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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_32433 LG9 18813532 18814626 PREDICTED: probable disease resistance protein At1g58390
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 18813567 missense_variant p.Asn12Lys
C/A 18813611 missense_variant p.Pro27His
C/T 18813658 missense_variant p.His43Tyr
A/G 18813847 missense_variant p.Ile106Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_32433.1
MASDIAEILKENFLEFFKDSESLNLSPTISSLLKDIEAEFSEHKGFWSPPPVESLRVLYQLDHAIAECRANKKTFSMFSCFDPVERGVLKSIKTNLHDVRNSKNNINEYSTFPLFSSCRYPTGNDAPDLSVFDGEMEKIVTWLESNNGFKAIGVHGMCGTGKTTLAKMVLSDPRVKDKYKKPIWVCLYDLQSKEEMNIRIVKEMLALLDDDPDLLAEEPEDKWLVKNLHDKLLDQKKYLIVLDAVWHCNDWFNNLFCVDQDGGDTSKELFSQALPKETGGAVIVTSRQKEVTTKLVREENLIHLKPWEDDKKLKNFVKKCLEKQDKITEENINFVAYHCHGIPFVAATISDWIAEQITKKSDSN*


CDS Sequence:
>Vu_32433.1
ATGGCCTCAGACATTGCTGAAATCCTTAAAGAAAACTTCTTGGAATTTTTCAAAGATAGTGAGTCTTTAAACCTATCACCTACTATCTCTTCCCTATTGAAAGATATAGAAGCAGAATTCTCAGAGCACAAAGGATTCTGGTCACCTCCACCTGTTGAGTCCCTACGTGTTTTGTACCAACTGGATCATGCAATTGCCGAATGTCGTGCAAACAAGAAAACCTTCTCGATGTTCTCATGTTTTGATCCAGTGGAACGTGGCGTGTTGAAAAGTATCAAGACGAATCTCCATGACGTGAGGAACTCCAAAAATAATATTAATGAATACTCAACCTTCCCCTTGTTCTCTTCATGCAGGTACCCCACAGGAAATGATGCACCAGACCTTTCAGTATTCGATGGAGAAATGGAAAAGATTGTGACATGGCTTGAATCCAATAATGGGTTCAAGGCCATTGGTGTTCATGGAATGTGTGGCACGGGAAAGACCACTCTTGCCAAAATGGTTCTGAGTGATCCACGAGTCAAAGACAAGTACAAGAAGCCCATATGGGTGTGTTTGTACGACTTGCAATCAAAAGAAGAAATGAATATTAGGATTGTTAAGGAGATGTTGGCACTTTTGGATGATGATCCTGATCTATTGGCGGAGGAACCTGAAGATAAGTGGCTGGTGAAAAATCTTCATGATAAACTCTTGGATCAGAAGAAGTACTTGATTGTGTTGGATGCTGTGTGGCATTGCAACGATTGGTTTAATAATTTGTTCTGTGTTGATCAAGATGGTGGTGATACGAGCAAAGAACTCTTTTCCCAAGCCTTGCCCAAAGAAACTGGTGGTGCTGTCATTGTCACCAGCAGACAAAAGGAAGTGACTACTAAATTGGTGCGTGAAGAGAATTTGATTCATCTTAAGCCTTGGGAGGATGATAAAAAATTGAAGAACTTTGTGAAGAAGTGTTTGGAAAAACAAGATAAAATCACTGAGGAAAACATTAACTTTGTTGCTTATCATTGTCATGGTATTCCTTTTGTTGCTGCAACCATCTCAGATTGGATAGCTGAGCAGATCACCAAAAAGTCAGATTCTAATTGA


Promoter Sequence:
>Vu_32433::LG9:18811532-18813532(+)
TATCCAGTCGCTTTTTTATGTTGCTAACGGCAATGGTTTCCATCTCCATGTTTTCGAATTCGCAAACATTTTTTTAATCAAGTGTTTCCAGTGGTGTCATTCAAGGTATTGATTAATAAAACCCCTAAATTCAAAATTTCATTTCAGTTCCATTGGACAGATGAAAAATTGGTTTGATTTAGTTGCAGATGAGCGTAGAGGGAGCTGAAGAGATGACAATAAAACCTGTTGTTGCGTTTCGGAGGGGAAGCTGGTGGTGAAGGAGCGAACGATTCTGACAAGAATACAGGAGAACATGGTGGAGACATCCACGGTAGAAGGAATGTTTCTGGGAGTAGATATAGAGAAGGAACATAGCAGACACATAGTTTCGTTAGGAACCTTGAGGGATGTAAGGTTCATGGCGTGCTTCCGGTTCAAGCTGTGGTGGATGGCGTAGAAAATGGGGGACAAAGGGGGCAAAATCCCTTACCTTTATGCCTTTCACTTCGACAGTGATGCTATCGGAGGCTGAAGTGAAGCGGAGGAATTAGGGCTCAAGACGAGTTGCGATTTGTGTTTGCGATTCAAAGAGGAGAAACACGCGATTTGCTCCGCAGGACGGCAGCGTTGTCGCAGACGGCGTTTACTCAGAATCTGAACCTAATGGTAGCGGCAACGACGTCATCAAGTGCGCATGGAGGAAGGAACGCTGTAGTGGCTAGCGGTGTCTCTAGCAACGATCGGTGCCGCCGGCGACAGTTTTGGTCGTCCAGTGGAAGGCACGGCGGCGTTGGTCATGCGGAGACAAAGTTGCGGTGGAGAAGAGACCTTCGTTTCTGAAAAAGAAAAAAAAGAAACCCTGGAGGGCTTGGGCCTCACCTAGAAAATATCAAGTGCACCTCTAAATTTCATCTATGCACCCATTCACTAACACGTTAGCATAAATATATCTATAAAATAACATGTCTTTTGCCAAATCATCAAACTCTTAACGCCGTTTGTTTCTATTTAACGGAAGGGACTAATTTGACTCAAAATTTTAAAAGTGATGATCCATTTCAAACACTTTTAAAACGAGGATTTGTCAACGAAACTAAGGACAAAATTGGCTATTAAACCTTAAAATAAACATTTTAAAATTTCTAAAAACATTTTATTGCAACTTCAACCACCATGAAATCCCCGTTTCCTTCTTTTGCATGGTTTCCATTGCGATGGCTCCCAATTATAAAATTTTGTTATACAAAATCAATATCTAAATCTAGACCATAAAGAAAAAGATTTAAGTCTTTAATAATATGATAATTTCAAACTAAAAATTTAGTTTTTAATTTTATTATTATTTGAATTGACTAAAAATTAGTCACTAAAATAGATTAAAATGACTAAAAATTAATTTCCATTTATATCACAATGAGGGATTAAAAAATTATTTCTAAATAAAAAAATATTTTTTAATGATCACTAATTATTAAAAATAAAAATGATTTTAGATATTAGTAATTTTTAGTTTATAAAATAATTTTTAATTCAATTACTATAATATTAATCTCTAAAGTAATATATATTTAATTAATTTCTTATATAGTTACTAACAGTTTGCTAAAATAATATTACACGGTAAATTAATTTATCTAAAGTAATATATGTGTTTAACAATATTACAATATTGCTATAGTAACATTTTTATTAAATATATTTATGAAAATGCTCCTAAAACTAATAAATGCTGTAGTCAGAATCTTTCTATTGCATGTTTCAGTTTGGTTTGGTTTTCAACCGTGGAAATGGAATCATTCATTTCCCTCGAAGAGAAAAGATGAAATATCTGTTACATCGTTCCAAGAAAAGAATATAATTCCAAGCTTATAGTTTTGGTGATAGATATGAGACAAACAAACAATACTATTGCCTTCTTCATTTCAACACCACAAGCTGGAAAACAAAAAGTGAAAAAAAACATTCATCATTTTCTTACTCTCAATCATCATTACCATCCTAGCTCCCTCCTTCAATCA


Gene Sequence:
>Vu_32433(+)
ATGGCCTCAGACATTGCTGAAATCCTTAAAGAAAACTTCTTGGAATTTTTCAAAGATAGTGAGTCTTTAAACCTATCACCTACTATCTCTTCCCTATTGAAAGATATAGAAGCAGAATTCTCAGAGCACAAAGGATTCTGGTCACCTCCACCTGTTGAGTCCCTACGTGTTTTGTACCAACTGGATCATGCAATTGCCGAATGTCGTGCAAACAAGAAAACCTTCTCGATGTTCTCATGTTTTGATCCAGTGGAACGTGGCGTGTTGAAAAGTATCAAGACGAATCTCCATGACGTGAGGAACTCCAAAAATAATATTAATGAATACTCAACCTTCCCCTTGTTCTCTTCATGCAGGTACCCCACAGGAAATGATGCACCAGACCTTTCAGTATTCGATGGAGAAATGGAAAAGATTGTGACATGGCTTGAATCCAATAATGGGTTCAAGGCCATTGGTGTTCATGGAATGTGTGGCACGGGAAAGACCACTCTTGCCAAAATGGTTCTGAGTGATCCACGAGTCAAAGACAAGTACAAGAAGCCCATATGGGTGTGTTTGTACGACTTGCAATCAAAAGAAGAAATGAATATTAGGATTGTTAAGGAGATGTTGGCACTTTTGGATGATGATCCTGATCTATTGGCGGAGGAACCTGAAGATAAGTGGCTGGTGAAAAATCTTCATGATAAACTCTTGGATCAGAAGAAGTACTTGATTGTGTTGGATGCTGTGTGGCATTGCAACGATTGGTTTAATAATTTGTTCTGTGTTGATCAAGATGGTGGTGATACGAGCAAAGAACTCTTTTCCCAAGCCTTGCCCAAAGAAACTGGTGGTGCTGTCATTGTCACCAGCAGACAAAAGGAAGTGACTACTAAATTGGTGCGTGAAGAGAATTTGATTCATCTTAAGCCTTGGGAGGATGATAAAAAATTGAAGAACTTTGTGAAGAAGTGTTTGGAAAAACAAGATAAAATCACTGAGGAAAACATTAACTTTGTTGCTTATCATTGTCATGGTATTCCTTTTGTTGCTGCAACCATCTCAGATTGGATAGCTGAGCAGATCACCAAAAAGTCAGATTCTAATTGA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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