Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31479 LG8 47865543 47867205 PREDICTED: WUSCHEL-related homeobox 8-like isoform X1
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 47865626 synonymous_variant p.Glu28Glu
T/C 47865789 downstream_gene_variant
T/A 47866338 downstream_gene_variant
T/C 47866346 downstream_gene_variant
T/A 47866387 downstream_gene_variant
A/T 47866721 stop_gained p.Lys179*
C/A 47866857 missense_variant p.Pro224His
C/G 47866901 missense_variant p.Leu239Val
T/C 47866913 missense_variant p.Ser243Pro
C/A 47866940 splice_region_variant&intron_variant
T/C 47867040 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31479.1
MVNVVELQKQLQRWQQSGNNVNVDANGELMYVKVMTDEQLETLRKQIAVYATICDQLIEMHRTLSAQQDLAGARLGNLYCDPLLTSGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQHGQISETNVYNWFQNRRARSKRKLQNVAPSNTESEVDTEVDSKDKKTKPEEFLSQHNITTSGGSEKLCFQNPQVYSDLQYLNTDSNKPYSMFPSDGSLKSTRNLTHVSLFNQVLSNSRSEYAGGKMEVGGTVSYNLFHQTGDCNLGSDF*


CDS Sequence:
>Vu_31479.1
ATGGTGAACGTGGTGGAATTGCAGAAACAGCTGCAGAGGTGGCAGCAGAGTGGCAACAATGTCAATGTCGACGCCAACGGAGAGCTCATGTATGTCAAAGTCATGACTGATGAACAGTTGGAAACTCTGAGGAAACAGATTGCTGTTTATGCCACCATTTGTGACCAACTTATTGAGATGCACAGAACACTCTCAGCTCAGCAGGATCTTGCAGGGGCTAGATTGGGAAACCTGTACTGTGATCCATTGTTGACATCTGGTGGACACAAAATAACATCAAGACAAAGGTGGACACCTACACCTGTGCAGCTTCAGATTCTTGAACGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAAGAGATAACTGCTGAGCTGGGCCAGCATGGTCAAATTTCTGAAACAAATGTGTACAACTGGTTTCAGAATAGGCGTGCTCGATCCAAAAGAAAACTGCAAAATGTGGCTCCTAGCAACACTGAATCAGAAGTGGACACTGAGGTTGATTCTAAGGATAAGAAGACAAAACCTGAGGAGTTTCTGTCTCAACATAACATAACAACTTCTGGAGGATCCGAAAAGCTGTGCTTTCAGAACCCTCAGGTGTACTCTGATTTGCAGTACTTGAACACTGATTCCAACAAGCCGTATTCCATGTTCCCATCAGATGGCAGTTTGAAATCCACAAGAAATTTGACTCATGTCTCTCTTTTTAATCAGGTGCTGTCAAATTCAAGGAGTGAGTATGCAGGTGGAAAAATGGAAGTTGGTGGAACAGTGAGCTACAATTTGTTCCACCAAACAGGAGATTGCAATCTGGGGTCTGATTTTTAG


Promoter Sequence:
>Vu_31479::LG8:47863543-47865543(+)
TTCTATGCACATCTTCCTCTCTTCCATTTCCGTTTACCTTTCTCTCTTCCGTAAAGCTTCTTCTCCATTTCTCCATTTCCGTTTATCATTTTCTCTTCCGTAAAGCTTCTTCTCCATTTCTCCATTTCTCCATTTCCGTTTATCATATATAACATTTAAAATTATAAATTTAAATATAAATTACTGTAAATAAAATAAACAAATAAAATAAAAACGAAACGAAAAAGCAACGCTGCCTCTGGACGGATGACATCCTTCAACGGATGTCAACATCCGTTTAAGGCAAAACGGATGTCGACATCCGTTTCGCCTTAAACGGATGTTGACATCCGTTGAAGGATGTCATATGTGGCTTATTGCAGGTGGCAGAAGAACACATCAGTGGGGGAGGGTATGGAAACATGATGAGAAAATTTGGTCTTTTTGTGGATCATGTTTTGGATGTTGTGATTGTGGATGCTGAAGGGAGAGTCTTGGACAGGAAGAAAATGGGGGAGGATCTTTTCTGGGGGATTAGACGAGGTGGGGGTGCTAGCTTTGGGGTCATTGTGTCGTGGAAAATCAAGCTGGTTCCCGTCCCTGAGGTTGTCACAGTTTTTAGAGTTAAAAAAACATTGGAACAAGGGGCTACTGATGTTGTTCATCGATGGCAGTATGTTGCCGGTAAAATACATGATGGATTGTTTATAAGAGTGGTTCTTAGTGCTGTCAAAAGGAAGGGTCAGAAGACAATCAGAGCCAAGTTCAATGCCTTATTTCTTGGAAATGCTCAAGATTTGGTTCGCGTGATGAGTGATAGCTTCCCTGAATTGGGTTTGGTTGGTGAAGACTGCATTGAAATGAGTTGGATCGATTCGGTGTTGTTTTGGGACAACTTTCCAGTGGGAACTTCGGTTGATGTTCTCCTTCAAAGGCATGATACACCTGAGAAATTCTTGAAGAAGAAATCAGATTATGTGCAGAGAACTTAAAAAACAATAATTTTAAAAATAAAATTTTACTGAGGGGCAAAATAGTAAAGGAAAGGTGGAAGAAGGGGCAAAAAAGTAAAGGGGAGGTGGAGGAAGAGATGTGTGGGGGTGGAGGGAGCAACTCCCTTTGGATTTTGACCTTAAGTTTTAACCTTAATAGGTAGTAGGTGAGAGATCCTAACCTTTTAATATTATATAATATATCTGACGGTTGAGGATACGTGGTTCACCAAAGACCATCTCCTTCCTCCAGATGTTGTCTTATTAAGATTGACTTACATTTAATATCAGATAAAAAAATTTAAATTATACCAATAATATAGTTATCTAAAACTAGGAAATAAAAATAAAAATTATTTAATTAAAAAATATATGAAATGATACGAGGTAAGAACATGTTATCATTGATGAAAACAAGTTCAATAATAATAGTAAAATTGAATTTTAATTTATTTTAATATTTTTTTTTATAAATTTACAAGTCAGAGAAACTGCAGCAAGCTATAATTTTTACACAAACTAAAATAAATAAGAAAAATGTAATCTTATTTGGAGAAGTACTTAAATAAAATTATTAAGAAAAACACTCATGTTGGAGATTGTAGGACAATCATGAAGTGGTCCAAACAAAAGCTACATAATTTAGGTCTGAACGTGGAATTTGATTTGAATAACGTTGTTTCTACTGTACTAGATTTTTACCTCTCTTAATAATATTATTCAATATTTTTCTATTTTTGTATTTTTTATTATAAAAAGAGGTTATAATAAGTAGGCACCGCAGAAATAATATAAATAAAGAATAAAGAAGGAAGGAGTCACATGTGGCACAGCGTTAAAGAGGATCAAGTTTCTCGTTTAAAATGTCTGTATCTTTTGTCTGTTTCTCTCGCTTTCTCCTTTTCTGACAACCTTTGTGGACTTCTCTTTCTCATTCTCTCTCTTCATCAAATCAACAACACCATCATAATTCAGAGCACAATCATCGTCACAGACAGACAAAGAAGACAGAAGAGAAAGAGAAAGAGA


Gene Sequence:
>Vu_31479(+)
ATGGTGAACGTGGTGGAATTGCAGAAACAGCTGCAGAGGTGGCAGCAGAGTGGCAACAATGTCAATGTCGACGCCAACGGAGAGCTCATGTATGTCAAAGTCATGACTGATGAACAGTTGGAAACTCTGAGGAAACAGATTGCTGTTTATGCCACCATTTGTGACCAACTTATTGAGATGCACAGAACACTCTCAGCTCAGCAGGATCTTGCAGGTTCATCTTCTTTTTTTCTTTCTTACTTTCTGTTATAATTATGAACTATACCAGATTTTCTTCTAACATAACCAAATTCTCATGGTATCTTGTTTCTTATTGGCTGTTTTGACTGATAACCTTTTCATCTTCTCTTTACCATTTTTCTCAGTTTGTTTTTTCATCTGAATCGTGTTTCATGGGATTCCAGTTATCAACGTACCATTACTGCTACTGTTGTTTTTATTGTTAATATTATTTTTCTGGTATTTCCACTTTGTACTATTTAAGCCAGCCTGTTTCAACAAACTAGAAAATGACAGGAAAAAACATCAGCCACACCTTTTCCCCCCATACACAGGGCACATTGGATTTCAAATTTGTAATCATAAGCAAGAACCATACCTTTCGTGCTTTAATTGGTATTTCTATAAATGTTTGAACAGTATGTTATGATTAAGAACAGTATGTTATGTTTAATACTACTGATTCATTTTCTTGCATTTTCAGTTCATTCCAGTAATATTATCTTATCCTGTCACACTTAAAGTGACAGATATTTGCAATAGAGGAGTTTTCTGAATATCAAATATAAAACCTGGTTGATTATTGATCCAGCGTTATCTGCAGAAAATTGATGTTTTGATCTGTTTTCTTCATCAGGGGCTAGATTGGGAAACCTGTACTGTGATCCATTGTTGACATCTGGTGGACACAAAATAACATCAAGACAAAGGTGGACACCTACACCTGTGCAGCTTCAGATTCTTGAACGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAAGAGATAACTGCTGAGCTGGGCCAGCATGGTCAAATTTCTGAAACAAATGTGTACAACTGGTTTCAGAATAGGCGTGCTCGATCCAAAAGAAAACTGCAAAATGTGGCTCCTAGCAACACTGAATCAGAAGTGGACACTGAGGTTGATTCTAAGGATAAGAAGACAAAACCTGAGGAGTTTCTGTCTCAACATAACATAACAACTTCTGGAGGATCCGAAAAGCTGTGCTTTCAGAACCCTCAGGTGTACTCTGATTTGCAGTACTTGAACACTGATTCCAACAAGCCGTATTCCATGTTCCCATCAGATGGCAGTTTGAAATCCACAAGAAATTTGACTCATGTCTCTCTTTTTAATCAGGTGCTGTCAAATTCAAGTATGTACCATCTTGGGCTTTTTTGATTCTTCATCAGCAATCTTTACTGAACCAATCAATGAAAATAAAATGAATCAACATTTTTTAACTAAAAATTTGAAAAGGGGTTATATATTTCTACTGTAGCAGATCATCCTCAAGGTTGCTCCTGTTATTTTCTGTGTTTCTTTTGCAGGGAGTGAGTATGCAGGTGGAAAAATGGAAGTTGGTGGAACAGTGAGCTACAATTTGTTCCACCAAACAGGAGATTGCAATCTGGGGTCTGATTTTTAG