice_region_variant&intron_variant
A/T 31837853 upstream_gene_variant
G/T 31837871 upstream_gene_variant
A/G 31837893 upstream_gene_variant
G/T 31837896 upstream_gene_variant
A/G,T 31837920 upstream_gene_variant
T/A 31837921 upstream_gene_variant
A/T 31837955 upstream_gene_variant
A/C 31837964 upstream_gene_variant
A/C 31837965 upstream_gene_variant
A/G 31838097 missense_variant p.Asn548Ser
C/T 31838119 synonymous_variant p.Tyr555Tyr
T/A 31838154 upstream_gene_variant
G/A 31838155 upstream_gene_variant
A/G 31838266 upstream_gene_variant
T/A 31838271 upstream_gene_variant
A/C 31838321 upstream_gene_variant
A/C 31838338 upstream_gene_variant
A/C 31838398 upstream_gene_variant
A/T 31838450 upstream_gene_variant
A/T 31838458 upstream_gene_variant
A/C 31838498 upstream_gene_variant
T/G 31838594 upstream_gene_variant
C/G 31838632 upstream_gene_variant
G/T 31838633 upstream_gene_variant
C/T 31838640 upstream_gene_variant
C/G 31838641 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_33053.1
MASLLSLLSLLIPLLATSCVSVAVFSFQASLKTTYIEPFRCSSMISTCNASLYHISYNHNADDLANFYSVHPSQIKPIMRGTKQDYLITVPCSCNSSNDLGGYFYDTTYKVKPNDSSVEINNIAYSGQAWSINREVNPNEELAINLPCGCSEKNDSQIVVTYTVQRSDTPISIATLLNATLANMVSMNEVLVQNPSFIDISWVLYVPRELNGLPSNGKEKKHYIIIGILAGVTFFSIVTLIILVVVLRRSRASVAAKNDPNIVSKRSIGNRTISIKDFHAEHIEDATPFESERPVIYALEEIEDATNNFDETRKIGVGGYGSVYFGMLEEKEVAVKKMRSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLHDPLLKGHQPLSWCARVQIALDAAKGLEYIHDYTKARYVHRDIKTCNILLDEKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVLSELITGKRALFRDNQQANNMKSLVTVVSQIFRNKYPENALADAVDGNLQHNYPMEDVYKMAEVAHWCLWEDPNDRPVMREIVVALSEIVMSSTEWEASLGGDSQVFSGVLDGR*


CDS Sequence:
>Vu_33053.1
ATGGCTTCTCTTCTTTCTCTTCTTTCTCTTCTCATTCCTCTTCTTGCAACTTCTTGTGTAAGTGTAGCTGTGTTTTCCTTCCAAGCTTCTCTCAAAACAACTTACATTGAACCGTTCAGATGCTCCTCCATGATCAGCACATGCAATGCCTCACTCTACCACATAAGTTACAATCACAACGCAGATGACTTAGCCAACTTTTACTCCGTTCACCCCTCCCAAATCAAACCTATAATGCGTGGCACAAAGCAAGATTACCTTATAACAGTGCCTTGTTCCTGCAATAGCTCCAATGACCTTGGCGGATATTTCTATGATACAACCTACAAGGTGAAGCCTAATGACTCTTCTGTGGAGATTAACAACATTGCCTACAGTGGCCAAGCCTGGTCTATTAACAGAGAAGTGAACCCAAACGAGGAATTAGCAATAAATCTTCCTTGTGGGTGTTCAGAAAAAAATGACTCTCAAATTGTTGTCACGTATACAGTTCAGCGGAGTGATACACCCATATCAATCGCTACTCTGCTAAATGCTACCTTAGCAAACATGGTGAGTATGAACGAAGTTCTGGTTCAGAACCCCTCATTCATAGATATTAGTTGGGTGCTGTATGTTCCAAGGGAACTCAATGGTTTGCCTTCCAATGGAAAAGAAAAGAAACACTATATAATCATTGGCATCTTGGCGGGTGTGACATTCTTTTCAATTGTTACTTTGATAATTCTCGTTGTCGTTCTTAGGAGATCCAGGGCCAGTGTAGCCGCAAAAAATGATCCAAATATTGTGTCTAAAAGATCAATTGGAAATAGAACTATTTCCATAAAGGACTTTCATGCAGAACATATAGAAGATGCAACTCCATTTGAATCAGAAAGACCAGTAATTTATGCTCTAGAGGAGATTGAAGATGCTACAAATAACTTTGATGAAACGCGAAAGATTGGAGTAGGTGGATACGGGAGTGTGTATTTCGGAATGTTAGAGGAGAAGGAGGTTGCAGTAAAGAAGATGAGGTCTAATAAATCCAAAGAATTCTATGCAGAACTCAAGGCCTTGTGTAAGATCCATCACATTAACATTGTGGAGTTGTTGGGATATGCCAGCGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCAAATGGATCTCTCAGTGAGCATCTTCATGATCCATTACTGAAAGGTCACCAGCCTCTTTCTTGGTGTGCTAGGGTTCAAATTGCATTGGATGCAGCAAAAGGTCTGGAATACATACATGATTACACGAAAGCTCGATATGTGCACCGTGATATAAAGACTTGCAATATTCTCCTTGATGAGAAGCTAAGAGCAAAGGTAGCAGATTTTGGACTTGCAAAGCTAGTAGAACGAACCAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACACCGGGCTACCTTCCACCAGAATCTGTTAAGGAGCTTCAAGTGACTATAAAAACAGATGTTTTTGCATTTGGGGTGGTTCTGTCAGAGTTGATAACAGGGAAACGTGCACTATTTCGTGACAACCAACAAGCCAACAATATGAAATCACTTGTTACAGTTGTTAGCCAAATTTTCAGAAATAAATACCCAGAGAATGCTTTAGCAGATGCCGTAGATGGGAATCTTCAGCATAACTATCCCATGGAAGATGTCTACAAGATGGCAGAAGTAGCTCATTGGTGTTTGTGGGAAGATCCAAACGACAGGCCTGTGATGAGGGAGATAGTTGTGGCATTGTCAGAGATTGTTATGTCATCCACAGAATGGGAAGCATCACTAGGTGGAGACAGCCAAGTCTTCAGCGGGGTTCTTGATGGAAGATGA


Promoter Sequence:
>Vu_33053::LG9:31833184-31835184(+)
AAATAATAAAAAATTAAAAAAGAAAAAAAAGTAAAAATGTGTGGGATACACGACTTTAATAGGAGAATTCGTCAATCCCTACAACTTTAATATTTTTATTATTTTGTAATGAAAAAAACGTAATAATTGATTACCATGCTTAATAATCGATTATCATGCCCTAAATTTTTTTTTAACACGACTTCACCTATGATTACTGTGTCAGGATGAAGTCGTGCAAGGGTACGACTTCTTCATTTAAAGTCTGAACCCCACGACTTGCATATTTGCGTAATTGGAAAATTTTTTGCCTACATTCGTAATTGTAACATCCCAAAAATATAGTATAACTATATTATAGAGTCATCACATAACATGATAAAATAGCATAGTCATCTACTAATTAATAAAGTATTAACAATACAATTATCCAAAAATAACCATAGAATTAAAACTTTACAGAATACTGCCTAAAGAACAAAACTATAGACACAACCGATCGGTCCCTACAAAACTTCACATGATCTATCAGTACTAAACTAAGCAGTCGGGTCATCTCCATCTAGCGCCTGCTCCACCGAACACTCACCATCCTCTGCTCACATCCACCAGATGATCATTTCAAAGGAGAAATGTCGAACGACAACATGACAAGGCAGAAAGTATGGTAAGCCAGTGTAATTTAATAATCATGTAAACATACAATCCAAACATACCGAACAGATAAAATAATTAAACACGAAGAAAAACATATAACACATATTGACCGACCACTTTAACCGACCGTCTGGACTAGTATGAATATGTAGCTTTGGCCGTTCGTACATTCATGGGTGTAGTAATTGGAAAACCATCAGCTGCCACACGAGGTTAACCCGTTATCACTCACCGTAGGACCCCCCTCGGCTAGGGCCTCTTGTTATTCTTACGACATGACTTACCCATCTCTACTTAAGACTTGGTATTGTATACAAATTTTATAAATATTAAATTTTATATAAACATTTTATTATGTTTAACCGTTATTGTGAATCTCGATCTGGATCATCTAACATGATTAGCACTTGCTGGAAAGATTGAAACACATTCATTTGATGGAGTTTTATAGTTCAAAATTTCTGTTTATGAATTATGTTGTTATCAATAGATTTATTCTATATATTAGTTATTTTACCATGAGAATATTAGTTATTAAAACCTTTCACTTTAACTCACCCAAAGGTGAATTTTGTTCACCTATTTCTAGAGACTTACTACGCTTAGAGGCTAATTACTTGGATAATGAGAATAAAAATAATAATAAGATGGTCTTCGTAATGTATAAAAATCATTATATTGATCAATCCAATTTAGATTTGTGATTTAATAATACATATGCATAAAACGTAAATTTGAAAATACGTGAATTTATTTCTATAATTAAGAGATTTGTCCGCATAGAGGATAATGGTAAACTTAAATATCTATTTACATATAGAACTAGAAAATAAGGTTGGGGAGTTAATTCCGAAGATGACATAAACGCTTATGACGAGAATTAGATTTTTGTTACACTTGTTTCTTTAAAATCCAAGTTAGTATGCTTCAACTGAAAACGACTGCCTAACGTGAGGATAAAACGAAAACCCAGATAAAATAATATAAATTTTGCCAGTCGTCGACATTCAAGTGGGATTAAACTACAGCTAGAGTGTGACTTGTGATGGCACCATGGCTTTTTTATTCGATGTGGAACTTGTCTATGGCTTTTGTTTTCTGTTCGAGTCCACCATTGCCGTCGGAGATCCAACAAATATGCTTCATCCATACGATTGGAACCAAATAGTTCTATAATAATCATCACCATCATCACATTTTGTAAAATCATGCTAAGTGGAGAACGTTTCTAGTTCTTGAAATCAAGAAGCAACAACCACATGATGACAAGTGCAATGCAACGGATGCACTTGGAAATTAACCAGTTTGTTATTGCTTTCCTATCTCTCTTCCCTTTCAAACAGGTTTCATGATCACACAAACCA


Gene Sequence:
>Vu_33053(+)
ATGGCTTCTCTTCTTTCTCTTCTTTCTCTTCTCATTCCTCTTCTTGCAACTTCTTGTGTAAGTGTAGCTGTGTTTTCCTTCCAAGCTTCTCTCAAAACAACTTACATTGAACCGTTCAGATGCTCCTCCATGATCAGCACATGCAATGCCTCACTCTACCACATAAGTTACAATCACAACGCAGATGACTTAGCCAACTTTTACTCCGTTCACCCCTCCCAAATCAAACCTATAATGCGTGGCACAAAGCAAGATTACCTTATAACAGTGCCTTGTTCCTGCAATAGCTCCAATGACCTTGGCGGATATTTCTATGATACAACCTACAAGGTGAAGCCTAATGACTCTTCTGTGGAGATTAACAACATTGCCTACAGTGGCCAAGCCTGGTCTATTAACAGAGAAGTGAACCCAAACGAGGAATTAGCAATAAATCTTCCTTGTGGGTGTTCAGAAAAAAATGACTCTCAAATTGTTGTCACGTATACAGTTCAGCGGAGTGATACACCCATATCAATCGCTACTCTGCTAAATGCTACCTTAGCAAACATGGTGAGTATGAACGAAGTTCTGGTTCAGAACCCCTCATTCATAGATATTAGTTGGGTGCTGTATGTTCCAAGGGAACTCAATGGTTTGCCTTCCAATGGAAAAGGTGATGATTTCTCTTCCTCAATCCCTTCTATATTTCAGCATTCATGATTTTTCCATATTTTTATTGGCTCGCGGTGCAAAAATCTTAGCATGGCTTTCCCTTGTTTGCAGAAAAGAAACACTATATAATCATTGGCATCTTGGCGGGTGTGACATTCTTTTCAATTGTTACTTTGATAATTCTCGTTGTCGTTCTTAGGAGATCCAGGGCCAGTGTAGCCGCAAAAAATGATCCAAATATTGTGTCTAAAAGATCAATTGGAAATAGAACTATTTCCATAAAGGACTTTCATGCAGAACATATAGAAGGTAACTTGAAAATAAATTTTTGGAAGCAAAAGCAACTGATTTTCGAAAATACGAAGTTTTCAGTAATTTGCTAATATCTCTACAAGGAGACTAAGAAGGTCTTTTGTTTATTCATGATAAATATGGCCGAAGATGCAACTCCATTTGAATCAGAAAGACCAGTAATTTATGCTCTAGAGGAGATTGAAGATGCTACAAATAACTTTGATGAAACGCGAAAGATTGGAGTAGGTGGATACGGGAGTGTGTATTTCGGAATGTTAGAGGAGAAGGTATGAAAACCCAAGACATTGAAGCATATTTTCATTTGCTGATTGAGAATTGGAGAATGATAGCTGTTTTAACCTCAGGAGGTTGCAGTAAAGAAGATGAGGTCTAATAAATCCAAAGAATTCTATGCAGAACTCAAGGCCTTGTGTAAGATCCATCACATTAACATTGTAAGTAATGTCTCTGATGAAGAGAGCTTTGGCATTATCTTTAAGATATGTTGTTTGATTATACTATAGATATAAACACTATTTCAGGTGGAGTTGTTGGGATATGCCAGCGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCAAATGGATCTCTCAGTGAGCATCTTCATGATCCATTACTGAAAGGTATATCGATGCCAAAATCATTTTCCAAACAAAAGTAAGCCTATGAGACATTTTAGGACTCAAACAAACACAAAATATAACTCTTCTCAAAAGATGAATCCAATAAGTGAGTATTATTACTTAAAGATCAAATTAAGTAATATAACCTAATTTTACCATTGTATTGGTACAGGTCACCAGCCTCTTTCTTGGTGTGCTAGGGTTCAAATTGCATTGGATGCAGCAAAAGGTCTGGAATACATACATGATTACACGAAAGCTCGATATGTGCACCGTGATATAAAGACTTGCAATATTCTCCTTGATGAGAAGCTAAGAGCAAAGGTAAATCTTGCTTTGTTTTGCTCCCTTCTGCTCTGTCCAAATTGCCACCACTAAAAGAAAATTGGGACTAATTCTATTTTTTTTTTTAATATACAAAGTAAACTGAATCAGCTATTCATGTTATCATATAATAAACATGTTATAACACTGTAGATTAACAAAACAACGAAGGTTTTAAAACATTGTACTTGTCCCTTTTAATTTAACTTGTCTTGTAAGAAATTGCCGGGGATGAATTTATTTTATTTCTTTGTAAAGCTGAGTTGGAAAACTTTGAACCAAAGTCTCTATACTTAGTTCAAAATCAATCGTTAAGTTGGCCTTTTGTACGTAGGTAGCAGATTTTGGACTTGCAAAGCTAGTAGAACGAACCAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACACCGGGCTACCTTCCACCAGAGTAGGTTTTGTGCTTTCAGATCATAAGTACACTCTTCTGGTGTATTCAACAGAATCAATTTTCTTGCTACCATTATACACTTAAACCCATGTCAAAAAAAGTTACACACCAGTTGATTTTATTCTGACTTGATAGCTTTTTTGCTCCTTTTAGATCTGTTAAGGAGCTTCAAGTGACTATAAAAACAGATGTTTTTGCATTTGGGGTGGTTCTGTCAGAGTTGATAACAGGGAAACGTGCACTATTTCGTGACAACCAACAAGCCAACAATATGAAATCACTTGTTACAGTTGTAAGTCAAACTCGTTTTTCATAGAACATTAAAAAGAGAAATAGAATTTAAGGTTGAGAGTATGTACTGTGAAAATGAAATCCAAAAAATCAATAGTTCACTTTTATTCAGAGAAATCTAACTCTGCAGTTGACTCAATACTCAAACATTTATTATTATTATTATTATTTGAAAGGCTTCTTTTCATCATATTCAGGTTAGCCAAATTTTCAGAAATAAATACCCAGAGAATGCTTTAGCAGATGCCGTAGATGGGAATCTTCAGCATAACTATCCCATGGAAGATGTCTACAAGGTTAGATTTACCTGAAGTTCCTATCTCTCTGTGGACTCAATGGAAATATAAATAAAAAAAAATAGTTTTGACAGATATTTGTTTTTAAGAGACAGTAAATTAGTAATTGAGGATATCAGTTTCACTCCGGAGGACCTGTAACCAAAACTTTTCCCTTTAAGAAGTCAAGAGCACCAATGAAAAGTTTATGCTTCAAAGATAATAGGGATTTTATTAGTAAGCTTATCATAAATTAGGATGCATTTTCTTTGACTAAAACTTCATAGACGACTAGAAAAGGGGTGAAAACAAACAAACGAATGAGTTTCTTAATCACCTAAAACAAACAATCTTTTAAAGGCAAAAGCATTAGATGGGTTTTGTGTTTGAACAAAGATAATAATGATCACTCCTTTAACATAGTTATTGTGTGTCTTTAGAGATAATGTAGGGGATAGAATAATGCTGTTGCTTTCCTTAGTCTAATATTATTCTGACATAAAATAGTTATATCACTTTTTCACAAGACTCGTTTTTCCCTTTTCATAATTTTGTTATTTGGAACATTTGGCTTTGCAGATGGCAGAAGTAGCTCATTGGTGTTTGTGGGAAGATCCAAACGACAGGCCTGTGATGAGGGAGATAGTTGTGGCATTGTCAGAGATTGTTATGTCATCCACAGAATGGGAAGCATCACTAGGTGGAGACAGCCAAGTCTTCAGCGGGGTTCTTGATGGAAGATGA