Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_33022	LG9	31405145	31405894	PREDICTED: zinc-finger homeodomain protein 1-like	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
C/G	31405496	synonymous_variant	p.Ala133Ala
G/T	31405550	synonymous_variant	p.Pro115Pro

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_33022.1

MEFEDQEDQEEEQCMGAAAYDPARMKVPLGPEAVMAAQPVRSSTNGGAGRARYRECLKNHAVGIGGHALDGCGEFMAAGTEGSIDALKCAACSCHRNFHRKESDGAGASVGGGDPYLVSHHPLHHPPPPQFAAYYRTPTGYLQVGGQARVAGTLALPSTSGGGGTQSTREDQEDVSNPSAGGTGSKKRFRTKFTQEQKDKMLELAEKLGWRIQKHDEGVVQAFCNETGVKRHVLKVWMHNNKHTLGKKP*

CDS Sequence:
>Vu_33022.1

ATGGAATTTGAGGATCAGGAGGACCAAGAGGAGGAGCAGTGTATGGGTGCCGCAGCTTACGACCCCGCCCGGATGAAGGTTCCGCTCGGTCCGGAGGCAGTCATGGCTGCGCAGCCTGTGAGAAGCAGCACCAACGGCGGCGCAGGGAGGGCACGCTACAGAGAGTGTCTGAAGAACCACGCCGTCGGCATCGGCGGCCACGCGCTCGACGGCTGCGGTGAGTTCATGGCAGCGGGGACGGAGGGTTCCATCGACGCGCTTAAATGTGCAGCCTGCAGCTGCCACCGCAACTTTCACCGCAAGGAGAGCGATGGGGCCGGCGCCTCCGTCGGCGGTGGGGACCCCTACTTGGTTTCGCACCACCCGTTGCACCACCCTCCGCCGCCCCAGTTCGCGGCGTACTACCGGACCCCGACTGGATACCTTCAGGTGGGGGGGCAGGCGCGCGTGGCTGGGACGCTGGCGCTGCCGTCGACGTCCGGCGGCGGTGGGACGCAGAGCACTCGGGAGGACCAGGAGGACGTTTCGAACCCGAGTGCAGGTGGAACGGGGTCCAAGAAACGGTTCAGAACAAAGTTCACGCAGGAGCAAAAGGACAAAATGCTTGAACTTGCTGAAAAACTAGGGTGGAGGATTCAGAAACACGACGAGGGTGTGGTCCAAGCCTTCTGCAACGAAACCGGGGTGAAGCGTCACGTTCTCAAGGTTTGGATGCATAACAACAAGCACACTCTCGGTAAGAAGCCCTAG

Promoter Sequence:
>Vu_33022::LG9:31405894-31407894(-)

ATTAAATTATAATTAAATTTAACCTAATAAAATATAAATTAATTTTAATATTAATTAAATATAAGTTAATAAAATATAAATTAAATTTTTATTTCAATTTTTTGTCTTGGATATCCACATCCGACCATTTAAAAGTGAATAAAAATACTCACTATCCACCATCTGTGAATAATAAATATATACAAAATATCAACTATCCGCCACAAATTTTTTTTTATAAATACTTTTTTCCATTCCTAGTAAGTAGTATATAAGTGACTTTAAATTTCACTTGACAAAAAAATTGATGTTGTGAGTTTCGGTTATTCTCAAAGTTCAATCATTAAATTGGTAATTAAGTCATCCATTGGATACCGATTAATGTTTACTTTGATACTTGATATGTATTTTCAGCATGAGGGTGGTGTTTTGTTATCTTCCTATTCTCATGATGTAAAAAGGAAAAGAAGGAAATGAAATGTGAAAAGTGACAAAACTTATGTTGTTTGGAAACAATGAAACAAACGAAAGATATAACAAAATTGTGGATCACGTGCCATTCAATTCACACTGTCTTATGCAAAGTGAAGAAAAACATAATAATTTATTAATTTGTTCACCTTATACCAAAGTAAACCTCCTCCTTCAACTTGTTAGTATCATCCTCAACTCATGAAATGAAAAATGAGAAAAAAATGGATGGATATGTGGAAAAGTGACTATGCTTGTGTAGTTTAGAAACAAGGAATTAAAGAGAAAAGTTATAGAAAAAGATTGGATCCCACCCAACTGATTGGGAAAAAAAGAGATGGAAAAGTTATTGAAGCCTATGTTGTTGAATAGTAGTGATACAAAAGAAAAAAATAGTGGAGCCAGCATAGTTGAATTTTCACTGTAATATGTAAAGGAATATGTAGAAATGTTTTAATTATTAACCTTGTAACATAATACACCCACTCTTTGAGATTTGTTGTCTTCCACTTTTTATGGCGAATAAACGAAAAGAGGAAATGAAAATGTGAAAAGACTGAAGCTTAATGTTATTTAGTACGCATGAAGAAAAAGAAGAAAGATATAAAAAATAGTGGATTCTATGTAATTGAAAATCGACTTCGTAAGCGAAGAAACACATAGAAATGTTATATATGCTAGTAACCTTATACAGAAACAAACCCATTCCTTGAATTAATCTTGTCTACTTCCTCTTCTTAAGACCAAAAATAAAAAAGAAAGATTTTAACATTATTGAAGTTTATGCCACATTTGGCAGTTAAACCGACTATCTTACAACCAATTTAAGAGAATTCTAAAAATTTATAATTATAGAAAAAGTAGTTTAATGAATGGATATATAAAGTGTATTTATCATGGTATGAACTGGTTGGATCTAAAAAGATTAAGACACATTGGATCTAAAAAAATTGAATGTATATACCTTTTATATCTGGCTTACGACCACGTTGTTATCCATATTAGGAAAAGGAAAGAAAAAATATACGTAGAGTGGATAGAAAAAGATGGAAACAGAAAAACAAAAGTCGAATACAAAGTTGATATATGGTTCGAGTGTGGTTGTTGTGTATGGTAAAGATTTGCATTAAAAACAGATATATTGTTGAAGTAAAATTTATCCGTTTTGTCATTTGTCCTGGGCTCATGGTGCCCAGGAGTACTGTCACCCCAAGTTAAAACTTTTCGCAGTTAATCTTGCGCACACATTCATGTGCAAGCGGTGAAAAACAAATTACGGAGTGACCGGAACAGCCGGTGGAAGGTGAAGATCTTGAGACAAATGGAGAGAGAGAGTTTTGTATATTATGCTCTAATTGTCGTGTCCTCCGAAAACAGAGAACCGCAAAAGTATATGAAGGAATACACCTTTGGACAAAGAAAGCACGACGAGAGCAGAGAACAAAGAGAGAGAAACACTGCGAGAAGAGTACTGAGACCCCCTTTTAAATTTTCCCATCACTTGTCATTAATAGTACTCACAAGTTTAAGATTTTCGCCAATTTTTCCAA

Gene Sequence:

>Vu_33022(-)