Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_32627 LG9 23450224 23451245 PREDICTED: transcription factor MYB3
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/T 23450388 intron_variant
T/C 23450421 intron_variant
C/G 23450434 splice_region_variant&intron_variant
A/G 23450655 intron_variant
T/C 23450677 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_32627.1
MRKPASDIKDLNKGAWSKQEDQKLIDYINKHGEVCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIKRKLISKGIDPNNHRLDHKVPFLQNPPMSEDASEPFGTKVVEKNKPCKSPRHVYGDVSDDASGEAQSSYALPDLNLDLSIAIPSESHTISQNNLKPFRQSYSSRKLPYDSPSTLLLFQ*


CDS Sequence:
>Vu_32627.1
ATGAGGAAACCTGCTTCTGATATCAAAGACTTGAACAAAGGAGCTTGGTCCAAACAAGAAGACCAAAAACTCATAGATTATATCAACAAACACGGTGAGGTTTGTTGGCGTACACTCCCTCAGGCTGCAGGTTTACTTCGGTGTGGCAAAAGTTGTAGACTGAGATGGATAAACTATCTAAGGCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATTAAGCTTCATGCGCTACTTGGCAACCGGTGGTCACTTATAGCAGGGAGATTGCCTGGTCGTACAGATAACGAAGTGAAGAACTATTGGAATTCTCATATAAAAAGAAAGCTAATTAGCAAAGGCATTGATCCAAATAATCATCGATTAGATCATAAAGTCCCTTTCCTTCAGAATCCACCCATGTCTGAAGATGCCTCAGAACCTTTTGGCACGAAAGTCGTTGAAAAGAACAAGCCATGTAAATCACCTCGTCATGTTTATGGTGATGTCTCAGACGATGCAAGTGGCGAGGCTCAGTCATCATATGCCCTTCCGGATTTAAACCTTGATCTCTCTATCGCCATTCCTTCAGAATCACACACTATTTCTCAAAACAATCTAAAACCCTTTCGTCAATCTTATTCATCCAGGAAACTGCCTTATGATTCTCCTTCTACACTTCTTCTGTTTCAGTAA


Promoter Sequence:
>Vu_32627::LG9:23448224-23450224(+)
TGCAAAGCCATGCTTACATTGAAGTATAGATTATAAAATTATAAAAGTGTAACATATATACGTTAATATAAAAACTCTTATGTAAAATTTGAAAAGGAAAAAATCTTGAAAATAGTGTAGTAATCTTATATAAAATGAAATTATACTTTCATGGTATAACTCTTACATTAAATATACGATAAAAATAAAACATTAAAGACAGCTTGATTTCTTCTTCCAAGATATATACTAACCAATAAAATTTTTATCATTAAAATACATCTTGTTATAAAAGAGTTCTCTCACTATTAATATTACTGTTTCCGTTCTTATTTACAAGGAAAACTAAATATACATTAATTAATTAAATATATTAAATTTTATTAATCCTATAATACTTTTCATAAAATGATTTATCATCAATATTACACTTTCCTTTCTTATTTATATAAAAAAAAATTAATGTAATATAAATATATTAAAATATGATTAATTTATTATTTTTATTTAATTTTAATAGAATTTGACATGAAAAATCTTAATATAAAATAACAACATAATGATGGGATCAAGAAAGTTAACTTTTTTATACAAAATTATTAAAAGTATAATGGTTGATAAAAAAATATACCAGCATATATAGTGAGAATTAATAGTCTACTTTATAATAACTTTTATAGTCTACTTTATAATTTTAATTTTTTATGATAAAATAAGTTCTCAGTAAAAACTCATTTTATAGTGAGAATTAACACCTACGAGGCTTTGAAACTTAGTTTATTTTGTGATTAAACCGTTTTCCATAACCTGCCATTATCATCTTTAAGTTATTACTTACACGAATCAACTGATAAATGAATGAGAGTTTTAGGTATAGAGAAAGAGATGGATATAGTAAAGAGCTATGAGTGTGGCAAAAGGAGAAAATGTGAAGCATTTGCCACAGACACGAGGAGCTATAAATGTGTCTGTTAGGGAAGATCACCCACTAAACTTTTTAAGAAGGGAGTTATAATCGAATTTTGGCATAGAAACATAAAAGAAGAGAAAATCTAGCTTGTGCCATCGAACATCCACACCCACCTTTTAATCCTGTTTCGTCAAAGCAGAACAACAAAAATGAGCAAGAGAAATCTAACAGTCAACACTGTAAAGTGTGACACACACAGCCAACTTACCCCTTTCTCCTTTCTACTCTTGTACCTTTTCCATACACTACTTCTATTGTACCACCTGCTTCTACAATTTTTTTAATCCAAAACACCTAAATGACAAAACATTGACTTTCCCTTTCTCTACTATATGCTAAACAAACCATTCAAGATATATGAGTTAAATAATCTCAGAACAGATTTTCAAAATATAATTAAATAAAACTGATATATTATAACCATTGTTGTACATTGAAAACTCTTTGTTTGTTTCTCAGAATTAGATGTAGTAGTAAGTGTTGAAGTGAAAGTGATTCAATTATTGAGTGTAAAACCAAGTTGGTACTGTAGGAAGTGTATAATATTTACTCCACCATCTCTTCTCCGAACAACTGAGCCCTAATCTAGTTGCTGTGGACCAAATATCTGACAGTAAGTTAGATGCAATAAATCAACCTCACCGGCAATCACATTAAGACCAACCGTATGTCATATCCTCTAAATTTGGGAAGAAAGGATAAAGAACACCACCAATTGATTCTCCCCTTTTCCCAAACAGTGGTGTCATTGCTCTCTCTATGTCTGAAGGTGTGTTGTGAATCACGCATGAACCACGCAGTCATGTATGAGCAAAACCACCGGTCCAAGTCAACTACATACACTTCCTTAATTCCAACCAACCAACCAACCAACCCATACTATATATTCCCACCTTTCATCTCCTCACTCCTTCCATTCCTCTCCTCTCTCCTGCAAATGCATATTTCTCTTTCTCTTTCTCTTTCTCTTTCTTTACCTTATCCCACCTCGGTTCTTCCCTTTGTAGCTTCCTTTTCTCTTTCAGGTAAACCCCAGTAAACGTAGAAACAA


Gene Sequence:
>Vu_32627(+)
ATGAGGAAACCTGCTTCTGATATCAAAGACTTGAACAAAGGAGCTTGGTCCAAACAAGAAGACCAAAAACTCATAGATTATATCAACAAACACGGTGAGGTTTGTTGGCGTACACTCCCTCAGGCTGCAGGTATGGAATAAATTAATATATCCAAACTGTAACAAATTATATATAATATACATTTCACCTCATGCACTTTTTTTCATGATCATAGGTTTACTTCGGTGTGGCAAAAGTTGTAGACTGAGATGGATAAACTATCTAAGGCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATTAAGCTTCATGCGCTACTTGGCAACCGGTGCGAATTTAGTTCTGAAAACACCATGAACCCACTTTTTTAAATGTGTTTGTGAGTGTATAAGAATGAAAAAAATTTGATCATATATGTGTACTGAGCAACATTATATCATCATTGAGTAATCATCATTGAGGAATATAAATGGAAATTAAAGCCAACTTTTTCCAACGTATTGCTGAAAAGGTTTCTATTAGTTGGACTTATAAAGTAAGAAAAATAATTAATCTTTTAATATTGACTCATACAGGTGGTCACTTATAGCAGGGAGATTGCCTGGTCGTACAGATAACGAAGTGAAGAACTATTGGAATTCTCATATAAAAAGAAAGCTAATTAGCAAAGGCATTGATCCAAATAATCATCGATTAGATCATAAAGTCCCTTTCCTTCAGAATCCACCCATGTCTGAAGATGCCTCAGAACCTTTTGGCACGAAAGTCGTTGAAAAGAACAAGCCATGTAAATCACCTCGTCATGTTTATGGTGATGTCTCAGACGATGCAAGTGGCGAGGCTCAGTCATCATATGCCCTTCCGGATTTAAACCTTGATCTCTCTATCGCCATTCCTTCAGAATCACACACTATTTCTCAAAACAATCTAAAACCCTTTCGTCAATCTTATTCATCCAGGAAACTGCCTTATGATTCTCCTTCTACACTTCTTCTGTTTCAGTAA