Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_32162 LG9 12239969 12240360 probable disease resistance protein At4g19060
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 12239969 start_lost p.Met1?
A/G 12239995 intron_variant
C/A 12240012 intron_variant
T/A 12240022 intron_variant
C/A 12240029 splice_region_variant&intron_variant
G/A 12240080 missense_variant p.Glu17Lys
G/A 12240099 stop_retained_variant p.Ter23Ter

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_32162.1
MTYPTGNDAPDLSVFDGEMEKIVTWLESNNGFKAIGVHGMCGKGKTTLAKMVLRDSRVKDKYKKPIWVCLYDLQSKEEMDIRIVKEMLALLGDDPDLLAEERLVKISGW*


CDS Sequence:
>Vu_32162.1
ATGACGTACCCCACAGGAAATGATGCACCAGACCTTTCAGTATTCGATGGAGAAATGGAAAAGATTGTGACATGGCTTGAATCCAATAATGGGTTCAAGGCCATTGGTGTTCATGGAATGTGTGGCAAGGGAAAGACCACTCTTGCCAAAATGGTTCTGAGAGATTCACGAGTCAAAGACAAGTACAAGAAGCCCATATGGGTGTGTTTGTACGACTTGCAATCAAAAGAAGAAATGGATATTAGGATTGTTAAGGAGATGTTGGCACTTTTGGGTGATGATCCTGATCTATTGGCGGAGGAACGATTGGTGAAGATAAGTGGCTGGTGA


Promoter Sequence:
>Vu_32162::LG9:12237969-12239969(+)
TGAGACAGTTATCTTGATGAAAAACAATGAAGAAATTATTTGAATGTAATAATTTTGAAATAGAAATAAGATGAACAGAGAAGTTAGGAACAAAAAGAGTATTATGTAAAATCAAATTGCCTAAAATAACAGTGCCAGAAAATTCAGCAGTAACAAAACTGTGATTTGGTAAACGTATGGAAATAGGAGTAATGGGATGTAAGGAATGAAAAAGAAATTTAGAAGAACATATATGATCAGTAGCGCCACTATCTATAATCCAAGAAGAAATATTAAATGAAGAAAAAGAACCTGATGATTGTGGAGTGCATTGATTAACACTGGCCTCCTTAGTAGTAGGAGATTGAGATTGTTTCAATAAACCAAGAATGGCGTTATACTGATCTTGAGAAAAAGTGTATTGAGGTTGAGTTTTATCAGCAGAAGAATCATCAGTAGAAGTATCAGTAGGGGTGTGTGAATCACCATTAGTCATGTTGGCAGAAGAATTGGAGATAGCTAAATGAGGTTTGATGACGGGTTTATAACCTTGAGGAAGACCATATTTGAACCAGCAATTATCAGAAGTATGATTAGTTCTTTTGCAATGATCACAGTACTTAGAACGACCACCAAATTTAATATTACGTCCTCGTCCACGACCAGAAAAAGTACCAGAACGATCAGTTTTATAAGGTTTGTGTTGAGGATCGTAAGAATTGAAATTGGCCATAGAATCTTGTGGAGTTTGTGAAGACGAATTATGAAATTCACGTTCTTGTTGAAGAATCAAAGAAAAGGTTTTGGTAAGATTTGGCATGGGTTCCATTAGCATGATTTGAGAACGTACAGAAGAGAATTCATCATTTAACCCACGGAGAAACTTGATTACAGAATCATCATTACGATCTTGTTGAATCTTGATTAACAATCCACAATTGCCAGGAGAATGGCAGGTACATACAAGAATGGTTTGATATAGAGAAAGCTCTTTCCAAATTATTTGAAGACGAGTATAATACTGAGATACAGTGGAATCACCTTGTTTGCAAGAATGAATGGCTTCTTGAAGATCAGCAATACGAAACTTGTCACCATGAGAAAAGCGTTGAAGAAGATCAATCCAGATTTCATAGGCAGATTCCATCCACATAACAGATTGTTTAATAGGGAGCGTCATGGATCGTGTCAGCCATGAAATCACCATCTTGTTACAACGTTTCCAGGCTTCGTGAAGAATATCATCAGCAGCAGGGCAAGGAATAGTGCCAAGAACGAATTTTTCTTTATTCTTGGTTTCCAGAGCAACGAGCATATCATGGCGCCATTGTTGATAGTTGTTGTCAGAAAGAAGAGGAGTAACAAGAATAAGAGCGGGATTCTCACCGGGATGCAGAAACAGAGGGTTGGCAGGGTTGGAAAGATAATCAGTGGTAGAATTGGAGAAAGCCATGAGAAAAGTATTTGTCTACTGATACCATGTAAGAAAACAGAGAAAAGGGAGAAAGAGAACCAGAGAACAAAGAAGAAAAGAATTTGTATTGAGGAAAATTGAAATTAGAAAATACAACAAGGTAAAGGAATATATATACACGAAGAAAAGAAAAGAAAGGCTTCCTAGACCGAACGTCCTAAAAGGGAACGATCAATACAAAGAAGTCAAACGAAAACAAAAAACGAACGACAGAGCAAAGGACGAGCGTGTGAGCGACAGGCACTCGGACGAGCGTTCCTGTCGAGCAGTGTGAGCGACAGTCACGAGGACGAGCGTTCCTGTCGAGCAGCGTGAGCGACAGTCACGAGGACGAGCGTTCCTGTCGATCATTGAGAGCGACAGTCACGATGACGAGCGTTCCTGTCGAGCGGAACGATCGACAGGCACGATGACGATCGTACCTGTCGAGCGATAAGACGAGCGGCAATAACCAGATGAGGACGAACGGCGAGCGGCAACAATCAGATGATGACGAACGACCATAATAACTCTATCACGTGTTGAAAAGTATCAAGAAGAATCTCCA


Gene Sequence:
>Vu_32162(+)
ATGACGTGAGGAACTCCAAAAATAATATTAATGAATACTCAACCTTCCCCTTGTTCTCTTCATGCAGGTACCCCACAGGAAATGATGCACCAGACCTTTCAGTATTCGATGGAGAAATGGAAAAGATTGTGACATGGCTTGAATCCAATAATGGGTTCAAGGCCATTGGTGTTCATGGAATGTGTGGCAAGGGAAAGACCACTCTTGCCAAAATGGTTCTGAGAGATTCACGAGTCAAAGACAAGTACAAGAAGCCCATATGGGTGTGTTTGTACGACTTGCAATCAAAAGAAGAAATGGATATTAGGATTGTTAAGGAGATGTTGGCACTTTTGGGTGATGATCCTGATCTATTGGCGGAGGAACGATTGGTGAAGATAAGTGGCTGGTGA