Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_32774 LG9 26128413 26130308 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 26128417 missense_variant p.Ser2Leu
T/C,G 26128423 missense_variant p.Leu4Pro
C/T 26128430 synonymous_variant p.Thr6Thr
A/G 26128431 missense_variant p.Thr7Ala
C/T 26128432 missense_variant p.Thr7Ile
T/C,* 26128443 missense_variant p.Phe11Leu
T/C,* 26128461 missense_variant p.Phe17Leu
C/T 26128486 missense_variant p.Thr25Ile
C/T 26128492 missense_variant p.Pro27Leu
C/T 26128512 missense_variant p.Pro34Ser
C/G 26128515 missense_variant p.Leu35Val
C/T 26128520 synonymous_variant p.Asp36Asp
T/G 26128530 missense_variant p.Phe40Val
T/C 26128539 missense_variant p.Cys43Arg
C/T 26128555 missense_variant p.Pro48Leu
C/A 26128632 intron_variant
A/G 26128668 intron_variant
G/C 26128717 synonymous_variant p.Val52Val
T/C 26128721 missense_variant p.Cys54Arg
T/C 26128734 missense_variant p.Leu58Pro
C/T 26128736 missense_variant p.Pro59Ser
C/T 26128740 missense_variant p.Thr60Ile
G/A 26128745 missense_variant p.Val62Met
A/G 26128752 missense_variant p.His64Arg
C/T 26128753 synonymous_variant p.His64His
C/A 26128760 missense_variant p.His67Asn
T/C 26128763 missense_variant p.Phe68Leu
C/A 26128769 missense_variant p.Leu70Ile
T/G 26128770 missense_variant p.Leu70Arg
C/A 26128772 missense_variant p.Leu71Ile
A/C 26128780 splice_region_variant&intron_variant
T/C 26128793 intron_variant
C/T 26128798 intron_variant
T/C 26128814 intron_variant
G/A 26128815 intron_variant
A/G 26128818 intron_variant
T/C 26128822 intron_variant
T/A 26128825 intron_variant
C/T 26128839 intron_variant
C/T 26128861 intron_variant
T/C 26128889 intron_variant
C/T 26128890 intron_variant
T/C 26128893 intron_variant
T/C 26128905 intron_variant
C/G 26128922 missense_variant p.Arg75Gly
C/T 26128929 missense_variant p.Ala77Val
A/T 26128945 missense_variant p.Arg82Ser
G/T 26128950 stop_lost p.Ter84Leuext*?
C/T 26128964 missense_variant p.Pro89Ser
A/G 26128975 synonymous_variant p.Arg92Arg
G/C 26128977 missense_variant p.Arg93Pro
G/C 26128982 missense_variant p.Gly95Arg
A/T 26129026 synonymous_variant p.Ser109Ser
G/A 26129027 missense_variant p.Gly110Arg
C/G 26129034 missense_variant p.Pro112Arg
G/T 26129041 missense_variant p.Lys114Asn
C/A 26129117 intron_variant
A/C 26129131 intron_variant
T/C 26129133 intron_variant
G/T,A 26129175 missense_variant p.Leu125Phe
G/T 26129178 missense_variant p.Leu126Phe
G/A 26129197 splice_region_variant&intron_variant
G/A 26129206 intron_variant
C/T 26129219 intron_variant
C/T 26129222 intron_variant
G/A 26129224 intron_variant
C/A,* 26129240 intron_variant
G/T 26129251 intron_variant
T/G 26129263 intron_variant
A/T,C 26129284 missense_variant p.Tyr132Ser
T/C,* 26129289 stop_lost p.Ter134Glnext*?
A/C 26129290 stop_lost p.Ter134Serext*?
T/G 26129295 stop_lost p.Ter136Glyext*?
A/G 26129304 missense_variant p.Ile139Val
C/G 26129316 missense_variant p.His143Asp
C/T 26129335 missense_variant p.Ala149Val
G/C,T 26129342 missense_variant p.Leu151Phe
A/G 26129381 intron_variant
A/G 26129399 intron_variant
C/T 26129419 intron_variant
T/C 26129448 intron_variant
T/C 26129453 intron_variant
C/A 26129455 intron_variant
A/C 26129490 splice_region_variant&intron_variant
A/T,C 26129491 splice_region_variant&intron_variant
T/C 26129537 synonymous_variant p.Phe169Phe
A/G 26129548 missense_variant p.Gln173Arg
G/T 26129549 missense_variant p.Gln173His
C/A 26129559 missense_variant p.His177Asn
A/T 26129562 missense_variant p.Asn178Tyr
A/G 26129563 missense_variant p.Asn178Ser
C/T 26129573 synonymous_variant p.Ser181Ser
T/G 26129592 missense_variant p.Cys188Gly
G/T 26129595 missense_variant p.Gly189Cys
G/A 26129596 missense_variant p.Gly189Asp
G/A 26129607 missense_variant p.Val193Ile
A/T 26129623 missense_variant p.Asp198Val
T/C 26129635 missense_variant p.Val202Ala
C/G 26129642 synonymous_variant p.Val204Val
A/C 26129660 synonymous_variant p.Gly210Gly
A/C,T 26129666 synonymous_variant p.Ala212Ala
A/T 26129677 missense_variant p.Glu216Val
T/A 26129680 missense_variant p.Ile217Asn
C/T 26129682 stop_gained p.Gln218*
A/G 26129683 missense_variant p.Gln218Arg
A/G 26129718 missense_variant p.Ile230Val
T/C 26129724 synonymous_variant p.Leu232Leu
A/G 26129726 synonymous_variant p.Leu232Leu
C/T 26129777 synonymous_variant p.Asn249Asn
C/T 26129822 synonymous_variant p.His264His
A/C 26129841 missense_variant p.Lys271Gln
T/C 26129877 synonymous_variant p.Leu283Leu
C/T 26129887 missense_variant p.Thr286Met
G/T 26129888 synonymous_variant p.Thr286Thr
C/T 26129890 missense_variant p.Pro287Leu
G/A 26129898 missense_variant&splice_region_variant p.Gly290Arg
G/A 26129940 intron_variant
A/C 26129962 intron_variant
C/T 26129995 intron_variant
G/A 26130018 intron_variant
C/T 26130022 intron_variant
G/A 26130026 intron_variant
T/A 26130032 splice_region_variant&intron_variant
T/C 26130043 missense_variant p.Phe292Ser
G/A 26130045 missense_variant p.Ala293Thr
G/T 26130052 missense_variant p.Gly295Val
G/A 26130066 missense_variant p.Gly300Ser
T/A 26130079 missense_variant p.Leu304His
C/T 26130114 intron_variant
C/T 26130169 intron_variant
A/G 26130188 synonymous_variant p.Thr313Thr
G/T 26130226 missense_variant p.Arg326Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_32774.1
MSRLCTTSALFFTSSEFRVLLTFFTAPFPSSPSPLDFFIFSRCVSISPSSLRVLPFPSPNLRVSPFPFSPPSRACELHKVESDVDRSHLLLHDVLDGVNNFFRGEIPQSQGHLRSLQYLRLNNNTLVGECQIYISSFEVLFGGDTSTINKHSWILKDHEEVYLGNLKRFQFRELQISTHNFSSKNILGKCGFGNVYNLPDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAILLFLKRQSQVPLLVSGKVNLFLSCDPTSMETMKHRGNGTLKVFMACLSNLFKLTKTPGIAEGLQGEDRLEALLYSAIYLKWINTGQISCFEDGGHHRPNRDAKISRLIFRELERHTTRKDISP*


CDS Sequence:
>Vu_32774.1
ATGTCGCGCCTCTGCACCACCAGTGCTTTGTTTTTCACTTCATCAGAGTTTCGAGTATTATTGACTTTCTTCACTGCTCCGTTTCCATCTTCACCTTCGCCTCTCGACTTCTTCATCTTCAGCCGTTGCGTCTCAATTTCTCCATCTTCCCTTCGTGTCTTGCCATTTCCATCTCCCAACCTTCGTGTCTCACCGTTTCCATTTTCACCTCCTTCGCGAGCTTGCGAGTTGCACAAGGTGGAATCAGACGTTGACCGGAGCCACCTCCTTCTTCACGACGTCCTGGACGGTGTTAACAACTTCTTCAGAGGGGAGATTCCTCAATCTCAGGGACACCTGAGAAGCCTCCAATACTTGAGGCTCAATAATAACACTCTTGTTGGTGAATGCCAAATTTATATTTCTAGTTTTGAGGTGTTATTTGGTGGAGACACAAGCACAATCAACAAGCATTCTTGGATATTAAAGGATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTTCAATTTAGAGAACTCCAGATTTCTACTCACAACTTCAGCAGCAAAAACATATTAGGAAAATGTGGTTTTGGAAATGTCTACAATCTCCCTGATGGTACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGAAATGCAATTGGAGGAGAGATTCAATTTCAGACCGAAGTTGAAATGATCAGCTTGGCAATTCTTTTATTTCTGAAGAGGCAGAGCCAAGTCCCTTTGTTGGTCAGTGGCAAGGTAAACCTGTTTCTTTCATGCGATCCAACGAGCATGGAAACCATGAAACACAGAGGAAATGGGACACTTAAGGTCTTCATGGCTTGCCTCTCAAATTTGTTCAAGTTGACCAAAACGCCAGGAATTGCTGAAGGTTTGCAAGGGGAAGATCGGTTGGAGGCTCTCTTGTACTCAGCTATCTATCTCAAGTGGATAAACACAGGGCAAATATCTTGTTTTGAAGATGGAGGTCACCACCGCCCCAATAGGGATGCTAAGATTTCAAGGCTTATATTTCGTGAACTAGAGCGACACACTACTCGGAAGGATATATCTCCATAG


Promoter Sequence:
>Vu_32774::LG9:26126413-26128413(+)
ACTTTTCGAATTCTTCTTTTTTATATTAGTTGTTTTCATCTTTTTCTTGGATTCGAATCCAAAAAGAGTTATAAGTTAATTAAAAGCAACCCGCGACACCACAATTTGTTGTTCTTTCTCTGTTCGATCATTTGTTTTTCACTTTAATAACAAAATTAAAATTATGGAAAACAAATGAATGAACAAAGCAAGAGCAACAAATTGCGGTGTCGCGGGTTGCTGTGTATGGGTAAGAGAGAGTATGAAGATGAGAGAGAAACAAAGTGGATAAGTGAAAAGGTGGATTAGGGTTAAGCGAGTGTTTCTAATTTTTTTCAGTTGGGGCTACAGTAGGGATAACAGAGAAAATGTTAGAGTGAGAGAGATGAAAGAGAAAGGGTTGAGAGAATGAGAAGGTGAATAAGGGTTTGGGGGTTTCTTGTTTTTTTTTTTCAGTTTTGAGAATGAAAATTATTCAAATATCCTTGACCTTACAACTTAAAGTCCATAATATATGAGGGTATTTTTGTCTACTAAAACTCGATACAAATTGCTAAAATATACCAACTGAAAAAAAGAGTGTACATAAATTAACAAACCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAGTCTTGTTTTTAATTAATATTTCTTTTTCATATGTAAATTCGTACTCTCAAATAACACATAGGACAAAGAAAAAGTAATCCACAAATTATAAGGAAATTATAATAAAGAAAAAAGAGACTAGTTTATTAATGAAAATAAAATAATAAATCAAGAAAATATTAGTGTGTTAATTGGATTGAGTTGTTCAATAATTTTATCAAGTCGATTAAATCTAATTATATTGAATTTAATTTTATTTATAATTTAATTAATATATGATTTGATCTCATCCAATCATATATGTAAATATAGTGACCAAAATCAAGTTATTAATAGATAATAATATATAGTATAAAAGTGTAAATCTATATACTACGTATTCATAGTCCTCAAAAAATTTTAAATAATATTTTTTAAAATACAAACAATTCTTATTAACGAGGAAACATTATTGAATACATGAACACATAAATGTATACATGCATCCATTCGTATTTACAACATCACAAGCTCGTTGTCGATCCTTACTACCCCCATAAATATAAACATAGTATATGATCATCGTATGTGGAAAAGACAATCACAATAATGTAAGGGCAAGTAATTGATATTGAATCATAATACATATAATTTTTTTATCATCAACTTAATTTAAACAATTTGTATCATATCATTTGTCATAATACTATTTTGTACATATCACAGAGACTAGGAACCTCCTTCGAATCTCATTGTCTAAACCTCATTCTTTATACGAGTATAAGAATTTAGTAAAGTCACAATGACTTCATGCTGGAACACCTTATATTAATGTATACACTACACTTTATAATATGGTCATTAGAATAGTTTCAGATATTTCTCAATCACACAACACACTTCAATTTCAAAGCAGTTACCCCTTTTACCTAACAGATTTACGACTTATAAACTATGTTATTCTGATTCTTAAAACTAAAACTAAAATTTCTCTTTTCGAGTTAAAATTTTACTATCATCATAAACCTAGTATGAGGACTTGTTGCGTCTTATCCCTATGAAGGGCGACTACAAGAAATAGACTTAAAAGTCTTGCATCAATGTCGAAGGTTCCCTACTTTTTCAGTCAATATGTTGGTTCTCCTATTAATTCATTTTATGGATAAACAAAATTCATTTTGTGTTCAAGTACTTCACATGTAAAAGTGAGATTGAATGATATTATTAACACTACAAAAATATAACAGCATAGTAGCGGTTCGTTTCCCGAGGTTTTAAAAACCTCTCTTAATTATCCGTGGTTGCACTACAAAAATGCAGTTAAATTTAATTTATTTTTTTTAAATATAATTATAAAGGTTTCTTTGTGAAATTTTTGAAA


Gene Sequence:
>Vu_32774(+)
ATGTCGCGCCTCTGCACCACCAGTGCTTTGTTTTTCACTTCATCAGAGTTTCGAGTATTATTGACTTTCTTCACTGCTCCGTTTCCATCTTCACCTTCGCCTCTCGACTTCTTCATCTTCAGCCGTTGCGTCTCAATTTCTCCATCTTCGTAACCCTTTGTCACTTCGCAGTCATGATTTCCTTGCCTTCTCCTCCTCCAAATCCTTAATTTCAAAAACCTGAAGCTCACCGACCTTGTGATTGACTTTTTGAGGAGCTCTCCGATGGCGTTTTTAAGGAGCTTGTGATTCGCACAGCCTTCGTGTCTTGCCATTTCCATCTCCCAACCTTCGTGTCTCACCGTTTCCATTTTCACCTCCTTCGCGTATGACTTCTCCATTCTCACAGTCCTTCTTCACTTTGCAATTCTTATTTCCCTTGTCTTTCCCTACTTCAAATCCCTAATTCCGAAAACCCAAGCATCATTAAGAGCTCGTCGATGTTGCAATTGATGTTTTTTAGGAGCTTGCGAGTTGCACAAGGTGGAATCAGACGTTGACCGGAGCCACCTCCTTCTTCACGACGTCCTGGACGGTGTTAACAACTTCTTCAGAGGGGAGATTCCTCAATCTCAGGGACACCTGAGAAGCCTCCAATACTTGTAAGCATACATGAGCTTGGGTTTGATATCTTGAGATGAATCCATTTTTAGTATCAATCTCTACTGTTTAATGCTAAAATTTTCCCAAAATTGTTTCAGGAGGCTCAATAATAACACTCTTGTTGGTGAATGCCAAAGTCTCTGGCTAACATGACCCAACACAATCTTCTGTAATACACATATGAACTCTTCTGTTTGATACTTGTATCTCATGCATAATTTCAGTTTATATTTCTAGTTTTGAGGTGTTATTTGGTGGAGACACAAGCACAATCAACAAGCATTCTTGGATATTAAAGGTACTTGCCATTTGCACACCTTGAATGAAATCAAAGTAAAATATACATCGTTATATAAGAATGTTCCAGTGCATCAAAAGTTAATTCAAGTATGGTATTGTTCTGAAATTTATGACCTTTTTGTTAACTGTTTCAAAAAGGATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTTCAATTTAGAGAACTCCAGATTTCTACTCACAACTTCAGCAGCAAAAACATATTAGGAAAATGTGGTTTTGGAAATGTCTACAATCTCCCTGATGGTACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGAAATGCAATTGGAGGAGAGATTCAATTTCAGACCGAAGTTGAAATGATCAGCTTGGCAATTCTTTTATTTCTGAAGAGGCAGAGCCAAGTCCCTTTGTTGGTCAGTGGCAAGGTAAACCTGTTTCTTTCATGCGATCCAACGAGCATGGAAACCATGAAACACAGAGGAAATGGGACACTTAAGGTCTTCATGGCTTGCCTCTCAAATTTGTTCAAGTTGACCAAAACGCCAGGAATTGGTGGAGAAAGGTACTTCAGTTCATAATACTCCCTTCCCTCAGTGCCTTCTTTAGAAACCAGTAACTTTACTTCTTAATTAGCATATTAACTTTATCCATAATTTTCACTTTGAAGCTTGGTAACGTGGTATTATAGCTGAAGGTTTGCAAGGGGAAGATCGGTTGGAGGCTCTCTTGTACTCAGCTATCTATCTCAAGGTCTTGTTCTTTCTTTTCCATTCAATCATCCATGCTCTTATTTTACCATCTTCTGAACCCTTCTTACATTATCTGTGCAGTGGATAAACACAGGGCAAATATCTTGTTTTGAAGATGGAGGTCACCACCGCCCCAATAGGGATGCTAAGATTTCAAGGCTTATATTTCGTGAACTAGAGCGACACACTACTCGGAAGGATATATCTCCATAG