Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31966 LG9 7916195 7920406 cold-responsive protein kinase 1 isoform X2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 7916390 intron_variant
T/A 7916396 intron_variant
T/A 7916539 intron_variant
C/A 7916704 synonymous_variant p.Arg56Arg
T/A 7916734 intron_variant
C/T 7916778 intron_variant
C/T 7916786 intron_variant
A/G 7916868 intron_variant
G/A 7916877 intron_variant
A/C 7916905 intron_variant
A/G 7916914 intron_variant
A/T 7916984 intron_variant
T/C 7917090 synonymous_variant p.Leu88Leu
G/C 7917226 splice_donor_variant&intron_variant
G/C 7917397 intron_variant
G/A 7917736 intron_variant
T/G 7918025 intron_variant
T/A 7918138 intron_variant
C/T 7918174 intron_variant
A/C 7918182 intron_variant
G/A 7918288 intron_variant
C/T 7918365 intron_variant
T/G 7918551 intron_variant
T/A 7918580 intron_variant
A/G 7918620 intron_variant
C/A 7918650 intron_variant
T/A 7918673 intron_variant
G/A 7918829 intron_variant
A/C 7918991 intron_variant
A/C 7919078 splice_region_variant&intron_variant
A/T 7919082 splice_region_variant&intron_variant
T/A 7919095 missense_variant p.Ile136Asn
G/A 7919176 intron_variant
A/G 7919214 intron_variant
G/A 7919239 intron_variant
G/C 7919343 intron_variant
T/A 7919419 intron_variant
G/C 7919444 intron_variant
C/T 7919546 intron_variant
T/C 7919550 intron_variant
G/A 7919588 intron_variant
C/T 7919598 intron_variant
T/A 7919606 intron_variant
A/C 7919613 intron_variant
C/A 7919616 intron_variant
C/G 7919618 intron_variant
C/T 7919665 intron_variant
C/A 7919671 intron_variant
A/T 7919724 intron_variant
A/G 7919734 intron_variant
C/T 7919819 intron_variant
C/T 7919842 intron_variant
T/C 7919849 intron_variant
A/T 7919877 intron_variant
C/T 7919889 intron_variant
C/A 7919893 intron_variant
G/A 7919895 intron_variant
T/C 7919900 intron_variant
T/C 7919927 intron_variant
G/A 7919945 intron_variant
T/A 7920073 synonymous_variant p.Ala166Ala
C/T 7920077 synonymous_variant p.Leu168Leu
A/G 7920223 synonymous_variant p.Val216Val
A/C 7920285 missense_variant p.Asn237Thr
C/T 7920286 synonymous_variant p.Asn237Asn
A/T 7920291 missense_variant p.Glu239Val
G/A 7920332 missense_variant p.Glu253Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31966.1
MTCFFNLFRKKGSSSGTRLTGVDLDVSEIQNVNIYTYRELRSATEGFSPANKIGQGGFGEVYKGKLRNGSLVAIKVLSAESKQGVREFLTEIKVISSIEHENLVKLHGCCVEDNHRILVYGYLENNSLAQTLIGPVISLFPMVSSCRIIILPAWDLYEAGETEKLVDAFLDGDFNVEEAIRFCKIALLCTQDSPQLRPSMSIVLEMLLGEKDVNEENVTKPGMIFEFVEAKSAWKQNGNSEENGKLMLAEGKQDESSSSETMTSFATMTFTAICDRSN*


CDS Sequence:
>Vu_31966.1
ATGACTTGTTTCTTTAATCTTTTCAGAAAGAAAGGATCTTCCTCAGGCACTCGATTGACCGGAGTTGATTTAGATGTTTCAGAAATTCAGAATGTCAATATCTACACTTACAGGGAATTGCGAAGTGCCACCGAAGGTTTTAGTCCTGCAAACAAGATAGGGCAGGGCGGTTTTGGAGAAGTCTATAAGGGAAAGCTGAGAAATGGTTCTCTGGTAGCTATAAAGGTTTTATCAGCTGAATCAAAACAAGGGGTTCGGGAGTTTTTGACAGAAATCAAGGTGATCTCTAGTATAGAGCATGAGAATCTAGTTAAGTTGCATGGATGTTGTGTGGAAGACAACCACAGGATTTTGGTATATGGCTATCTCGAGAATAACAGTCTAGCACAAACACTTATTGGTCCTGTCATATCTTTGTTTCCTATGGTTTCTTCTTGTAGAATTATAATCTTGCCTGCTTGGGATTTGTATGAGGCTGGAGAGACAGAAAAATTGGTGGATGCTTTTCTAGATGGAGACTTCAATGTTGAGGAGGCAATCAGATTTTGTAAGATTGCTCTCCTTTGCACGCAGGATTCTCCTCAGCTCCGACCCTCTATGTCCATTGTGCTTGAAATGCTTTTAGGTGAAAAAGATGTGAATGAGGAGAATGTAACAAAACCAGGCATGATATTTGAATTTGTGGAAGCCAAAAGTGCATGGAAACAAAATGGCAACTCTGAAGAGAATGGTAAACTTATGTTGGCTGAAGGGAAGCAAGATGAGTCATCTTCTTCCGAAACCATGACCTCTTTTGCCACCATGACCTTCACAGCAATATGTGATCGAAGTAATTAA


Promoter Sequence:
>Vu_31966::LG9:7914195-7916195(+)
TGTGGTAGCTTTGAGTGGATCAATTGTTCCACCACATAAGTCCAAAACCTTCCATGGCTCGACATTTATACTATATTGTAAAGGGATTGACCAAGTCCGAGTTAGTGGTGTGAAGGGAAAAATGTTTTGATATGTGTGAACGGTGGAAGATGTTCTACTAATTATGTGATTAAAAGTGTATGTTGAATTTTATTTTTCCATGTTAAACTATTTTATCATTAGCTTACCCTTGTTTTTATTTTTGTTTGTCTGTGTATTTTCTCTGTTGCGATGATCACCTTAATGAGTGTGAGCTTAGGGAAGATATCTTTTGAGTTGTCTCAACGTAAGGGTTGGTGGTGAAGCAACAACATAGATAGCTTCTTTTGTTTTTCAGGTGTAGATTTTTCTTCTCTTATAGCTTCTTTTGTTTTTCAGGTGTAGATTTTTCTTCTCTTGAAATCTCAAATTTGTTGTAAGTTATCTTCTTTGTAGTTCTTGTTTTAGTCATTTTATATTACTAAAATGGATCTTACATTAAAGAGTTCAATAAATTTTAAATTCTTATTCGATCAATAAAATAGAAAAGAAAAAAAAATTTCTTTATTTGTTTTTTATGATTATATTCAAAATTTAGATTTAATAAGTTTTATAAGAGTGTAACAATTTAAAACATATTATTTAAAATTTATATTATTTTTACTTAATAACAAAATGAGATACAAATTATAATACTATCTCCTAACTTTAAATATTATTGTATTTTATTTTTTTCTAAAAAATATAATTAAATCTATTTAATTTCTTTTCTACTTATTTTAATTAATTTTGGGATAAATATTTTATGATTTTAATAATAATAAGCATAATATACTTTCATCATATGTATGCTTAAATATACTATAGCACTAACGGAATCATAGAGGATTGTTTGTATTTTTAAAATACTTTTATTATCACTCAAGTTTTTAATATTTTAAAAATTAGGTTATATATTAGGTTATTTATTATCCAAGTAATACCTCAAAAGAAAGTCTTAAACCTTAAGAAGGTAAAAGGAATATAGAAAAAAAGTGGCATGTGGGATAGGTGGCCATAACTGCTAAAGAAAACCCTTACTCATTCTCAAAGTAACTTTTGCTTTTAATTATTAAAACCATAACTCACACACACACACACATATATATATATATATATATATATATATATATTAAAAAATATCTTTTATATAATAATATATTTTTGTTATAAAAGTAAATTTTGTGAAACTAAATTAAAAATTTTGCATATAGACCATTATGACTGAGTCTAAGTTTACCAGGTATTATTCTACTTTTGCAACTATAAGCTTCCATGCTTCCATGCTTTAAAAGTAAGTTCATTGCTGTACAAAAGAAACATGTTCTCTCTCTTATAATTCACATTTTCAAAGACTTGGTTTCAGAAAATTGGTCTTCTTCATGTAAGTTTATCTGTGGTTATAGTTCAATTTCATTTTATGCAGAAATGTAGAAGGAAAAACTAGATTTGGTTCTTGCAGTTGCTATGATTGTAGTTTGTTGCCATTTCATATATTTAATTGTTCAATATATGTCATATAGGATATACCCTTCTGTCATTTTCGAGTTTTTGTTGCACAATTGAAGAGTGATGGCAATGGAATGTTATTTTACTTGGTTACGCAAAGAAGCAAGCCAGGTTGACTTTTCATTAAGAATAAAAAAAAAGAAAAAATTGACTTTGGATTTTGATTTTTCGTATTCAATATTACTTTTTTAGGGTTGAATGTTGTTCATCATTCTTTGATGGGGGTGTTTCTATGCAAATGGTATTTCTTTAATTGCATATTACAAGTAGCAGAAGTTCCTGAAACTGCTGCTAAAAGTTTGACCAGATTTTGTTTTCAGAGTATCCCTTTGAGGCGGTTGCGATATTTTGAGAGATTTCAAGAGGATTCTCAATTATCTCTGTCACTTTTGCAGCACTAGGTTTGATTAATTGGAGCAGGAGGGTTACTCTGA


Gene Sequence:
>Vu_31966(+)
ATGACTTGTTTCTTTAATCTTTTCAGAAAGAAAGGATCTTCCTCAGGCACTCGATTGACCGGAGTTGATTTAGGTATCCTTTAATATTCATGTAGTCTTCCATGGATGAGCTTCTGTTTTGTTAAATTATTTATTCAATTGAACTGATCCAAGACTTGTTCCTTGTTGGTGGGTGTTTCCATGAACCACAAAACATAACAATCAAGTTTGGGTCACCCTCATTTCTTTATTAGTTGAATCTTCGTTTTTGAAAAGGGTTTGGGTAGGTGAGACTGTTACAGATGGCATACTTATATACCGGAAGCATGAGCCCTATTTTTTGATGCTTTGTTTTTACTATCTGATATATAGAAAACATTGATATGATCAAAATGTTCCGTGCTTTGATCAAGTTACAATGTATATGCTGCAACAGATGTTTCAGAAATTCAGAATGTCAATATCTACACTTACAGGGAATTGCGAAGTGCCACCGAAGGTTTTAGTCCTGCAAACAAGATAGGGCAGGGCGGTTTTGGAGAAGTCTATAAGGTGATTGCTGCAGTATGGTATCAGTCTAAAATTTATGAAGATTTCTTAGATCCACTAAGGCTCTGATTGGGTTAATTCTCAATAAGCTATTGTAGGAAACGAAACTAAGAAGGTAAAATGAATTGAGTTTCTTCCAGGAGCTAACAAACTTGTGCACTTAACTTTTATAGCTTATGGAGAAACTCAATACCTTTTTTTCTTGTTTTCTTCTTCTATAAGTACTTATGTAGTAGTTTATCATGAGTTTAAGTAATAAAAATGTGGACTGATAAATTTCTCCATGGTTCAGGGAAAGCTGAGAAATGGTTCTCTGGTAGCTATAAAGGTTTTATCAGCTGAATCAAAACAAGGGGTTCGGGAGTTTTTGACAGAAATCAAGGTGATCTCTAGTATAGAGCATGAGAATCTAGTTAAGTTGCATGGATGTTGTGTGGAAGACAACCACAGGATTTTGGTATATGGCTATCTCGAGAATAACAGTCTAGCACAAACACTTATTGGTAATTGAATTAATGTCATGTGGTAAGAGTATGAATTGTTAAAACAAACTATCTTAATTATGAACTAATCCTTTTGAGTTTACAGGTGCAGGCCATAGTAACATCCAATTTAGTTGGCCCACAAGAAGGAACATTTGTGTAGGTGTTGCCAGGGGCCTTGCATTCCTTCATGAAGAGGTTCGGCCCCACATTATCCATAGAGACATAAAATCAAGCAATGTACTACTTGACAAAGATCTCCAGCCAAAAATTTCAGATTTTGGGCTTGCAAAGCTTATCCCACCAAACCTGACCCATATCAGTACACGTGTTGCTGGAACAGTGTAAGCTTACCATTTTGTCTTCAATTAGTTCATATTCTGAAGTTTCAGATTTTTGGAATTTTCAGGTTTATTAGCATTTTTACCCCCATTTCGTTCTTATTTGTTCTCCTGATTTGATTTTGTAGTGGTTATCTTGCTCCTGAATATGCAATCCGAAATCAAGTCACAAGAAAATCAGATGTTTATAGCTTTGGAGTTCTATTATTAGAAATTGTTAGTGGGAGGCCTAACACAAATAGACGTTTACCTGTCGAAGAACGGTATCTTCTCACAAGGGTAAGCACCTTTATGAAAATATTGATAAGGTACTAAAAGCAATTAGATTTAGTTGAGGATTTAACTCCTATGATCGAAACTTGTCTATGTTTTTTGAATTTGAGATACACCCAATCTCCTGATTGAACCTGTGAAACTCTTTTGTCTATTTGCACAGTGAGCCATCTGATTTTGTGCCTTCTGTAAATGGTATTTGAGTTTCTTTAAAGCCTCATCTCTGCTCATAAAATCTTGTGCAATTGCTTCCACTCATTCTATTAGCAAATTTAGCCAAAGGTGTTGGTCTTCCGTAAACCACTTCAGATGGGATGCATTGTGCAGCTCCTTGGACACTGGTATTATATTTATACTCAGCCCAAAAGTATAAAATTTGCCCAAGATTTTGACTGTTTAGAAAAAAAGCTCCTGAGGCATGGCATGGATATAAGTCCAGACCATTACTTCCCCAATTTTGGTTAAAATTGGATCTTTCTTAGCCTCTTAATTGATCTCTGCAATGTCTGGCCAAAAGGGTTTTGATATGGCTTGCATTTCTTTATCCTCATTCCTCCTAGACAAGGCATCCACAACTTTGTTGGAAGCACCCACATTGTACACTATCTCAAATTCATACCCCATCAGCTTTGCCAGCCAATTTTGCCGGTTTGGAGTGGTTATTCTCTATTCTAATAGATGTCTTCAACTTTTTTGGTCTGTAAATACAGTAAATACGGTATGGTCTCCAATTTTGGATAGCTAGTAAATTTAGCAAGTGTTGAATCTGCCGAGGCCTTGCAAAAGTGTACAATCTGCCGAAGCCTTGCGAAAGTGTACAATCGCTACTTCCACTTTTCATATAATATGCCCCATATAAGACATCCTTGTTTTTCCAAAAGCACACTTTTCCTGGTTAATGCAGAAAGATTGCTTCACGAATTTACTTGGAACATGCCTCAAATGTTCCACATGGTCTACCCATGTTCTGCCACATACTGTATTAAAGAAAACAAGGACATACTTCCTAAGGAAAAACTGGTGAACATTGGTTAATCCAAAAGACATTACTGAAGATTTTTAACGACCTGGATGTGTTTTGAAAGGGGTAATTTTTTAATGGGGGAAGCCTTGCGTTCTTGTGCTTGTGCTCTAGACCTGGTCTTAAGTAGTTGGTTTATCAGAAATATATTAATATCTGTGTTAAAATTATTCTGTCTAACACATCTCTGCTTGAAAGATCTAATTCTGAAATCATTCTTGAAATGTTGGTACATTGTATTTAGGTCCTGTCATATCTTTGTTTCCTATGGTTTCTTCTTGTAGAATTATAATCTTGCCTGTAAGAGTAAAGATTTTAGTTTGTGTATGTTAGATCGTGTTTGGGCTGATGTTAAGACCTCCTCTAAAGTGTTTATTTGGATGCCATAGTGAGGAGTTCGTGCAATGTGAAAGAAATAGAAGAGATTAGCATGCATACACAGAATTTTATTTTTGATGCTCTTTCAATGGCACTTCATTTTCTTCTTCCCTCTGTTAGTTTAAGCAGTCACATCCATTGCCCGTCTTGACTTTCTGAAACTTATCAACGTGTTCAACTCTGGTATCAATCTTTAAAAAATAATTGTGGATAATTAAAAATAAATGTAAATAGGAGAAGCCATACTAGACCATGTGTTCATACCAAAGTCAATTTCCTATTCTCTATTCTTATGGTAGTCCTTTTAACTCATGTTACCTATTTCATACACATTAAGAAACAAGGTTACAATGTTGACATTAAAGTTTCAGCTAAGAAGACGGGCTTATGGGTGAAACCTCTTGGTTTTGGCCAAGAGCTGCTGTACTCTAGGGGAAACAAGTTATACTTGTTCAAGTAACATGGTTGATTCTGTCTCTATAGATTATAGTTTCAGTATACTATGCATGAAATATAAGACATTTTCAATAGCTGCAATGTAGCTATCATAACAGAATGAGCTCTAGTAATGTAAAATTTGTAGAACTAAGGCATACTTAACCTGGGATCAATTTCTTTGTGCGTCAGGGAGTGAAATCATATTTCCTCAAAATGGATTAAGGGGCTTGGATCAAACAGCATATAGATCATTCTCCTACATATCTTTGAATTTGAATTGAAAATGGATGTGGGCTTAGTGGTACTAATAGGATATTAATGTTCATCATCGTTAAGTGGATGGAAACTCAAAAGTCAATGTGTTTTACAGGCTTGGGATTTGTATGAGGCTGGAGAGACAGAAAAATTGGTGGATGCTTTTCTAGATGGAGACTTCAATGTTGAGGAGGCAATCAGATTTTGTAAGATTGCTCTCCTTTGCACGCAGGATTCTCCTCAGCTCCGACCCTCTATGTCCATTGTGCTTGAAATGCTTTTAGGTGAAAAAGATGTGAATGAGGAGAATGTAACAAAACCAGGCATGATATTTGAATTTGTGGAAGCCAAAAGTGCATGGAAACAAAATGGCAACTCTGAAGAGAATGGTAAACTTATGTTGGCTGAAGGGAAGCAAGATGAGTCATCTTCTTCCGAAACCATGACCTCTTTTGCCACCATGACCTTCACAGCAATATGTGATCGAAGTAATTAA