Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31586 LG8 48686317 48690774 PREDICTED: transcription factor bHLH128-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of stomatal movement, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, RNA polymerase II cis-regulatory region sequence-specific DNA binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, RNA polymerase II cis-regulatory region sequence-specific DNA binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, RNA polymerase II-specific, protein dimerization activity, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
T/C 48686433 synonymous_variant p.Ser4Ser
T/C 48686445 synonymous_variant p.Ser8Ser
C/T 48686917 missense_variant p.Arg123Trp
A/C 48686923 missense_variant p.Lys125Gln
G/A 48687070 missense_variant p.Ala174Thr
C/T 48687273 synonymous_variant p.Ile241Ile
T/A 48687332 upstream_gene_variant
C/T 48687639 upstream_gene_variant
T/G 48687723 upstream_gene_variant
T/A 48687727 upstream_gene_variant
G/A 48687760 upstream_gene_variant
A/T 48688013 upstream_gene_variant
G/T 48688131 upstream_gene_variant
A/T 48688133 upstream_gene_variant
A/T 48688160 upstream_gene_variant
A/T 48688472 upstream_gene_variant
T/C 48688622 upstream_gene_variant
G/C 48688630 upstream_gene_variant
G/A 48688661 upstream_gene_variant
G/T 48688898 upstream_gene_variant
G/C 48689117 upstream_gene_variant
A/C 48689170 upstream_gene_variant
A/G 48689419 upstream_gene_variant
A/T 48689447 upstream_gene_variant
T/C 48689617 upstream_gene_variant
T/C 48689707 upstream_gene_variant
T/A 48689807 upstream_gene_variant
C/T 48689847 upstream_gene_variant
A/T 48689909 upstream_gene_variant
A/G 48690135 upstream_gene_variant
A/G 48690177 upstream_gene_variant
G/A 48690315 upstream_gene_variant
T/C 48690397 synonymous_variant p.Cys300Cys
C/A 48690419 3_prime_UTR_variant
T/A 48690661 3_prime_UTR_variant
C/A 48690662 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31586.1
MYPSSSSSSSSSSSSQSMSHAPTGLTRYGSAPGSLLTTTVDALIGGSRPTPTPTPTPYYSGGDSSDSTFKDQTSYHNHALGSALLRQKSSPAGFLSHLASTPTAPTPNHNHNGAGFTITRGSRLKSQLSFTGHCQESLCGGDNTNNVVLGDHATFGMEPWDGSHSHSNSIAFSAPPTKRSKSSNSSEQDILHCLNALESQFSLPQTTLEMATVEKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQVQKLHKELENCTCGCTQSK*


CDS Sequence:
>Vu_31586.1
ATGTATCCTTCTTCCTCCTCCTCTTCCTCTTCTTCCTCCTCTTCTCAGTCCATGAGCCACGCGCCAACAGGCCTCACGCGCTACGGCTCCGCACCGGGCTCTCTCCTCACCACCACCGTCGATGCTCTCATCGGAGGATCACGCCCCACCCCCACCCCCACCCCCACCCCTTACTATTCCGGAGGAGACTCTTCCGACTCCACCTTCAAAGACCAAACATCGTATCACAACCACGCCCTCGGATCCGCCTTGCTCCGTCAGAAAAGCTCTCCCGCCGGCTTCCTCTCCCACCTAGCATCCACACCCACCGCCCCCACCCCCAATCACAACCACAATGGAGCGGGGTTCACAATCACGCGGGGTTCTCGGCTGAAGTCCCAGCTGAGCTTCACGGGTCACTGCCAAGAATCTCTCTGCGGCGGCGATAACACTAACAATGTGGTGCTTGGCGATCATGCCACCTTCGGAATGGAGCCTTGGGACGGTTCTCATTCTCATTCTAATTCCATCGCCTTTTCCGCTCCTCCAACTAAGCGCTCCAAAAGCTCCAACTCCAGCGAGCAAGACATTCTCCATTGCCTCAACGCCTTGGAATCTCAGTTTAGCCTTCCGCAGACCACTCTCGAAATGGCAACTGTCGAGAAGCTCTTGCACATTCCTGAAGATTCCGTCCCTTGTAAAATCCGTGCTAAGCGAGGCTGTGCCACTCATCCCCGCAGCATCGCCGAGCGGGAGAGAAGAACCAGAATAAGTGGAAAGCTCAAGAAATTGCAGGACCTTGTACCTAATATGGATAAGCAAACAAGCTATGCAGACATGCTCGATTTGGCCGTTCAGCATATTAAAGGTCTTCAAACACAGGTTCAGAAGCTACACAAAGAACTTGAGAATTGCACTTGTGGATGCACACAAAGCAAATAA


Promoter Sequence:
>Vu_31586::LG8:48684317-48686317(+)
TACACAAAATATTCTATTTAGATCATGCTATAAATCCTTCACCGGCTACATCCCTCAACTTGATCAAGTCAACCACATGTTAGCATTTAACTACTATGGTAATGTACTGAGTTTATGATGAAAAGAGAAAAAAAAGAAAGACAGAATAGAGTAGGCGACTAAACAAGCCAGTGGCCTCTAGTAGTGAAAAATCTTTAATAAGGCTTGGTTTTAGATAACTGTTGTAAATATTCTGTGTTACGTTTTGCTGCTTTGTCTCAAGGAGGATACCCTTGTTCATTTTCTTGACAAGTATTTGATGTGTGGCATGGCTTGAACTAAAAAAGTTGCCTTGAGAACGATGTTATTGTGCAACATATATAAAACATAAAAAGACAAGTTTGAGATGAAAATTAGAAGAAACCTGCCAAGAGTTCCAAATGGCCAGTTCCGGAAGCACGATAAGCAACAAGATCACCAAGTAATCGTGCAACTGAATAGACTTCATCTTCTTCGGCTGTACTCCTGTGTTAGTTATTAAAGGAGGAGAGGTGAGATATAGTGAGAAACATTGTGGTTGCGGGGAGAAAGGTAAGGTTTAGTTATAGGTGTATACAAATAATTGAACCGGCCCAGACAACACAAGGTCTCCCGTATGCCATGATCGAAGACCTCGCTATAGTGGCATTTCCAAGCGTGATCATGGGTTTCGTAGAAAGACCTCCATTTGATAACATCGGATCCCGTGAAGCACTGGAGTATGGCAACAAAAGAGACGAGGATGATGAATACGAATAAAGCGGTGCGGTTCAATGGGGAATCTGCATTACATTGGTAAAGATTACAGAAAGAATGGGTAGAAAGAAGGATGGAGAAGAGTGGGTTCCAGAACTGACTCACCTACGACCTACCTAAAAGACAATGATTGGAGGAGGAGAAATGGCGAGTAGAGTCGAGAACAAGGTAAAGCGCAAAGAGAAATTGAAGGAGGGTAAGGATGGCCGAAGATCGACTCCAGCAGAGCCATTTCTTGTACATGGCCTGTTAATCGATCGATTGGAAAATGAAGAACGAAAGAATGAAGATTGAAAAAAAAGAGAGGAGGAGACGTGATTACCCACCCGTCTGCGGAGGCGTGTAAAGAGATCGTTGGAGTCTTGAAGGATGAGGGTGGCCGCGGCTTCTTGGGCGAATGCGGTTTGCAACATGACAAGAACCCTAATTGGAGCGGCGAGGGAGACAAGGAGGGCTGGAAAGGCAATGCGGCCATGACAGAGGCGGTGAGTTTGGAAGACGAAGAAGGCACCGATGAGAAGCACTGCCATGTTGGAAACTCCGACAACCAAGCTCCACCGGCTGAGGTTTCTCACAGCCAAACCCATACCCGTACCCGTTACCTGCACCAATCACAATTCAAATCATCCATCCCCATGCTTTCAACTTCACAATTCCTCGTTTCCATGCACGGGAACGGTAAACAATTCCTCCCACAATTCCTTAAATGAACCACAACTTCGCTTTTTAATTAAAATAAATAAATCAACCAAACATAAAAATTAAATGCTATATTTCATCTTGCAATCTTACAATAATAATAAAAAAAAATGATCCAATAGCACGGTGACCCCCACGAAACTACCAAAGAGGAGAGAAACTAATCGATAAGAAAACAATATTAAAATATGTTTGAAATAGTTAAGTCTGTTAATTAACTGGAAAACATTAAGTTAATTAATATCCGTACACATTGCATTAAGCAATTTAAGCATTTAAAAAAGTGGGAATATAAAAATAAAGAAAAATAGAAAGGAGAGGAAGAACCGGAGGTGGCGGAGAGAGTGGATGAGGAATCAAAAGATTCTGTGGGAATGAGGGCGACTTTTGTTAGCATTGGCATACGATACTATGAATGGGGTCGTGTTTGAAAAAAAGTGGCACGTGACCCAAATGGCAGTCAGCCAATGCAATTGCACAATGCGCAGGCAGTCTTAAAGTATTCCACAAGTGGCATACACCCACCA


Gene Sequence:
>Vu_31586(+)
AATGCCATCGCATCCATCTCTATCTAAATTGTTTATTTCTAAATCCTCCAACCAAACCAACTTGCTTTCTACTTTCTCCATCTCCCTCTCCACTGCTCTCCACCCATGTATCCTTCTTCCTCCTCCTCTTCCTCTTCTTCCTCCTCTTCTCAGTCCATGAGCCACGCGCCAACAGGCCTCACGCGCTACGGCTCCGCACCGGGCTCTCTCCTCACCACCACCGTCGATGCTCTCATCGGAGGATCACGCCCCACCCCCACCCCCACCCCCACCCCTTACTATTCCGGAGGAGACTCTTCCGACTCCACCTTCAAAGACCAAACATCGTATCACAACCACGCCCTCGGATCCGCCTTGCTCCGTCAGAAAAGCTCTCCCGCCGGCTTCCTCTCCCACCTAGCATCCACACCCACCGCCCCCACCCCCAATCACAACCACAATGGTAACGAACTTATTCTTCCTCAATTATTATTATTACTGTAAATGATCCTTTCGGCCTGGGCCCACTTCTTTGAGCGGGCCCGGCCCAATTGTCTCTCCACGTGTCTCATCTTTACTCAACGCAACGCAGGAGCGGGGTTCACAATCACGCGGGGTTCTCGGCTGAAGTCCCAGCTGAGCTTCACGGGTCACTGCCAAGAATCTCTCTGCGGCGGCGATAACACTAACAATGTGGTGCTTGGCGATCATGCCACCTTCGGAATGGAGCCTTGGGACGGTTCTCATTCTCATTCTAATTCCATCGCCTTTTCCGCTCCTCCAACTAAGCGCTCCAAAAGCTCCAACTCCAGCGAGCAAGACATTCTCCATTGCCTCAACGCCTTGGAATCTCAGTTTAGCCTTCCGCAGACCACTCTCGAAATGGCAACTGTCGAGAAGCTCTTGCACATTCCTGAAGATTCCGTCCCTTGTAAAATCCGTGCTAAGCGAGGCTGTGCCACTCATCCCCGCAGCATCGCCGAGCGGGTAATTTCTCGACTACTCCTACCTTTTTCTTTTACTTTCTCACTCCTCCTTCTTCTATTCAATTCCATCCACTTCAAACACAGGAGAGAAGAACCAGAATAAGTGGAAAGCTCAAGAAATTGCAGGACCTTGTACCTAATATGGATAAGGTATTGTTTCTATTTCTGTCTCCTTCTTTTCTTATGTCAAACTACTCTCTTAAATGGGGAAGCTCTCTTAATCTTGTTTCTAAATGTCTTTAATTCATTGTAGCAAACAAGCTATGCAGACATGCTCGATTTGGCCGTTCAGCATATTAAAGGTCTTCAAACACAGGTTCAGGTCTGTGAAATAACCTTACCCTTTCCCCCCTCTCTCTCTCTCTCCAATACTTTTCATTCCCATGCCTATTCAGGAATTATCAATTAAATGCTTCCAATATATGAAATCGCTATACAAATTATATATCTACAATCACGGTGTCTTGTAACATGCTTGGGTGAGAATTGGACGACATTGGTATTAGAAGGTTACTGCATTTGGTGTATGATTTCAGTAAAATATGAATTATTTTTATTTTCTAAATTGAATTCAATTAAAATTTCCCTTTTTCAGTGCATCCCTATATCCATTGTTGTGTTAGGCTTTTTACCAACCCCCTTGCGGATGAGGTGTGTTAAGTATGCTTACCCTTCATTGAATGCTAATTTACTGAATAAATCTGGAGTCGTTAGTTTTAGAAGAAATATGCAAATTAAGTAATCTATAAAGTAATTGCTGGAGGAAAGTGCTAGTAGTAGTGCCCACGAGAAGGCAGAAACAATGCATGCGAAACATAGGTGTATCAAACATAAATATGACCCCTTGACGGAAATGCGAAACAGGGCCACGTTAATGAACAAATGCCCCCCCCCCGGAATTTCATTTCAGTTGTCTCCACCAATCAATTCCCTGTAAAATAAAAAATGTTGCTAATGGTTGTGAAGCCTGAAGATTACTCAGCTGCTGGTGGAAAAATAGTTCAATATCAAGCTTGGGATATTTTAGCACCCCTAAATCGTGCGTTAGCTCTTGAAAACAAACAACTTGCTGATACAGGGCAATGTTACTGTCCTCCTTTGAGATTGTCGTGCTATCTGGTCACTTCGAACAACGCTATTTTTCTCACGTAGCTAGCACCTTTCCACACTGGCAAGCAAATCCGCCACCAAGACCTCTAGCCATCATTATTAACCCGTCAGCCAATCACCACTTCCTTCTGTAACATACCAAATGAGCTAACATAAACCATATCCTAAATAATCAAAGTTTTAGACTGCAAAGGAAACCAACAAATCAATATAGCACAACTGTATTCACTTTCTTCTAGCATGGCTAGAACTAATGCTTCTGACTACCCGAATTATTCTCCATTCTCCCATGTCATGCGCGTGATACACATCTTTACAAGTTGTCAGAATTAGTAGTTTTCCATTCCCCGAGCCAATTAGCCCAGTCTCAATCCCTTAACTCTTCTCTCCTCTACAAAGCTGCCGCACTCTAGCTCCATTAGGATTCAGATAGTCAAATTTCACCCTATGGATAATTTTGCAAACTTCAACAACTTTTTGTCTTTTTACGAGGGACAACGGACCATGGTAAACTAGTTTTAACTTCCCTTGCTGTTCCGACCTTAAGTCCTTAATATAGTTGGGGTCACCGCTACATCGAAGTGACTTTGTCAAAAGTTGCCTTGAAAAGTCTTCTCATTGGGAGTTAAGACCAAAGATAAAGGACAAAATTTAACGTAGGTGATCTTAGCAATGTCAATGGTAGGAACGTAGGTGTTACGTGTACATTTAAAACATCATTTTATGTCAGGCAGCTGGTTTCATCGAGTATCACCTTGCATGATGAATTTTTTGTTGCATACCGAATACTGGAATATTTTATATTTATTTATAAGTAGCGATGCATTAACATAACCTTCGACTACAATTTTACCCGGTTATATTTTATATTTATATTTACCATAAGCTGTGATGCACTAACAACAAACCTTTACTACACTTTTTACAAGACGAGACTACTAATGCTTTATTTAGTCTTTTAAACAGTAATAATCTATTAAATTGTTCTTTAAAATAAATAGAATAAATAGTAAGTAAGCTTGTCCTTAAAATTGTACATTTATCAATTTAGTCCTATAAAACATAATAGATGGTCAAATTGATATCTGAAATTGATAAAAGATAATATGGTCCTTAAAATTAATTACATATTAATCTAGTCTTTAAAATTGCAATCGTAAAACAAATTGATTCATACTTATAGATATTTAGTTGTACTTTATTATTTTTAATTTACTTGCGAATATAAGCCTACATACAGGTAAAAAAATGAATTTAAGCTTTTATGTTTAAGGTTCGAATTATCTTATACAATTTGAAAGACTAAACTGATTGATAACTTAAAATGTTACGGACTGTTTCATCATTTTATTTATTTCAGGGGTTAATTTGACCTTCTATTACGATTTAAAGGACTAAATTTATGGATAATGTACTTTTTCAGGGATCAAATTGCTATTTTATTAATTTCGTGAACCGTCTTATTATAACTTCAAATACTGAATTGGAGGTTTACTCCTTTTAACTAAATGTTTTTTACTTACTATTCATTTATTTTGTTCTGTCCACATTGCTGAACTTAATCAATATTTACTTGTACAGAATTTGTTTATGAGTAGCATTATCCTCTAGAGAAAATTATATTCATACAACCAATGTTTATTACAACGGTTCATACAAACAAGAGGAGGACAAGAAAAAAGTAGTGTTCTTTAACTTCTTGTATAATTTTGTTTTATCAATATGATATTTCTATCCCACTCGAGGTACAGGTTGAAGCTGTAATTTTTTTAGCAGTAGAATTAGAAAGGACTGGATGTGAAAAGTCGCATTGAATCTTTAACAGAGTAGATTGTGGTCTCCTTAGTCATGATTCCAGAATTGTTTTCCTTATAGAGTTTTACATATCATGAAGAATAAGAATTACAGAGTAATTCAAGCATTGGTTAATTGCTGGTCTTGATAACAAGATTTTTTTTTTCGCCCTCTTTCAGAAGCTACACAAAGAACTTGAGAATTGCACTTGTGGATGCACACAAAGCAAATAACATATTGTTTTACCAGATTCTATGCAAACGCGCATAGAAGTCAAGGTTTTGACGGCAAAGCAGGAAAAGTGATTTTGTACCGACCTACTTAAATGAATAATGAAGGAACCGAACGTCTGTAGATTGTCAATTCTACAATTGTACATGTATGTTGTAATATGGTAGTCTAGGAAAATTTGTTCGTTTTCTTCAAGAATTGTCTTTTTTAAAGTCCAGGTTGATTTTCTTTGGAGGTTGTTTCTTCCTTTGTTTGGATAAGTATGGTACAAGGAGTGATTAATTTAATTTTTGGAATCATGACCAGAGTAGAAGTGAGAATGGGATGAATTAGAGAATGAAACATCCAATCCTGTTCA