Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31401 LG8 47232565 47235763 PREDICTED: uncharacterized protein LOC108325332
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/A 47232579 synonymous_variant p.Leu306Leu
C/T 47232665 missense_variant p.Cys277Tyr
T/C 47233061 downstream_gene_variant
T/G 47233426 downstream_gene_variant
G/C 47233435 downstream_gene_variant
C/T 47233636 downstream_gene_variant
A/G 47233725 downstream_gene_variant
A/C 47233822 downstream_gene_variant
G/A 47233827 downstream_gene_variant
C/T,* 47234208 splice_region_variant&intron_variant
G/T 47234209 splice_region_variant&intron_variant
C/G 47234244 missense_variant p.Val204Leu
G/A 47234293 synonymous_variant p.Pro187Pro
A/C 47234483 intron_variant
A/T 47234485 intron_variant
G/A 47234487 intron_variant
A/C 47234505 intron_variant
A/G 47234507 intron_variant
C/G 47234931 intron_variant
A/G 47234943 intron_variant
G/T 47235090 intron_variant
T/G 47235108 intron_variant
T/A 47235278 intron_variant
C/T 47235285 intron_variant
A/C 47235558 intron_variant
G/T 47235590 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31401.1
MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTHSQHRNQSFEEHDDGCVDEVNDVCVEYSCSKPMGIESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVPNPYCFYDYLQKPMAEHKGIKEFCKASTWQTQPHSSLLLPHFPTLTSFQCPNQQSDFLQVTTLNEGKSSGKGINVDVNTETGEAEVEDVGGYELSLSLTLPNPSPQRSNCSCSGSEISETISSCPAAGFSNYKDCTSSSNLNETINLDLSLALCGN*


CDS Sequence:
>Vu_31401.1
ATGGGTAGTTGTGGAAGAGAAGGAGCTGTCAGGCAATATATAAGGTCAAAGGTTCCTCGTTTAAGGTGGACTCCCGAGCTGCACCGTTGCTTTGTTCACGCCATTGATAGCCTTGGAGGTCATCAAAAGGCTACTCCTAAGCTCGTTCTTCAGTTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGTCATCTTCAGATGTACAGAAGCATGAGGGGCGACTTGGGGAGACAAGGTAGGACACACTCCCAACATAGGAACCAATCTTTTGAGGAGCACGATGATGGGTGTGTTGATGAAGTGAATGATGTTTGCGTTGAGTATTCATGTTCGAAACCCATGGGAATAGAATCTGATTCCTTCTTCGGCCACAGCAATCTCCCTCCGAAAAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGTCTGCAATGCAGCCAAAGATTATGTGATGCAGTTCCAAATCCGTACTGTTTTTATGATTATCTGCAGAAGCCCATGGCTGAGCACAAGGGAATAAAGGAGTTCTGTAAGGCTTCAACATGGCAGACACAACCCCATTCCTCTCTGTTACTACCACATTTTCCCACCCTCACTTCATTCCAATGTCCTAACCAACAATCAGATTTCCTCCAGGTGACAACATTAAATGAAGGAAAGAGCAGTGGAAAAGGAATTAATGTAGATGTGAACACTGAGACAGGTGAGGCAGAAGTTGAGGATGTAGGAGGGTATGAATTGTCATTGTCGCTTACATTGCCAAATCCTTCACCTCAGAGAAGTAATTGTTCATGTTCAGGCAGTGAGATCAGTGAGACAATCTCATCATGCCCTGCTGCAGGGTTTAGCAACTACAAGGACTGCACCAGTTCATCCAATCTCAATGAAACAATTAATTTGGACCTTTCTTTAGCCCTATGTGGCAATTGA


Promoter Sequence:
>Vu_31401::LG8:47235763-47237763(-)
CAATCCGTAGTTAAAAATTAATTTATTTCTCTAAAATTTATAATATTTATTCTAAATAAACACGAATTCATTGTTACACTCTAATATTATTTTTTCATAAGTAATTGAGTTGAAAAAAAATATTTGTTTCGGGAATTCTCGCTCTAAGAAAATAGCCGTAAAGATGAAATAAATTGTGAGAATACTGTAATATTTAATAAGTTTTATAAGTAAAGAGAACAAAGTTGTAAATGAATTATTATAATATTATTGCAAATGATAGAATATAAATATTGAGAATATATAGTAAAGAGAGTTGATTGATTGATTTTGATGGCACATCCCAGCGGTGTAGATTGACAATAGTTCAGAGTTGAAATTCCACATACGGAATTCATCACGTTGACGTAAAGATCCTTCCAACGATCCCAGCCGTTGATTTACGATGGGGTAATTTCGAGGTGCCACCATCTGATTTATTTTGGTGTCTATTGGGATGACAAATTTCGTACGCATCCCATCAGTGTGCTGCTTTGGCTATTTTTTGTAATTATTTTCTTTTATCTTATCTTTCTCATCTTCCACTCTCACCTTAATCACTTCCTAAATCTTAATCCTTCTGCATCTGTCTTTCTTTGACTTCCTTTTTTTTCTTTTATTTTTTTCTTGACATGAAAGATATATTCCCTACGACCTTAACAGAAATGTCTAGTCAATAATTCATAAGTCCATCTTCAATTTTGTTCAGATATTCTTCATAATTTTCTATATTTTTTTTTAAAAATTATTTTTTTATTTCTTTTCCATCCCAACCATGTGGAGCTTAAAACAAAGACATATTAACATATTCAGCTCCAAAAAGTACATGTAAAAAGCTCTCATGCAGTTGTTTAGAGTTTGAAACAAGATGGATAAATAGTAAAGTTAACAATTTCATGACAGAAACGAAAAAGATCGAAAGTAGAAAAAATATGAAAAAAGTGTGGTAATAATAATATTATTATGTGTACTATTTCCCATGCACGTCCAAATGGCATTACAGGCAGTTTATTGCTTGGCACACAGGTAACCTAAGTTTAGATTAGGGCTAGAAAGAGTGTGGGCCCCAGAGAAAGGGTAGAATGGTCTGCGAAAGATTGCAGTGAGGGCAGATCTGTGAAATTGTGTTGTGCAATAATGATCTTGCATTCACACAATGTTCATTCACAGAAAGGATAGTATAATAGGTATAATAGTAATAATAATAACTAGAAAGAAGAAAAGTATTTTCATGGGGTCTTACACAGTGATGATGACGACGTTGGCGTATGTAGCAGTGGTCATATTCTAATGAGTAAGTCTTTGTAGAGAGAGAAGGAAAAAGTGGCGTGAGAGAGAGAGAGAGAAGCAAAGGTCAAAGCGAGGCAGTTGAGTAATTGTAACACCGTTGATAGTACCCATTATATTGGCAATTGCATAGGTGTAATGATTTCGTGGAAGGTCAGTGCAAACAAGATCAGAAGCCTCCTCGTGATTTTTATCTGAGAAAAAGCGTTTTGAGTTTTCTGCTTTTTGGGGATTTCAGTTTTGAGTTTGTAGTAGTTTCTGTTCCCTTTATTTATTTTCTAGTTTATCTGATTGCTCCTTGGCAACTTAAAGGTACAGCAACCACCGTATATATCAGGTATTATCAGTGTATGTGTGTGTGACTCCTAAGGAATTTGCAGAGCTCTTACACATGTCTTCTTCGTCTTTTCATTTTCTCTCGTGATATTCCTCCTCTCTCTCTCTTTTGCCCCCTCTGCTTTCTGTTTGCGTGGGGAGCAAAAAGCTCATTCTTTTCTCTCTCTCTCTCTCTTTCTGATATATAAGACTGAGAGGTCCAAACAAACTAAACTTCTTGTGGGCAAGACGTAGGACCTTTTGGTGTTGAGGAAGAAACACAAGAAAGCGAAGAAAGCGAAGGTCTTTTTTACTCAACCAAGGGTTTCGATATATATCTATCTATCTATCTGCTTTGCATATATAAGATCAAACTGAAC


Gene Sequence:
>Vu_31401(-)
ATGGGTAGTTGTGGAAGAGAAGGAGCTGTCAGGCAATATATAAGGTCAAAGGTTCCTCGTTTAAGGTGGACTCCCGAGCTGCACCGTTGCTTTGTTCACGCCATTGATAGCCTTGGAGGTCATCAAAGTAAGTCGACTCGTTTTTCATTTTTGGATATTTAAGATATAGGATCCGTTTTTCCTGGCTATTATTAATTTCTGTTTTTTTTTTTTTGTTATCTTTTCAGAGGCTACTCCTAAGCTCGTTCTTCAGTTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGTCATCTTCAGGTTAGGAACGTTAGAACAACACGGTTTTTATGACCAGTCAAAATTTTGCTGATGCATGGTTATGTTTCATTTTCGGTGTTGTTTATTGATGTCGGGTTTCTCTCTTTACACAAACCAGATGTACAGAAGCATGAGGGGCGACTTGGGGAGACAAGGTACCGAACCCTCTTTACTGCAAAACACACGAACAATGATAGGGTCTTAATCTTTGTAGTTGTTCCTCATGACGATCGTGGTTCCTCAAGAGTATATTTCTGTCACGTATCCATGCCATACGTGGGGAACTATAGACCATGCTCTGTGCATTGAATGCTGATTGTTGTTTCTTCTCTCGGTACATATTTGAAGTTAAAAAACACATCCTATGAGCTCGCACTTATACACAAGTTGGGAAACTTGAAACTGAGTTGCACATTTATTAGTCTCTTCTTTACCATAACAGTGTAGGGAGAAGAAGGAGGCAATGTCCTTTTAAATCTTCCTCTAATGGCATTTTGATGAAATCCACAACTTTTTTTTTTCTGCATTGTTCATACACAACAAAGGTCGTTCGTTGCCGGCATGTGTTGAAAGCACAAGGCATTAATTGCTAACATGAAAGAAATGTTATGATTATTTTATAATGTGTTGGTAAGTGGGTACGTGTATTTGTCAGGTAGGACACACTCCCAACATAGGAACCAATCTTTTGAGGAGCACGATGATGGGTGTGTTGATGAAGTGAATGATGTTTGCGTTGAGTATTCATGTTCGAAACCCATGGGAATAGAATCTGATTCCTTCTTCGGCCACAGCAATCTCCCTCCGAAAAGGTCAGCCTATATAGCTTTATTCATCTCTTTTCTCAGCTGAAATAATTTCAGACTTTTCAAACGTCAAAAGAAAAGAGAAGCAAAAGAGAGCGGTGTTACGCTTGCCTTGATCTTTTGCTTTTCTGAGCCAACTTTTACTTTTTTGCTTCTTTTTAAATTCCTTTTCGTTTGGATTCTCTACTCAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGTCTGCAATGCAGCCAAAGATTATGTGATGCAGTTCCAAATCCGTACTGTTTTTATGATTATCTGCAGAAGCCCATGGCTGAGCACAAGGGAATAAAGGAGTTCTGTAAGGCTTCAACATGGCAGACACAACCCCATTCCTCTCTGTTACTACCACATTTTCCCACCCTCACTTCATTCCAATGTCCTAACCAACAATCAGATTTCCTCCAGGTCTCTCGTCTCTTCTTTTTCTGTTATGCTTTTAATTTATTATTTTAGGGTTTTTGCACTGTGGTTAATTGGAGTTTTACTTCCATAATACACATAATTATAGTCTGCATTAAATGCCGATATTCACTGTAAAGTATAATAAATAGCTGTGAAACTTAAAAGAATGCAAAAAAGTTTTATTCCTTGGAGGGATGCCGAGATGACCAATCCATAGGGTGGAAGCACTCCACTTTTGTTCAGTGTGATCTTACGTTTTGTCTGTCAAATGTGCACAGCTTTTGGGATCACGTTGTGTGTTAAATGGGAAACCGTTGGTTAATTTCTCAGCTGCCTGTGCCTCTTCTTTCTCTATCTTTTATAGAAAAATATATTATTAAACTATTATTAACTTTGTTCTGAGGTTCAAACAGGAAGCTCTTTTGTAGAAACTGGTGTCATTATTAAATAGTTTGGGTTGGAATGATTTCTTTGGGTGAAGCGATGTTAAAAGTGTTGCTTAGTATTATTAGTTTTGATATTGTTGTAAAGAAGTTGGTTTTTTGAAAAGAACAGCAGTTAAGTGTTGCAAAATGAAGAGTGGCTAAAATAAGGAAACGTGAAGTGTTGAACACAGGTAGACACATTACTTTATGTAACATTTAATCTGGTTGTGGAGTGGTTAGATTGTTTTGGTCCCCTTTTGTACGACTTGAGATTGTGGTGGGAATAGAGGAGAGGGTGCTTGTGATTGTCCAAAATTTATCATAGGCTGAAATGTGGCCGAAAGGGTCATCATGGCTTCTAATTTATATTCTGAGTTTTTTCACATTCAGTGGTCCTCCCAAATTATTGAAATTCTGACTTTGCAAATGGAAATTTATCTATGCCCTTTATTGCATCCATACGGATACTTCTTTTGAAGGTAGAGACCCCACAAGTAGGACTTAACCTCAACTTCTTTCCTCTCCATAAAATCCAAAACTTATAATTGCTCTCTCTGGATCAGAAGAAAGATAAAGACGTCAATGTATCTATTTTTGTTTGATTATACAAAATAAAAAATTCTTCTTTACGTTTTCAGTCAATTCAAATTTTAAAACTTTTCCAACACCATGTTTCTCTCTCCTTCCTTTCTTCAAACTTTCTTCTCATCTGCACAAGTCCACATAACATTTAGTCAAAAAATGCATGTGGGGGTGTGATTAGGAACATGATTTTCAAAAAGTATATTTGTTGTTGTTTTGAGTGTGTGTGTGTTGTGTGTATATATATATGTCTTAGGAATAGTGGTCAAATGAATAGGAAGGAAGAGTGTTGTTACTTTGCAGAAGTGAGATTTTTGAGACACTGTTGGTAATGTGTTTTGTGGTGTTTATAGGTGACAACATTAAATGAAGGAAAGAGCAGTGGAAAAGGAATTAATGTAGATGTGAACACTGAGACAGGTGAGGCAGAAGTTGAGGATGTAGGAGGGTATGAATTGTCATTGTCGCTTACATTGCCAAATCCTTCACCTCAGAGAAGTAATTGTTCATGTTCAGGCAGTGAGATCAGTGAGACAATCTCATCATGCCCTGCTGCAGGGTTTAGCAACTACAAGGACTGCACCAGTTCATCCAATCTCAATGAAACAATTAATTTGGACCTTTCTTTAGCCCTATGTGGCAATTGA