Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31139 LG8 44748565 44749341 PREDICTED: agamous-like MADS-box protein AGL62
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 44748758 missense_variant p.Val195Ala
T/C 44748874 synonymous_variant p.Thr156Thr
C/T 44748943 synonymous_variant p.Ala133Ala
C/T 44748953 missense_variant p.Arg130Lys
A/T 44749033 synonymous_variant p.Arg103Arg
A/G 44749123 synonymous_variant p.Asp73Asp
G/A 44749145 missense_variant p.Ser66Phe
A/T 44749146 missense_variant p.Ser66Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31139.1
MAMDSGAKKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAHVALVVFSPGEKVFSFGHPNVDAVIDRFLGRAPVQDSGTMQFIDAHRISNVRDLNKQLTQVNELLETERKRGEELNRLRKEAQELMWWTRPTEELTVEQMEQYKTALEELKKHVAQLAERAMLQSAVNQGHQFFPGASSSANFVPQHQPQHQLQPQPPQVFTAQTIPTMLQSYMFPDVTIMQQQHHGFDNMGMGGYGPGPAPAGGFF*


CDS Sequence:
>Vu_31139.1
ATGGCCATGGATTCAGGAGCAAAGAAAAGCCGTGGTCGCCAAAAGATCGAGATGAAGAAAATGAGCAATGAGAGCAACCTCCAAGTCACCTTCTCCAAGCGCCGAAGCGGCCTTTTCAAGAAGGCCAGTGAGCTCTGCACCCTCTGCGGAGCCCATGTGGCGCTGGTGGTGTTCTCGCCGGGAGAGAAGGTGTTCTCCTTCGGCCACCCCAACGTGGATGCTGTGATCGACCGCTTTCTGGGGCGGGCACCGGTGCAGGACTCCGGCACCATGCAGTTCATCGATGCCCACCGCATCTCCAACGTGCGTGACCTGAACAAGCAGCTGACTCAGGTGAACGAACTTCTGGAAACGGAGAGGAAGCGCGGAGAGGAGCTGAACCGGCTGAGGAAGGAGGCGCAGGAGCTGATGTGGTGGACCCGCCCCACTGAGGAGCTGACTGTGGAGCAGATGGAGCAGTACAAGACAGCATTGGAGGAGCTGAAGAAGCACGTTGCCCAACTTGCTGAGAGGGCAATGCTTCAGAGTGCTGTGAACCAGGGTCATCAGTTTTTCCCAGGGGCTTCTTCCTCTGCCAATTTCGTGCCTCAGCATCAGCCCCAGCATCAGCTTCAACCACAGCCTCCTCAGGTGTTCACTGCTCAGACCATCCCTACCATGCTTCAGAGCTATATGTTCCCTGATGTAACCATCATGCAGCAGCAGCATCACGGGTTCGATAACATGGGGATGGGAGGATATGGACCTGGACCTGCTCCTGCTGGGGGGTTTTTCTGA


Promoter Sequence:
>Vu_31139::LG8:44749341-44751341(-)
AAATTGAATAAATATTTTTCGACAACTAGAGAACAATAGATACAAATGCCACAAATATTTTTAAGTTTCATATGGAGAGTTTTACTTTATGTGTAACCCAAAAACTTCAAACTCAGTCAGCATAAAATATGAAATATAATGTTGTTAACATCTTCACAAACGAATTAACTCAGATCTATTTCAAATTCATTATGTAGATTATCTTACCAAAATTTTTAAACTTTCATCTTACTCAATAGAAACTCTCAATACTTCAAAGCTCAAATAGAAAACCTAACTTGCTAATAATGATCCTTATCCACCTAATATGAAATGCAATCATTTTTTTTTATTTTTTAAAAAGAGATGGGTATTGAATGGACAGGAATAGAGGGAGGGTAAAAATATAAAAAAAAAAAATTACATACCAGTGAGGTAATGAAAAAGAAAGAAATGAGATCTTACCGTTGACATTCTAATCTTTATATAAATAAAATTGTGCAAAATAACGTATGGAGTATTATCTTTATATTCTTAATATTCATAAGTTAATCTTTATTTATTTAACTTTTTTATTGAAGAAATTTATCTTAGCTAGAATAGAACTGATACGTACAAGATGTATGCAACTTTCTGATAAGAAGAAATTAGCTGTGTCCAAGTAGAAATTAAGAGTAACAGGGTGAAAAACATTAATTCATTAAATATTTCTTTGAGATTATACTTCGGTATTTAGGAATACATTAAAGTTTATTGAAATAAAGTATGTTTGAAAGATGATGATAGTTCATAATATTAATGACTATTTGTCTGATATATGACATGAAGTGGCAATAAACAATAATGGGACATATTTATTTGTAATTTATATTTAATAATTAATTAATTACCACAAAATAATTAATAACTTGCACTGTTGATTAATGATTAATTTAACACATTTATATGAGTATTAAATTTTCCTTCTTAAAAAGATAGCTATAATAAATAAACATTTTTTTTTATAATTTTTGGTGCATCCTTATTTAATTTTATTTAACATTTAGAAATGTTATAAGCAAATGACTACTCAAAAAAACTCACCTATTTTACTGTTTTTTATTATAAAATTTGAAATACAATAATACGAAGCAGACATACTTCTTTTAACAAAAACATTCAAATACGATTTTAAGAAAGTTTTATTTGCTCTGGAATAACTAATATTTTTTCCTTTTATATCCACACAAATATCTTTAATTTTTTTTTCTCTTTTGAACAATTCAACAGTGATTAATCGTATCAATATTGATTTACTATATTATGAATGTCGGTTTAACTAGATTCTTCTTTTCACCATTTTTTCCAAAAACAAAAATCCAAGGATTTTGTTTAGATAATCTTACCAATAATCTAAGTGAAAAATATTTTATAAGTAAAAAAAATTCCAGTATTAGAAGAAATGTTATGATTTATCTTTTTATTTTTTTTTGTGTAAATCTGATTAATTATTTCTCAAACATCATATATTAAACAAAGGTTGTAAAGCTTGAAATATAAGTTGGGTTAATCAATTGGATAGTAAATACTTATCTTAGTTTTTCACGTAGTTAATTATCATTAGAACAATGGTCTTAATTGTATCAATCATTTAGGTGTTCAAGTTTGTTTTTACAAACCCTATGAATAAAAAGAAACAACATTAAGATTATTAATGACAGCTGCGAAGTGTTCAGGTACACCTTATCTGATAAATGGCCGAGCAAGATTAAGAAAAGGTATGCAATTTTGTCAGAGCTGCTGATTTTCTTACAATAAATATTCTACCATATATGCATCCAAAGAGGATTTTCACAATCTCCCAATCCAGAAACCACTTGAATGAAAATAAAATTGGTGGTTTTTGTTGGAGCCAAGACAGATGCGTGTTGTTTTGGGTGTCTCCATTTACAGACTCAAAACACCTATAAATTCAACCCTGCACTCTTGTTTCTCCACAACATTCTCTTCTTGACTGCGGCATACCCTAAGCTATAGCACCC


Gene Sequence:
>Vu_31139(-)
ATGGCCATGGATTCAGGAGCAAAGAAAAGCCGTGGTCGCCAAAAGATCGAGATGAAGAAAATGAGCAATGAGAGCAACCTCCAAGTCACCTTCTCCAAGCGCCGAAGCGGCCTTTTCAAGAAGGCCAGTGAGCTCTGCACCCTCTGCGGAGCCCATGTGGCGCTGGTGGTGTTCTCGCCGGGAGAGAAGGTGTTCTCCTTCGGCCACCCCAACGTGGATGCTGTGATCGACCGCTTTCTGGGGCGGGCACCGGTGCAGGACTCCGGCACCATGCAGTTCATCGATGCCCACCGCATCTCCAACGTGCGTGACCTGAACAAGCAGCTGACTCAGGTGAACGAACTTCTGGAAACGGAGAGGAAGCGCGGAGAGGAGCTGAACCGGCTGAGGAAGGAGGCGCAGGAGCTGATGTGGTGGACCCGCCCCACTGAGGAGCTGACTGTGGAGCAGATGGAGCAGTACAAGACAGCATTGGAGGAGCTGAAGAAGCACGTTGCCCAACTTGCTGAGAGGGCAATGCTTCAGAGTGCTGTGAACCAGGGTCATCAGTTTTTCCCAGGGGCTTCTTCCTCTGCCAATTTCGTGCCTCAGCATCAGCCCCAGCATCAGCTTCAACCACAGCCTCCTCAGGTGTTCACTGCTCAGACCATCCCTACCATGCTTCAGAGCTATATGTTCCCTGATGTAACCATCATGCAGCAGCAGCATCACGGGTTCGATAACATGGGGATGGGAGGATATGGACCTGGACCTGCTCCTGCTGGGGGGTTTTTCTGA