Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31342 LG8 46657619 46660036 PREDICTED: ethylene-responsive transcription factor ERF118
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/C 46657683 3_prime_UTR_variant
C/T 46657695 3_prime_UTR_variant
G/A,* 46657730 3_prime_UTR_variant
A/T 46657738 3_prime_UTR_variant
C/T,* 46657804 3_prime_UTR_variant
G/C,* 46657823 3_prime_UTR_variant
A/T 46657882 3_prime_UTR_variant
C/T 46657923 3_prime_UTR_variant
G/A 46657959 synonymous_variant p.Thr342Thr
T/C 46658041 missense_variant p.Tyr315Cys
C/T 46658196 synonymous_variant p.Leu263Leu
G/T 46658270 missense_variant p.His239Asn
C/A 46658478 synonymous_variant p.Ala169Ala
A/G 46658557 missense_variant p.Ile143Thr
A/T 46658565 missense_variant p.Ser140Arg
C/A 46658647 missense_variant p.Arg113Met
T/C 46658649 synonymous_variant p.Arg112Arg
A/T 46658671 stop_gained p.Leu105*
G/A 46658703 synonymous_variant p.Ile94Ile
G/T 46658770 missense_variant p.Thr72Asn
A/G 46658798 missense_variant p.Ser63Pro
C/G 46658829 synonymous_variant p.Ser52Ser
T/C 46658847 synonymous_variant p.Ser46Ser
G/T 46658883 missense_variant p.Asn34Lys
T/*,A 46658913 missense_variant p.Lys24Asn
G/T 46658959 missense_variant p.Thr9Asn
T/A 46658964 missense_variant p.Gln7His
T/C 46658976 synonymous_variant p.Glu3Glu
G/A 46658981 missense_variant p.Pro2Ser
A/T 46659055 5_prime_UTR_variant
C/T 46659144 5_prime_UTR_variant
C/T 46659183 5_prime_UTR_variant
G/A 46659186 splice_region_variant
T/A 46659197 intron_variant
A/G 46659210 intron_variant
G/T 46659280 5_prime_UTR_variant
C/A 46659359 5_prime_UTR_variant
T/G 46659364 5_prime_UTR_variant
G/C,* 46659431 5_prime_UTR_premature_start_codon_gain_variant
C/T,* 46659441 5_prime_UTR_variant
T/C 46659507 splice_region_variant
T/A 46659561 intron_variant
C/G 46659588 intron_variant
C/A 46659604 intron_variant
A/T 46659660 intron_variant
G/A 46659722 intron_variant
A/C 46659743 intron_variant
T/A 46659961 5_prime_UTR_variant
C/G 46659969 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31342.1
MPESRKQLTFKPRQKPHHSVQESKAMRKLRIIYNDPDATDSSDDESEVFQKSKKAKRNFCEISLPPLPQTFTTPETNSFEVNSNSNAVRVKVCIEGQPQTKKRVLTQTPSTRRNTSGKYRGVRQRKWGKWAAEIRDPFQSTRIWLGTFNTAEEASQAYEARRLEFEAKAKARAYKIVSEPLSTTSDKSICCNSSDAAAVSVSEKFSTTTDDSDGVLSHPSPSSVLELDSSSSKPIDNDHVLSEEAVETNNLVSEFAELEIPDLSLLNLPSPFIGATAGLASGTEPDFGIDFDWLSLEDYGQGFDDFGGLEDIRIYGFDNNEPSKLPDFDFGDFCAEEFAGWTEEPLNIPCA*


CDS Sequence:
>Vu_31342.1
ATGCCTGAATCTCGGAAACAACTGACTTTTAAACCGAGGCAGAAACCTCACCACTCCGTGCAAGAGTCCAAAGCAATGAGAAAACTACGAATAATTTATAACGATCCTGATGCCACTGATTCATCCGATGATGAGTCAGAGGTGTTTCAGAAATCGAAAAAAGCAAAGAGAAACTTTTGTGAGATCTCTCTCCCACCTCTTCCTCAAACTTTCACCACTCCTGAAACCAATTCCTTTGAGGTGAATAGCAACAGCAATGCAGTGAGGGTGAAGGTTTGCATCGAAGGTCAACCCCAGACAAAAAAGAGGGTTTTGACCCAAACCCCATCAACAAGAAGGAACACTTCTGGGAAATATAGAGGTGTTAGGCAGAGAAAATGGGGTAAATGGGCTGCTGAGATTCGTGATCCTTTTCAGAGTACTCGCATATGGCTTGGTACTTTCAACACAGCGGAAGAGGCTTCTCAAGCCTACGAAGCCAGAAGGCTTGAGTTTGAAGCCAAGGCGAAGGCCAGAGCCTACAAAATTGTTTCAGAGCCTTTGTCCACAACTTCTGATAAGAGCATATGCTGTAACTCTTCTGATGCTGCTGCTGTGTCTGTGTCTGAGAAGTTTTCTACTACCACTGATGACTCAGACGGTGTGTTGTCACATCCATCACCTTCTTCTGTGCTTGAGTTGGATTCTTCATCTTCCAAACCCATTGACAATGACCATGTTTTGAGTGAGGAAGCTGTTGAGACTAATAATTTGGTTTCTGAATTTGCTGAACTTGAAATTCCAGATTTGAGTCTTTTGAACTTGCCGTCACCATTCATCGGTGCTACTGCTGGTCTTGCATCTGGTACTGAACCAGACTTTGGTATTGATTTTGATTGGCTATCACTTGAGGATTATGGTCAGGGTTTTGATGATTTTGGTGGCTTGGAAGATATTCGCATTTATGGGTTTGATAATAATGAGCCTAGTAAACTTCCTGATTTTGATTTTGGCGATTTCTGTGCTGAAGAGTTTGCAGGTTGGACCGAGGAGCCCCTCAACATACCTTGTGCCTAA


Promoter Sequence:
>Vu_31342::LG8:46660036-46662036(-)
ATTCTGGGAATTAAAATTTATTCTTCTCCTTCTCAAATTTTATAAGGTAAAATCTATTTATAATATGACATAAAAACACACAATTAGCAAAATAAAAAAATAAATTTAATATTTCAATTTTCAATAATAAACGTAATCACCCGTTATTTGTTTATAAAATGATACAAAATTTTGAAATTTAGATGTAATCAAAATATAAAATAAGATTTCCTTTTTTTTGGAAAGGACATATAGTATTTCTAAATCATTAAAAACATCAATATGAGTTCATTATCTGACAAACAAGAAATATTAAATAAATTACTTTATAAAAAAATATAAATATAGTATATTTTTCTTTCTTGTCTTATTGTTATTTTTTTCCCCACTTTTTAACATAATTATCATCTCAAGCATTTATTTATTTTTCAACTTTATTAAAATAAAGTAATATCCTAAATTAATATAATTGATACACTATAAAACACATTAAAATATACTATCTTTCTAAATTGATATACACTGATATTAATACATATTTTACAAAAGTAAGTTTATATTGGGGAAAGTTTTTATTCTACACTTTATTTCGTTTATCATAAAAGATATGAGATATCAGTGTATATGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTCATGCATTTATAATATTAAGTATTTTTAACTTATATTAATTCAGAATATATTGATATAATATAATTTTAAAATTGGTTTCTGCTCAAGGATTAGGTTAATTTCATCAATATGAATGAAAAATACACATATTAGTAATTTGTACATTATTTAAAGAGACAGATAATTTAATATTTTGTTGATATCTTTTTTAATTATATAATTTTATATTTTAATGAGTAAAATAATTTTTTTTGTAATAAAATATAATCTCTCTTTATTTTAAAATAATTAATAAATTTATATTTTTAATATAATTGTTGCATATATACTTTTTAAATTATATTATTATATTTTTTTACTAATTTCATGTAAAAATAATAAAATTATATATTCTATAAATTATAATATTTTAATATATTAAAAGTGTAAATATTCATGGACATGATACACCAAAACAGAACAGAAAAGACATGCCATAAAAAAGTTATAATACTCTGATTCATTCTTAAATCTTATTGTTTCTAAACTATAATGGTAAAAAATATACCTTAAAAATTGTTTTTATAAAATAATATACAGAAAAATCTTTTGTTCATATCAATAATATATGAACAATTAAATCACTACAATAAGATAAACATATCTTCTATAAATAGTGTATGGAAAATAAATTATGTTTGTTTTCTCTATACAAAAATTGATTCGGAAAAGTAAAAAGTATGTTGAAAAAATCAAACAAATTTTGAAAAGAATACAGTATTACAGTAAAATACACCCACTTTATTACTTTGTTTTTGTTCTCTTTTACTTTTTTTTTCCTTTAAATTTAAATCAAATATAATTTATTAGTGTATTCGACTGCCACAAAAGAAGGTCCCAAGATTAGCATTTTCCCGTAAATATAATGAATCTGTTAATATTTTGTAGGCAACTGAAGCGTTCTTTTGGTTAGTCATCCTTGACGGCGTAAAAAGCTGCATGTCAGAGATGATCTTATTCTAGTTGCTCATCTAAGCGCGTGGAATTCACCTTAGGTGAGATTTCGTAACCGAGTCATCTGAATGTTGTTAGATTCACGCGTGGGGAAAGCAGAAAGATCGGATTCCAAGGAAGAATCTGAAGACGTTAGACTATAGAGCATGATATACATGTAGCATGTTGATGGGTCATGCATGGTTAATGTATGCTTAGTGTTTCACACTCACACAGCCCCATGCCAGCTAGACATAATAATGGAAATAAATATAATGTTTTCGCGGAATTAATATTTATATGTTTTACCTACTCGGGCCCATTAAATGCGAATTTTTGACCGGCGATAAAAAAAATGGGTGAAGGGTGTGTTGTGCAG


Gene Sequence:
>Vu_31342(-)
AATAGAAAAAGAGCATAGAGGGGCCACTCTTTGTGAGAGAAACCACTGCCAATAGCAGACACAGACAGACACAAGAGAGAGACAGAGGGAAAGACAGACTAGCTTCCTCCTTCTCACCCAAAACAAACAAGGTAAATTTCATTGTAGACTGTGTTCTTTCAATCTTCTCCGTTCATTTTTTTTTTTTCTTCGCCTCGAGACTCCCATCGGATTAAAACACCATTATTATTTATTATTATGTAATGTCTTTTTCTCTCTCCTTTAAAAAAATTCTCACTCTGCTGCTCATGTTGTATGGAGATTTGCACTCACTGCGTCCTTTGTCGTACCAAGGTCGACTATTTTATATAAATATATTTCTCAGATCGATAGAAACTCTCTATTAAAAATCTGGTCCATAATCTTTCCCTTTCTCTTTTTAATCTCCGCACTGAACCATACTAGTTTGGTTTTGGTTTGTGTTTTTGTTACATATAAATCTCTTTTCTATTGGACCGGTGAAGAGAGTTTTATTTCTGCGTTTTTAGGAAGATCTGTCTTCGAAAAAAGGGCAGGCAAGCTGTGGATTTATGTCGTCTGGATTTATTCTGGCAGTGATTGGGGCTCCGTTGAAGCTCTCTAAAATTTGTGTTTCTTTCTCTCTCTTTTCAATTTTATCTGAGATTGTGTTCTATTTTGTCTCCTGGTCTTGGTGTATGCTAAGCTGCGTACTCTGTGATAATATCGTGAAGCCATCTGTTTCAATGCGATTGAGATCAAAAAGGTTTGTTTGTTTGGAGTGGATTTCATTTGTTTTTCTAAGTTTTGTTATGTGATAATGGTCTGATTCTTTTATGGTTATGGAACAGGACTTGTTGCGGAGTGGAGTGTTACGGCTGCTTTCACATACAGAGATTTTCTTATCTTTTCATAGATTTAACTTGAGATCAGAGTTTTGATTACCTCTCTTTTCTTTGATTTTCTTCTTTCTCTCCGTTCATTTCGGTTTTCTTCTTCTACATATTCTGAGGCTGAGGGTTTTTAGAGGGTTTTTCCTCATTTTTTTTCTCACCATGCCTGAATCTCGGAAACAACTGACTTTTAAACCGAGGCAGAAACCTCACCACTCCGTGCAAGAGTCCAAAGCAATGAGAAAACTACGAATAATTTATAACGATCCTGATGCCACTGATTCATCCGATGATGAGTCAGAGGTGTTTCAGAAATCGAAAAAAGCAAAGAGAAACTTTTGTGAGATCTCTCTCCCACCTCTTCCTCAAACTTTCACCACTCCTGAAACCAATTCCTTTGAGGTGAATAGCAACAGCAATGCAGTGAGGGTGAAGGTTTGCATCGAAGGTCAACCCCAGACAAAAAAGAGGGTTTTGACCCAAACCCCATCAACAAGAAGGAACACTTCTGGGAAATATAGAGGTGTTAGGCAGAGAAAATGGGGTAAATGGGCTGCTGAGATTCGTGATCCTTTTCAGAGTACTCGCATATGGCTTGGTACTTTCAACACAGCGGAAGAGGCTTCTCAAGCCTACGAAGCCAGAAGGCTTGAGTTTGAAGCCAAGGCGAAGGCCAGAGCCTACAAAATTGTTTCAGAGCCTTTGTCCACAACTTCTGATAAGAGCATATGCTGTAACTCTTCTGATGCTGCTGCTGTGTCTGTGTCTGAGAAGTTTTCTACTACCACTGATGACTCAGACGGTGTGTTGTCACATCCATCACCTTCTTCTGTGCTTGAGTTGGATTCTTCATCTTCCAAACCCATTGACAATGACCATGTTTTGAGTGAGGAAGCTGTTGAGACTAATAATTTGGTTTCTGAATTTGCTGAACTTGAAATTCCAGATTTGAGTCTTTTGAACTTGCCGTCACCATTCATCGGTGCTACTGCTGGTCTTGCATCTGGTACTGAACCAGACTTTGGTATTGATTTTGATTGGCTATCACTTGAGGATTATGGTCAGGGTTTTGATGATTTTGGTGGCTTGGAAGATATTCGCATTTATGGGTTTGATAATAATGAGCCTAGTAAACTTCCTGATTTTGATTTTGGCGATTTCTGTGCTGAAGAGTTTGCAGGTTGGACCGAGGAGCCCCTCAACATACCTTGTGCCTAAGTTTTGCAGAAGTTATAGGAATAATTTTACAATATTTATTATAAGTTTTGTTAGTTTTGGTGAGATCTTAGAAATTGTATAGGATCAATTTCTGAGTGCATATCCCTTATATTTATTTGTTTGAGGAAGAAGTTATGAGTAGAGTTAGTCTTTTAGTCTACTAAGTTCGAGAGATAATCTTTGGGTTTTCTTGTGCTGCTAAGAGCCGTCCAAAGATCTGAAATTTCAAAGTTGAAATTTTTCCTTTCCGCCGAAGTAATTATTAATTTTATGTAAAAGTGGTAGTTATATATATATTTATTATAAATTT