Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31410 LG8 47306695 47308987 PREDICTED: transcription factor ABORTED MICROSPORES
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 47307013 missense_variant p.Phe82Leu
C/T,* 47307084 intron_variant
C/T 47307100 intron_variant
G/C 47307105 intron_variant
C/T 47307137 splice_region_variant&intron_variant
A/G 47307161 missense_variant p.Tyr101Cys
A/G 47307209 missense_variant p.Gln117Arg
T/C 47307255 intron_variant
A/G 47307300 downstream_gene_variant
C/T 47307458 downstream_gene_variant
A/*,C 47307494 downstream_gene_variant
A/C,G 47307496 downstream_gene_variant
C/A 47307531 missense_variant p.His148Asn
G/C 47307698 synonymous_variant p.Val203Val
G/C 47307722 synonymous_variant p.Gly211Gly
T/A 47307800 synonymous_variant p.Ser237Ser
A/T 47308009 missense_variant p.Glu307Val
A/G 47308010 synonymous_variant p.Glu307Glu
A/C 47308220 missense_variant p.Gln377His
C/T 47308341 stop_gained p.Gln418*
G/A 47308568 synonymous_variant p.Gln451Gln
C/A 47308679 missense_variant p.Asp488Glu
T/A 47308684 missense_variant p.Val490Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31410.1
MNIIMQNLVERLRSLVGLNGWDYCIYWKLSEDERFLEWLGCCCGGTESNKNGGEEHLFPVSSVVSCRDTTYPHPRTKPCDLLSQLSTSIPIDNSGIYTQTLLTNQPSWVNYSNSLDSSILDETMGTQVLISAPGGLIELFVTKQVAEDHQVIDFVKSQCIEAVNHSMSFNIDVNSMSNMQQNPLLGDENEGNNSRNTHFHPSDVMTMDHRIGLCSSPLNFMQQFNYNQLNRMKSDAFSEEYQGSFFHDKQTNPEDEHDNTYQKSLMTTDSQYMESLEAKEKQEEDKELLKHVVARSDSMSDCSEQNEEEEDGKYRRRNGKGNQSKNLMAERKRRKKLNDRLYKLRSLVPRISKLDRASILGDAIEYVKDLQKQVKELQDELEENADTESNCINGNNDNNNNQYVGVGELCPNSEPIKGQSGLHVGTSGNGYVYKQKEDAALIEKQTQQMEPQVEVALIDGNEYFVKVFCEHRPGGFVKLMESLNTIGMDVVHATVTSHKGLVSNVFEVEKKDNETVEAEDVRESLLELTRNRYRGWSHEVTPTSENAVGRDQHQIPSFSHHFHT*


CDS Sequence:
>Vu_31410.1
ATGAACATCATCATGCAAAACTTGGTGGAAAGACTAAGATCCCTTGTGGGTTTGAACGGATGGGATTACTGTATCTACTGGAAATTGAGTGAAGACGAAAGGTTTCTGGAGTGGTTGGGTTGCTGTTGTGGTGGCACCGAAAGCAACAAAAATGGTGGTGAAGAACATCTTTTCCCTGTGTCTTCTGTGGTTTCATGCAGGGATACCACTTATCCACACCCCAGAACAAAGCCCTGTGATCTTCTTTCCCAACTTTCCACTTCCATACCCATAGATAATTCTGGGATTTATACACAGACCCTATTAACAAACCAACCCAGTTGGGTGAACTATTCCAATAGCTTGGATTCAAGCATTTTGGATGAAACAATGGGGACCCAGGTTTTGATTTCAGCGCCAGGTGGACTAATTGAGCTGTTTGTAACCAAACAAGTGGCCGAAGATCATCAAGTAATAGATTTTGTCAAAAGCCAGTGCATTGAAGCTGTGAACCACTCAATGAGCTTCAACATTGACGTGAATTCAATGAGCAACATGCAACAAAACCCACTTTTAGGCGATGAAAACGAAGGGAACAACAGCAGGAACACTCATTTCCACCCTTCGGATGTGATGACCATGGACCACCGCATCGGGCTGTGCAGTTCTCCACTGAACTTCATGCAGCAGTTCAACTACAATCAGCTGAACAGAATGAAGAGCGATGCCTTTTCTGAAGAATACCAAGGTTCCTTCTTTCATGACAAGCAAACAAACCCCGAAGACGAGCATGACAACACGTATCAGAAAAGCCTCATGACGACAGATTCACAGTACATGGAGTCTCTGGAAGCAAAAGAGAAGCAAGAGGAGGACAAGGAGTTGCTGAAACATGTTGTTGCTCGATCGGATTCAATGTCAGATTGCAGTGAGCAGAACGAAGAAGAGGAAGATGGAAAGTATAGGAGGAGGAATGGGAAAGGGAATCAATCCAAGAACCTGATGGCCGAGAGGAAGAGAAGGAAGAAGCTGAATGACAGGTTATACAAGCTTCGTTCTTTGGTTCCACGGATCTCAAAGTTGGACAGGGCCTCAATCCTCGGAGATGCTATTGAATACGTAAAGGATTTGCAGAAGCAAGTGAAGGAGCTGCAAGATGAGCTTGAGGAGAATGCAGACACCGAAAGCAACTGCATCAATGGAAATAATGACAACAATAATAATCAATATGTGGGTGTAGGTGAACTATGTCCAAACTCTGAACCTATTAAGGGCCAATCTGGGTTGCATGTGGGTACCTCAGGGAATGGCTATGTATACAAACAAAAGGAGGATGCAGCATTGATTGAGAAGCAAACCCAGCAAATGGAGCCGCAGGTGGAAGTGGCTCTGATAGATGGGAATGAGTATTTTGTGAAGGTATTCTGTGAACACAGGCCTGGTGGGTTTGTGAAATTGATGGAGTCGTTGAACACTATTGGCATGGACGTGGTGCATGCCACGGTAACCAGCCACAAGGGTCTGGTGTCAAATGTTTTTGAAGTCGAGAAAAAAGACAATGAAACTGTCGAAGCCGAAGATGTAAGAGAGTCGCTGCTGGAGCTGACGCGGAACCGTTACAGAGGATGGAGTCATGAGGTGACACCTACGTCGGAAAATGCTGTCGGAAGGGATCAACACCAGATACCATCCTTTTCCCACCATTTTCATACTTAG


Promoter Sequence:
>Vu_31410::LG8:47304695-47306695(+)
TAAAAAATTAAGTGAGAAACTAAGATATTATACAAAGAATACTAGGTACTGTTTTCAGTGTTTAATCATTCAGGTATTAGTCTACTGTTTTCCGTGTTTAATTGTTCAAATCCGCTTTTATTTCTTATTATAAAAAAATTTGGAAATTATTCTATTTAAGAATTTATTGTTTATTAATTATTGTTGTAATTCATAATCTATGAACCAACACCAAACTAAATATTTTGAAATTCACGCTCATTTTTTGTTGTTTTCAGTTTTAATGCGTGTCAAAATAACCTTCACAATCTTCTTAAAGAACCTGATTTCTTGACACTATAAATTTTATACTCCCACTCTGTAATGCATTTTATTAACCATAAATTTTATACTCTCACTTTACTACCCGTTTTATTACTTTTCTTTTGTATTTAATCATTTAATTTATATTTAAATTAAGTAACTTAATTTAATACAATATTATTATTATTCATTATGATGTAAAAGGAAAATATAGTGTTTAAAAGATCTTTTTCCTTTCCTAAATGACACTCCCCTCAATATGTTATAATTGGAAGTTACACTTTTTCTTTTACATTATTCATTTCACAATCTTAAATAATAATAAAATATTAAATTAAATTATTCAATAAAAATATAAACTAAATTATTGAATATAAAATTAATATAGTCGGTTATAAGACGGAAGTATAAATTTAACTTATTATAAAAAAGAATAATCACTCATGGATAATAAAATAATATTGAGACTTTATGTTAAGAATATGTAACAAGGAAAGAAATATACTTTTATAATTATAAAAAAGGAAAAAATAAAACAAAACAGTATATGTAAATTAATTATATCATATGAATTTATCGTAGAAATAAAACGCCTATAAAACATAAGTTTAATTTAAGAAATTTTCACCATTTTAAAATTAAAATTCCAATATTTACGAGTGGAGTAGTTGAGGGTTTGAGAGAATATAGTATACGAAAGGAATGAAAAGCTTAAGCAAGTAGTTAGGGTTTTGTACGCCATCTTGGATCATGCAATATGTTCCTTCCATCATCACCAACTCATCTATATCTTTCAATTCACCTTTCTTTCCTCATTTCTCGTTTCTCTTCCTTAACTAAACACAACACAGAACAACTATTTCATTGCAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATATATCATTCACCCTCTGCAGTTCACCTACCATAGTAACAGACACGCTCCAATTTATATATATATAAAAAGATATTGTTATCAAATAAACAAGGAAAGTACCAGGTGTGTGCTTTCAATGTTGTCTGCATCTTCCTTTTCTTCCTAGCCATCATCATTTGCACAAGGAACTTTGCTTCTGCTCTTGGTTTGCTGAGATGGATATATGATTCAAATTTGTGGCATGACAGTGCAGTTAACTGTTGCTATCAACTAAGTGTGTATGGATATCAGTTTTTGTTTCAATTTTTCTCTTAGCTTTTCTTGTTTTTAGTCAAAGGATCAAGTAACATACATAGTCACTTTGCTTTTGAGAACTAAAACAAGAAGTTTTACTATCATCATCTAGGTTTATATATCTCATTCATTTTCCATTTATATGTGGTATCTGCGTGGATGCATGTGGCTATATATAAGCATATATCGAGTGACGTACTTGAAGGGAACAAATCATAACCATAAAATTAAAATGAATGATTAAATCATCTTGACCGTGATGTAATGTTGTAAAACTAAGATTAACTTTCTCAACTCCTGTGATGTTCTGACATAGATATGCATTTTACATATATATCACATTATCATATAATTAACACATGTTTATTTTTTTTATCTGTACGAGAATATAGTACATAAGACACAAGTCAATTCGATATCTGACAAACACTCTTGATTGGTTTGTACCTCGGTTGTGTCGGCTAGCCAGAGGTGTTCTGAGAATCGGTTGGCACTGATTGAAGAAGGTGACA


Gene Sequence:
>Vu_31410(+)
ATGAACATCATCATGCAAAACTTGGTGGAAAGACTAAGATCCCTTGTGGGTTTGAACGGATGGGATTACTGTATCTACTGGAAATTGAGTGAAGACGAAAGGTTACACATGATTATCTGATTATTCTTCTTTTCTCTTTCTCTTGTCGCGTTCCATTATAATGCTTGCTATAGGTTTCTGGAGTGGTTGGGTTGCTGTTGTGGTGGCACCGAAAGCAACAAAAATGGTGGTGAAGAACATCTTTTCCCTGTGTCTTCTGTGGTTTCATGCAGGGATACCACTTATCCACACCCCAGAACAAAGCCCTGTGATCTTCTTTCCCAACTTTCCACTTCCATACCCATAGATAATTCTGGGTCTGTATATTTTCTAGTTATAAGATTCCAATACTCCCCTTCCCTTTATCTATGGTGTTCTGTATTCTTACCCCGTATACAACAATCAACAGGATTTATACACAGACCCTATTAACAAACCAACCCAGTTGGGTGAACTATTCCAATAGCTTGGATTCAAGCATTTTGGATGTAAGTCAATTTTTTTATTTATTTTCATTTCATTTGTGGAATGCCAAAGGAGTTTACTTTTTCCATCTAAATTCATACATATTGAGTTTGTATGTATATGGTAATTTAATTTGCAGGAAACAATGGGGACCCAGGTTTTGATTTCAGCGCCAGGTGGACTAATTGAGCTGTTTGTAACCAAACAAGTACTGTCATATCATATAACATATAACTTATGTGTTCTTGTAGGTAGCATTCATAGAATGTATAAATAGATTAATTTTCTCCTCTCTATATATATGTGTGTGGGTGTAAAAGGTGGCCGAAGATCATCAAGTAATAGATTTTGTCAAAAGCCAGTGCATTGAAGCTGTGAACCACTCAATGAGCTTCAACATTGACGTGAATTCAATGAGCAACATGCAACAAAACCCACTTTTAGGCGATGAAAACGAAGGGAACAACAGCAGGAACACTCATTTCCACCCTTCGGATGTGATGACCATGGACCACCGCATCGGGCTGTGCAGTTCTCCACTGAACTTCATGCAGCAGTTCAACTACAATCAGCTGAACAGAATGAAGAGCGATGCCTTTTCTGAAGAATACCAAGGTTCCTTCTTTCATGACAAGCAAACAAACCCCGAAGACGAGCATGACAACACGTATCAGAAAAGCCTCATGACGACAGATTCACAGTACATGGAGTCTCTGGAAGCAAAAGAGAAGCAAGAGGAGGACAAGGAGTTGCTGAAACATGTTGTTGCTCGATCGGATTCAATGTCAGATTGCAGTGAGCAGAACGAAGAAGAGGAAGATGGAAAGTATAGGAGGAGGAATGGGAAAGGGAATCAATCCAAGAACCTGATGGCCGAGAGGAAGAGAAGGAAGAAGCTGAATGACAGGTTATACAAGCTTCGTTCTTTGGTTCCACGGATCTCAAAGTTGGACAGGGCCTCAATCCTCGGAGATGCTATTGAATACGTAAAGGATTTGCAGAAGCAAGTGAAGGAGCTGCAAGATGAGCTTGAGGAGAATGCAGACACCGAAAGCAACTGCATCAATGGAAATAATGACAACAATAATAATCAATATGTGGGTGTAGGTGAACTATGTCCAAACTCTGAACCTATTAAGGGCCAATCTGGGTTGCATGTGGGTACCTCAGGGAATGGCTATGTATACAAACAAAAGGAGGATGCAGCATTGATTGAGAAGCAAACCCAGCAAATGGAGGTACGTACCTGTATATACTACAAAAGCCCACTTCAATAGTATGCATAAGATCATTACTTTATATATATTATCATGTTATAGTTTAGAGTTTTGGATATATAATTGTAAGATTTTGGTACATTGCAGCCGCAGGTGGAAGTGGCTCTGATAGATGGGAATGAGTATTTTGTGAAGGTATTCTGTGAACACAGGCCTGGTGGGTTTGTGAAATTGATGGAGTCGTTGAACACTATTGGCATGGACGTGGTGCATGCCACGGTAACCAGCCACAAGGGTCTGGTGTCAAATGTTTTTGAAGTCGAGGTAACTTAACATGTTTTCTTGTATCATGTTGACCAGAAAAAAAAAACATGGTAATTATTCTGTTTTTGAATGTTGAACAGAAAAAAGACAATGAAACTGTCGAAGCCGAAGATGTAAGAGAGTCGCTGCTGGAGCTGACGCGGAACCGTTACAGAGGATGGAGTCATGAGGTGACACCTACGTCGGAAAATGCTGTCGGAAGGGATCAACACCAGATACCATCCTTTTCCCACCATTTTCATACTTAG