Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31314 LG8 46308409 46311938 PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 46308409 start_lost p.Met1?
C/G,T 46308414 missense_variant p.Asp2Glu
A/G 46308423 synonymous_variant p.Lys5Lys
G/T 46308445 stop_gained p.Gly13*
G/C 46308471 synonymous_variant p.Thr21Thr
G/A 46308508 downstream_gene_variant
T/C 46308509 downstream_gene_variant
T/G 46308594 downstream_gene_variant
C/A 46308601 downstream_gene_variant
T/C 46308608 downstream_gene_variant
G/C 46308622 downstream_gene_variant
T/C 46308631 downstream_gene_variant
A/C 46308634 downstream_gene_variant
C/A 46308647 downstream_gene_variant
G/A 46308662 downstream_gene_variant
G/A,* 46308738 downstream_gene_variant
A/T 46308739 downstream_gene_variant
T/C 46308757 downstream_gene_variant
G/T 46308774 downstream_gene_variant
G/T 46308798 downstream_gene_variant
T/C 46308833 downstream_gene_variant
T/C 46308864 downstream_gene_variant
A/G 46308869 downstream_gene_variant
G/C 46308872 downstream_gene_variant
C/T 46308881 downstream_gene_variant
G/A 46308886 downstream_gene_variant
A/T 46308890 downstream_gene_variant
T/C 46309033 downstream_gene_variant
A/T 46309049 downstream_gene_variant
T/C 46309072 downstream_gene_variant
C/T 46309195 downstream_gene_variant
A/G 46309204 downstream_gene_variant
C/A 46309383 synonymous_variant p.Pro60Pro
A/G,* 46309483 missense_variant p.Asn94Asp
T/C 46309569 synonymous_variant p.Pro122Pro
T/C 46309708 missense_variant p.Tyr169His
A/T 46310403 synonymous_variant p.Ala400Ala
A/G 46310905 downstream_gene_variant
G/T 46311330 missense_variant p.Ser471Ile
G/A 46311336 missense_variant p.Gly473Glu
G/T 46311348 missense_variant p.Arg477Met
T/C 46311350 missense_variant p.Cys478Arg
G/A 46311351 missense_variant p.Cys478Tyr
C/T 46311379 synonymous_variant p.Val487Val
G/A 46311617 missense_variant p.Gly567Ser
G/A 46311630 missense_variant p.Arg571Lys
T/G 46311635 missense_variant p.Cys573Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31314.1
MDGQKKYEEDFDGERTEKKKTLNICRKRSSSNPDFDALVAFKTASDTSQKLTTWNTSSTNPCSWSGVSCIGDRVSRLVLENLDLQGSIHPLTSLTQLRVLSLKGNHFSGPVPDLSNLTALKLLFLSRNAFSGEFPGTVTSLFRLYRLDLSNNNFSGEISATVSHLTHLLTLRLDGNKFSGHIPAFNLPDLQEFNVSGNRLSGEIPKALSSFPESSFGQNPFLCGAPVKKCASDPTKPGSEGAIASPLLPQNHNNPTPTVSSSPSSMPKTSTPTSSSKSHEKGASKISPVALIAIIVGDVLVLAIVSLLLYCYFWRNYKLKEGKGTKLFESEKIVYSSSPYPAQGGFERGRMVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQITGKREFEQHMEVLGRLRHPNVVSLRAYYFAREEKLLVYDYMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSIRLTHGNIKSTNVLLDKQGNAHVSDFGLSVFAGPGPLGGRPNGYRAPEASDGRKQTQKSDVYSFGVLLLEILTGKCPSVVESAGSAYGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAMTCTAAAPDQRPRMSHVVKMIEELRGVEVSPCHDSTDSVSESPSMSEDACGTSQ*


CDS Sequence:
>Vu_31314.1
ATGGACGGGCAAAAAAAATATGAAGAAGATTTTGATGGAGAAAGGACGGAGAAGAAGAAAACGCTCAACATTTGCAGAAAGAGAAGTTCCAGTAACCCAGATTTTGACGCTCTCGTGGCCTTCAAAACCGCTTCAGACACTTCCCAGAAGCTCACAACGTGGAATACCAGCAGCACCAACCCCTGTTCCTGGAGCGGCGTGTCGTGCATTGGCGACCGTGTCTCGCGACTCGTTCTCGAAAACCTCGACCTCCAAGGCTCCATTCATCCCTTGACTTCTCTAACTCAGCTCCGAGTTCTCAGTCTCAAAGGAAACCATTTCTCCGGTCCCGTTCCCGACCTCTCCAACCTCACCGCCCTCAAACTCCTCTTCTTGTCTCGCAACGCCTTCTCCGGCGAGTTTCCAGGCACCGTCACGTCGCTCTTTCGCCTCTACCGACTCGATCTGTCCAACAACAACTTCTCCGGCGAGATTTCGGCGACGGTCTCCCACTTGACCCACCTCCTTACTCTCCGCCTCGACGGAAACAAGTTCTCCGGCCACATTCCTGCCTTCAACCTCCCCGACCTCCAAGAATTCAACGTCTCCGGCAACCGCCTCTCCGGCGAGATACCCAAAGCGTTATCGAGTTTCCCCGAATCATCGTTCGGGCAAAACCCGTTTCTCTGTGGTGCTCCAGTTAAAAAATGCGCATCCGACCCAACCAAACCCGGATCAGAAGGCGCCATTGCTTCGCCGTTGTTACCACAGAACCATAACAACCCAACACCTACGGTATCATCTTCACCAAGCTCAATGCCAAAAACGTCAACACCAACGTCAAGTAGTAAAAGCCACGAGAAGGGTGCTTCTAAAATAAGCCCGGTGGCGCTTATAGCTATTATAGTTGGTGATGTTTTGGTTCTTGCAATAGTGTCTTTGCTTTTGTATTGTTACTTCTGGAGAAACTACAAGTTAAAAGAAGGGAAGGGAACGAAGCTTTTTGAGAGTGAGAAGATTGTGTATTCGTCAAGTCCGTACCCTGCTCAGGGAGGGTTTGAGAGGGGTCGCATGGTGTTCTTCGAGGGTGAGAAAAGGTTTGAACTAGAGGACTTGCTGCGAGCATCTGCGGAAATGCTTGGAAAGGGAGGGTTTGGGACCGCGTACAAGGCAGTGCTCGATGATGGGAACGTGGTTGCGGTGAAGAGACTGAAGGACGCGCAGATTACAGGGAAGAGGGAATTCGAGCAACACATGGAGGTGTTGGGAAGGTTAAGGCATCCAAATGTCGTTAGTTTGAGAGCTTACTATTTTGCGCGCGAGGAGAAGTTGCTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGGAACCGAGGACCCGGACGAACCCCACTGGACTGGACCACGAGGCTGAAAATAGCAGCGGGAGCGGCGAGAGGTGTGGCTTTCATTCATAACTCGTGCAAGTCCATTAGACTCACCCACGGTAACATCAAATCCACCAACGTCTTACTCGACAAGCAGGGCAACGCGCACGTGTCTGATTTTGGGCTCTCGGTTTTCGCGGGGCCAGGCCCATTGGGTGGGAGGCCCAACGGCTATCGCGCGCCGGAAGCATCGGATGGTCGAAAACAGACCCAGAAGTCTGACGTGTACTCTTTCGGTGTGCTCCTACTGGAGATTCTAACTGGGAAGTGCCCTTCCGTGGTGGAGAGTGCAGGTAGTGCTTACGGTGGGGTGGTGGACCTGCCCAGGTGGGTCCAGTCAGTGGTGAGGGAAGAATGGACAGCTGAAGTGTTTGATTTGGAACTGATGAGGTATAAGGATATTGAGGAAGAGATGGTGGGGCTGCTTCAGATTGCGATGACGTGTACCGCAGCTGCACCTGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATTGAGGAGTTGCGTGGGGTCGAGGTGTCGCCGTGTCATGACTCGACGGACTCTGTTTCCGAGTCACCTTCCATGTCTGAAGATGCGTGTGGAACGAGTCAGTGA


Promoter Sequence:
>Vu_31314::LG8:46306409-46308409(+)
TTATTATGAGCTTTAAATGAGGTCGCTCACATTGTATTTAGGAAGTCTATCTTCAATGCTTTAAGTCTTCATTGCTCTATGTACCCAGCGACGAACTCTAGGAGTTCTCTTTGGATCTGTTCCTTAAACTAAACAGAAAATGCTAAGAGATTTTCATTCCAAAAATATTTATAATGAAAAGGCATTGGAACAAAGTTAAGGTCTGAATCTTCCTACACATAATATTTTATAATTTAAAATTAAGAGTCGTTAGAACTACAAGGTTGAACGCTCTGAACCATCCTGTGCATAATATCTTATAATTTAAAATTAAGAGTCCGTAGAACCTGATAAGGTTGAACGCAGTTCTGAAAAATATTTTATAATTTAAAATTAAGAGTTGGTAAAACCTGACAAGGTTGAACGCAGTTCTGAACCATGTGTGCATAATATTTTATAATTTTATTTTATAATTTAAGAGTTGGTAGAACCTGACAAGGTTGAACGGTAAGTTAAACAACTATATTATAATTTTTAAATTGTCAAGGTTGGATGTAGGGTTGAATCTTCCTAAAAGTTCTTAAAACAAAAGACGTGCCTCTAGGAATTATTACGGAATTTTTTACTCTAGTTGCAAAAACTGATGTTGATCCGAAGTAGCGATGTCCAGACCGAGCGCGCGTCTGGTTCTTCATGGCTTATGGGGATGCCGCTCGGCCCCACTGTGGGCGCCAAAATGTTTCGGTTGAATTGGTCCGAGGGTCGGTCGTCCTTCCTTGCTCTGCTCTCTTTTAATCTTCAATCCTCTTCGAGAACACGATCCACTCTCCAGTGGGTTGTTGACCTACATTCCGACATTCAAAAATATATGTTTCATAAAGAGGTCTATATTTTATTGGAATAGAAAAAAATCATTGTATGTGGACATCAGTTGTCTACTTATAAGGGGACCTGGACATCAATTGTCTACTTATAAGACTTCTGACAGTTACGTCCATTGATTAATCCAATATATTTTGGGTAATCAAATCCAATAATTAATCATTAATGTCTTGTATTTGTAGAGCGTAAGACAATTTGACCTATTAAATATAGTTGGTACAGTACACAAAGCATATGAAAGCATAAACATGAATTTTTTTTTTCATGACTTTCTGTGTGTAGTTTTGACATTGTTTGTTATCGGATACTGTCTAGGTCCAAATAACTGAAACGTAATCCATTATATGATTGCGAAACCCTGATTTTTATGTAAATAGATTACATAAAAATATTATCATTCCTACATGATTCATTATGTAAATCATTTAAACATACGATATTTATACACAAAAATTAAAATAAAATCCATGAATATAATAGTCATACATAAAGAAAACTATTTTCTTTTCTATTAAACACAGAACACCTAAATTTCACCATTTTTCCTGCTCTATTTCATTTCAGATAAACAATATCATTTTGACTATTTCTTATATCTCTTTCTCTTATTTTTCAAATTATTTCAAGTATACTAAACACAAATTAAATGGTACGAAACGTGTGAGAACATCTACATCGAAAATTTTAAATAACAATTATTTATAAAAAAGTTATTTAATATAAGTTATACATACATATAAAGGCTTAAATTTAGAGAGAATTATTTAAATAATACTCTTTTCAATTTTAATCGATTGGTTATGTGAACTAAGCACTAGAGTCGTGTTTTAATCAATATGGCATGATAGAGTAAGCTGGTGTCAGACTGATTCTAGTACGGATCACATAGAGGGGGAGAGAGAAAGGTAGCTTCTCACGGATCTCCTCAGTTCTGAACAATTCTTCTAGCAATTAGCAATAAAAAATGAATAATTGAGTATTAGTTCAAAAGATTAAATAAACAAGTGTTTGGCAGCTGAGTCCAAGATCTATCTCTGTCATATTGAGCTTTATTTATAGCATATTTGAACTCCGTTTTTGGTCCTCCACTCTTCATTTCTCGATGCAAAGCTATGCAACATAAAAAGTGAAGTTCCCCA


Gene Sequence:
>Vu_31314(+)
ATGGACGGGCAAAAAAAATATGAAGAAGATTTTGATGGAGAAAGGACGGAGAAGAAGAAAACGCTCAACATTTGCAGAAAGAGAAGTATTTAATGCTTCGTTGAAATGGGACAACACGTGCATGTAAGTCCAAAACCAAAATGTGAAGCCGATTATCATCCATAATACTATAATTCAACTTACTATTGGATCCCAGATTTATCTTCTGCTACTGCTTAATTTTTCAAAATTAAATCAACAAAATATTATAATCGAAGCATATTAGTAAGTAGTATGGTATAATCGCGTATATTAATAACTATACATAAATTTTTGAAAAAAAGTACCTAGAATTATTCTTAGATGTGGTACCGTGAAAAGTGATAGAAACTAAAGTAATAAATTATGAAGTCTCCATCAAACGTATTAGAAAATAATAAAAGATTAGTACCACTACTTACCAATAATAACACAATTCATTATTGGTCATAAACATTTGAGAACAGTAACGACAGAGTGGTCTTTCAGTTGAACGTAACAGCAAAAAGTTGCATATTAGTATAGTCTTTTGAGGCAGAACGATGTGTCAGTATTCCGAAACCACCAAAACCACGAACTGCATTAACACAATACGCTCATTTCAATTAATCCCTCTCTCCATAACAATAACTCCACCCAAATTATTACTCTCCTTCCATTACCGTTAAGCCCTTTCATTTTCACATTAATTCCACATTTAACACCAACCTTTTTACACAGCCTCAAACGCAAACACTCTTCTCTCGCTACTTTCTCTCTCTCTCTCTCCCTCTCTCTATCTCTGAGAGTAACAATGGCAGCAAGACTCTCTCACCTTGCTCCTTTTCTGGTTTTTCATTTTCTTCTTCTCACGGTTCAAGGTTCCAGTAACCCAGATTTTGACGCTCTCGTGGCCTTCAAAACCGCTTCAGACACTTCCCAGAAGCTCACAACGTGGAATACCAGCAGCACCAACCCCTGTTCCTGGAGCGGCGTGTCGTGCATTGGCGACCGTGTCTCGCGACTCGTTCTCGAAAACCTCGACCTCCAAGGCTCCATTCATCCCTTGACTTCTCTAACTCAGCTCCGAGTTCTCAGTCTCAAAGGAAACCATTTCTCCGGTCCCGTTCCCGACCTCTCCAACCTCACCGCCCTCAAACTCCTCTTCTTGTCTCGCAACGCCTTCTCCGGCGAGTTTCCAGGCACCGTCACGTCGCTCTTTCGCCTCTACCGACTCGATCTGTCCAACAACAACTTCTCCGGCGAGATTTCGGCGACGGTCTCCCACTTGACCCACCTCCTTACTCTCCGCCTCGACGGAAACAAGTTCTCCGGCCACATTCCTGCCTTCAACCTCCCCGACCTCCAAGAATTCAACGTCTCCGGCAACCGCCTCTCCGGCGAGATACCCAAAGCGTTATCGAGTTTCCCCGAATCATCGTTCGGGCAAAACCCGTTTCTCTGTGGTGCTCCAGTTAAAAAATGCGCATCCGACCCAACCAAACCCGGATCAGAAGGCGCCATTGCTTCGCCGTTGTTACCACAGAACCATAACAACCCAACACCTACGGTATCATCTTCACCAAGCTCAATGCCAAAAACGTCAACACCAACGTCAAGTAGTAAAAGCCACGAGAAGGGTGCTTCTAAAATAAGCCCGGTGGCGCTTATAGCTATTATAGTTGGTGATGTTTTGGTTCTTGCAATAGTGTCTTTGCTTTTGTATTGTTACTTCTGGAGAAACTACAAGTTAAAAGAAGGGAAGGGAACGAAGCTTTTTGAGAGTGAGAAGATTGTGTATTCGTCAAGTCCGTACCCTGCTCAGGGAGGGTTTGAGAGGGGTCGCATGGTGTTCTTCGAGGGTGAGAAAAGGTTTGAACTAGAGGACTTGCTGCGAGCATCTGCGGAAATGCTTGGAAAGGGAGGGTTTGGGACCGCGTACAAGGCAGTGCTCGATGATGGGAACGTGGTTGCGGTGAAGAGACTGAAGGACGCGCAGATTACAGGGAAGAGGGAATTCGAGCAACACATGGAGGTGTTGGGAAGGTTAAGGCATCCAAATGTCGTTAGTTTGAGAGCTTACTATTTTGCGCGCGAGGAGAAGTTGCTGGTCTATGATTACATGCCCAATGCCACCTTGTTCTGGCTCCTTCACGGTATCTCTAACCTACCTACGTCATTTCGTTTTTTCATTTGCACCTTCATCACTGTTTCTGTTTGTCTGCTTGTATGTCATAGGCCACATGAATGAAATAAAACAAAATTTTACATTTTTTTTTGTTCTTTAGCTGCCCCTCAGCTCAGGAGTGGGTTAACTGCTTTGAAATTAATTTTCGTTGCAACTAGGACCATACCCAGAGCGTGTGTAGGTTACCCTCTATGTAGGTTAGATGTAGTTGGTTTCATGGGGGGGTCCACTTACGAGTCTCCTTCAAATTTTGATCATGAACCATGTGCATTGGGTGGGTTCTCTTTATGATGATTCCTCCCTTCTCCCTCATTGCAACGTTGTAGTAATTTTTTAATACATTGTTTCCAGCAATTGTAGATAAAGGAACTGTTAACTGAACAGTTGTTGTACAAATCACAATCATAAACCCCTGGGAATCGGGACAATGTATTGTAACATGCAGACTGATTTTCCTTTGTCTTGGACTGCTTTTCAATAATAAAAAATAATTAAAGAATAGGAGAACTATAGTGCTTTATGTTCTTTTCCTGCAACATTTGGCCTTTAGCTTTATCTTTTGGCAGCTGAATGTCCAAAAAGTGCATAGGAGGTTTTTGCACCAGGAAATTGAAAGTTATATATGTAGTGGCAAATGTGTAATTAAATGGAACCTGATGGTCGAAATGATGTGCTTCCGACAGGGAACCGAGGACCCGGACGAACCCCACTGGACTGGACCACGAGGCTGAAAATAGCAGCGGGAGCGGCGAGAGGTGTGGCTTTCATTCATAACTCGTGCAAGTCCATTAGACTCACCCACGGTAACATCAAATCCACCAACGTCTTACTCGACAAGCAGGGCAACGCGCACGTGTCTGATTTTGGGCTCTCGGTTTTCGCGGGGCCAGGCCCATTGGGTGGGAGGCCCAACGGCTATCGCGCGCCGGAAGCATCGGATGGTCGAAAACAGACCCAGAAGTCTGACGTGTACTCTTTCGGTGTGCTCCTACTGGAGATTCTAACTGGGAAGTGCCCTTCCGTGGTGGAGAGTGCAGGTAGTGCTTACGGTGGGGTGGTGGACCTGCCCAGGTGGGTCCAGTCAGTGGTGAGGGAAGAATGGACAGCTGAAGTGTTTGATTTGGAACTGATGAGGTATAAGGATATTGAGGAAGAGATGGTGGGGCTGCTTCAGATTGCGATGACGTGTACCGCAGCTGCACCTGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATTGAGGAGTTGCGTGGGGTCGAGGTGTCGCCGTGTCATGACTCGACGGACTCTGTTTCCGAGTCACCTTCCATGTCTGAAGATGCGTGTGGAACGAGTCAGTGA