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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_32256 LG9 13752094 13754059 PREDICTED: probable receptor-like protein kinase At5g47070
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Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 13752224 missense_variant p.Pro323His
A/T 13752292 missense_variant p.Asn300Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_32256.1
MNCLFFKKKSKSHPELPKGRKKKSQVVNGAPKSPSSVPSPRSIKELYREKEQSYRIFSLKELIDATNGFNSMLKIGEGGFGKVYRGTISPKDGPSPIGHKEWLAEVQFLSVANHPNLVKLLGYCSIDSKRGIQRLLVYEFMSNRSLEDHLFSVSLPPLPWPTRLQIMLGAAQGLYYLHNGLEIQVIYRDFKSSNVLLDKQFHPKLSDFGLAREGPTGDKTHVSTAVVGTQGYAAPEYVQTGHLKVQSDIWSFGVVLYEILTGRRALNRNRPIGEQKLVEWVKHYPANSSRFSTIIDRRLNNQYSLAAARKVANLADCCLKKNPEDRPSMSQIVETLNQALQDSQTQNTSPNNTPISTPSRLVSTA*


CDS Sequence:
>Vu_32256.1
ATGAACTGTTTGTTCTTCAAAAAGAAATCAAAATCCCACCCAGAACTCCCAAAGGGACGGAAGAAGAAAAGCCAGGTTGTGAATGGAGCACCGAAGTCCCCAAGCTCGGTACCATCGCCAAGGAGCATAAAAGAATTGTACAGAGAGAAGGAACAGAGTTACAGAATTTTCAGTTTAAAAGAGCTTATAGATGCAACAAATGGTTTCAATAGCATGCTGAAGATTGGAGAAGGTGGTTTTGGAAAAGTATATAGAGGAACCATCAGTCCTAAAGATGGACCTTCTCCAATTGGACACAAAGAATGGCTTGCAGAAGTTCAATTTCTGAGCGTTGCTAACCACCCTAATTTGGTTAAGCTTCTGGGATACTGCTCAATAGACAGTAAAAGAGGAATCCAACGGTTGTTGGTATATGAGTTCATGTCTAACAGGAGTCTGGAAGATCATCTTTTCAGTGTTTCTTTACCTCCTTTGCCTTGGCCAACAAGATTGCAGATCATGCTCGGTGCTGCTCAAGGATTGTATTATCTCCACAACGGATTGGAGATTCAGGTGATCTACCGCGATTTCAAATCTTCAAACGTGTTGCTGGACAAGCAATTTCATCCCAAACTTTCAGATTTTGGTCTTGCAAGAGAGGGTCCGACAGGTGACAAGACTCATGTATCTACTGCGGTAGTGGGGACACAGGGATATGCTGCCCCAGAGTACGTTCAGACGGGTCATCTGAAAGTTCAGAGTGATATTTGGAGTTTTGGTGTGGTGCTTTATGAGATCCTCACAGGGAGACGTGCATTGAATAGAAACCGTCCAATAGGAGAACAAAAGCTTGTAGAATGGGTTAAACATTACCCTGCCAACAGTAGCAGGTTCAGCACCATCATCGACCGACGTCTCAATAACCAATACTCTCTTGCTGCTGCTCGGAAAGTAGCCAACTTGGCAGATTGCTGCTTGAAGAAGAATCCTGAAGACAGACCCTCCATGAGTCAGATAGTGGAAACCTTGAACCAAGCATTGCAGGATTCACAAACCCAAAACACTTCACCTAATAACACTCCTATATCCACACCATCCAGATTGGTCTCAACTGCCTAA


Promoter Sequence:
>Vu_32256::LG9:13754059-13756059(-)
TATGCTTTTAGTCCCTCAACTATTAACCAATTTTATTTTCTTCCCATTTTAAACTTTGATCTTTGTCTTTAAAGAAACTATAATTTTTCGTTCTCCAAAACAAATGCAGTTAAAATTAGGCTGAATTAACTAACGGTATGCCACATTATTTTTTTTTTTTTTACATTAAGCCAATCTTTCCTACTTCTCTCCTTCCGTCTCCTTTCTTTTTGGCTATGGTTATATCATAATTTGTGGTGGTGGACAAGGAGGGAGTTGTGCGGCTGCGACGTCGACAGGAGGTTTAGTGAACAAGAAGAGTGGAAGAAGTTCGGCGTCAGATGCAAGGAAGGAGATGGAGGGAGAGAAGCAAGGAAATATTGACTTAGCGTTAAAAAAGAAAAAAATGATGTGGCACACCGTTAGCCAACTCAGCCTAATTTTAACACCGCTGATTTTGGAAGACGAAAATTTATAGTTTCCTTACTAATGAGGATCAAAGTGTACCAAAGTTTAAAAGAGGGACGAAAAATAAAATAGCTTAATAGTTGAACGATTAAAAGAATATTTAACCCTTAATAATATCATATTTACATGAGTTATGAATGATGACCTATTATTTTTTTGTTAACTTTTTATGTGAATGATTAATAGACATTTTTTGTGATTTTTTTATGTGAATGATTAATAGACATTGCCGTAAAAAAATCAAATTAAATAAAAATTATAAAAATTATAAAAATTAGAATTAATTTAAATATAAAAAAATTAAAAATCACTTTAAATAAAATTGATGAAAACAAAAACAAAACATTAAACCTTACTAAAATAACATTATTATGAGAGAACCCTGTTAACGATTTAACATCTACTTGATAAAAAGATAAAAGTATTTAATTATGAAGTTCAGATAGTTAATGGAAGGTTGAAAATAAAATGAATGAAAAAGCAAGAAAAGTGTTAGCAAATAAAGTAAAAAATAGTAAAATTTGAAAGAAAGGAAGAGAGGAAGAAATAAGTAAGAATGAAGAATGTGGAACCCCATGTTTGAACTTGGAAGCTCCAACGTTGTTCATAATGATATACTAATTTTTATTGTTTATTAGTTCGCTGGTTGTTGAAGACGCCACAGTCTCTTCCAACTTTGAAAGTCTTAGTACAGTCAATTCAACTCTTCTCATAAAATAATAATAATAATAATTATTATTATTATATAAACGTGTACCCACTTCACCTTCTAAGTCTCCACTCCTATCTTTATCATTATCATTACTTTTTTCACTTCTTTCTAAATTCAGACTAATGAAACTCATTTTCTCTTTTCCTATCTTTCACTCAAAGTTCACCGATGTAGCTTTAGTTTTACCATGCTTTTTGTTTTATATTGTTGGTTTTCTACACAGATTCCTTAAAATAAAGGAACAACTACCTTTTGGCTAATAAAATCTCTAATGTTTCATTCATTCATTCACACATCCTTATCATCACCAAATCTAAAAGTTTATTTTGTTTTTTGTGTTTTAAGAGGTTTAACTTTGTTGGTGTATAATTTGTTTATCTTTACTACAAATTTAATAATTCATCTTTAACAGAAGTTTTTTTTTTCTTTTTATCTTTTCATCACTCTTCAAAACGTAAATTTTAAACAATCTTTGACTGAAAATATACTCCGAATAAAATTGCAATCAACTTTGTTTTACTTTGACCCTGAATCGGACTATAGATGTCCCATAACATAACCATCAAATCAAACATAACCTTTTAACTGTTAATGTTATGTTTCTGTGTATCAGACGCGGATTTTCACGCGGTTTTCCTCTCAATTCCCTTCTTCTTATTGTTCAATTTCCTCTGCTACACGGAACAAACCCGTTTCAATTTTTTCTCTTTCTCCGTTTCATTCGTTTTCGCATTTTTCAAACATAATTTGCTTCATCCTGTTTTCATTTTCTCTTGAACGAACCCTCTGTCTTTCTATACTCTGTTCTGCTGAGAATTTTAGTAACTTGGATGATTAGAAA


Gene Sequence:
>Vu_32256(-)
ATGAACTGTTTGTTCTTCAAAAAGAAATCAAAATCCCACCCAGAACTCCCAAAGGGACGGAAGAAGAAAAGCCAGGTTGTGAATGGAGCACCGAAGTCCCCAAGCTCGGTACCATCGCCAAGGAGCATAAAAGAATTGTACAGAGAGAAGGAACAGAGTTACAGAATTTTCAGTTTAAAAGAGCTTATAGATGCAACAAATGGTTTCAATAGCATGCTGAAGATTGGAGAAGGTGGTTTTGGAAAAGTATATAGAGGAACCATCAGTCCTAAAGATGGACCTTCTCCAATTGTAGTCGCAATAAAAAAACTTAACGCGCATGGCTTACAGGTATATATATATATATATACACAAACACACCCTTCTTCAGTACCTTTGTTTTTCAATTCTCAATCTAAAAAATCTGTGGTTTTTATGACTAATATCTGCTCCGGTGACTCTATGTCCCTTCTTTTTGTTTATATTAGAATTATTGAAAGATAATGGACTATAGCAAGCGTGATACAATGTATACAAGATACAACGATTTTAATCGGTGTAGGTGGTTCTTTTACGAAAATCATTTATGTGAAAGGCAAATTCAGATTCTGAAAAACCTAAACTGAGAAAAACTTCTATTAATCATGGATGAGTTGATTTTGATGTGAGGAAAAACTTCTTTTCATGGCTGTTAGGAACTGCTTTCAATGGAAAACGAGTTTGCAGAGTGTCAGTCAAATGTGTTATGCTGTCTCTGAATTGTAGTCAACACTTGAGTACTACTTAAAGATATACTTGGTTTGGTTTCTCATGTTTGTGTTATTTTTTATATTGTATTCTGTAAAGGGACACAAAGAATGGCTTGCAGAAGTTCAATTTCTGAGCGTTGCTAACCACCCTAATTTGGTTAAGCTTCTGGGATACTGCTCAATAGACAGTAAAAGAGGAATCCAACGGTTGTTGGTATATGAGTTCATGTCTAACAGGAGTCTGGAAGATCATCTTTTCAGTGTTTCTTTACCTCCTTTGCCTTGGCCAACAAGATTGCAGATCATGCTCGGTGCTGCTCAAGGATTGTATTATCTCCACAACGGATTGGAGATTCAGGTACATTGTAGTTGAGACATGTTTCACATTTGTAACCTTGTCTGAATTGAACATCGTAGGTGTTCTAATTGATTATAATAATCTTGTCTTGTTTTAATGTTTTGTATTGGAAGGTGATCTACCGCGATTTCAAATCTTCAAACGTGTTGCTGGACAAGCAATTTCATCCCAAACTTTCAGATTTTGGTCTTGCAAGAGAGGGTCCGACAGGTGACAAGACTCATGTATCTACTGCGGTAAGTTGAACTCCTATAGTTTTTCATCGGTATTCAATCATGATTACTTCCAAAAATAAATCTGAACTATGAGACTTCCAAACCCATCCATCGTTTGCAATGAAAATGTAATCATAATTACTTATCATATATGCAAATATCAGTAACTATAACAGATTCTGGAGTTGGCAATTAAGCAGCACTGAATAGAAACCAGACTGATGATTCTGAAAACTTATCAGGTAGTGGGGACACAGGGATATGCTGCCCCAGAGTACGTTCAGACGGGTCATCTGAAAGTTCAGAGTGATATTTGGAGTTTTGGTGTGGTGCTTTATGAGATCCTCACAGGGAGACGTGCATTGAATAGAAACCGTCCAATAGGAGAACAAAAGCTTGTAGAATGGGTTAAACATTACCCTGCCAACAGTAGCAGGTTCAGCACCATCATCGACCGACGTCTCAATAACCAATACTCTCTTGCTGCTGCTCGGAAAGTAGCCAACTTGGCAGATTGCTGCTTGAAGAAGAATCCTGAAGACAGACCCTCCATGAGTCAGATAGTGGAAACCTTGAACCAAGCATTGCAGGATTCACAAACCCAAAACACTTCACCTAATAACACTCCTATATCCACACCATCCAGATTGGTCTCAACTGCCTAA

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This project is funded by the Department of Biotechnology
Ministry of Science and Technology
Government of India

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