Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31123 LG8 44580721 44583917 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 44580738 synonymous_variant p.Ser6Ser
G/C 44580744 missense_variant p.Leu8Phe
A/C 44580779 missense_variant p.Gln20Pro
G/C 44580839 missense_variant p.Ser40Thr
C/A 44580846 missense_variant p.Asn42Lys
C/T 44580849 synonymous_variant p.Gly43Gly
G/A 44580990 synonymous_variant p.Ser90Ser
C/T 44580995 missense_variant p.Ala92Val
G/A 44581103 missense_variant p.Arg128His
C/A 44581104 synonymous_variant p.Arg128Arg
C/T 44581212 synonymous_variant p.Asn164Asn
G/T 44581376 missense_variant p.Arg219Leu
T/G 44581398 synonymous_variant p.Gly226Gly
G/T 44581399 missense_variant p.Gly227Cys
C/G 44581489 missense_variant p.Pro257Ala
A/G 44581491 synonymous_variant p.Pro257Pro
A/G,* 44581497 synonymous_variant p.Pro259Pro
G/*,A 44581503 synonymous_variant p.Pro261Pro
G/*,C 44581507 missense_variant p.Ala263Pro
G/A 44581616 intron_variant
T/A 44581621 intron_variant
G/A 44581659 intron_variant
A/C 44581665 intron_variant
T/C 44581690 intron_variant
A/G 44581708 intron_variant
C/T 44581718 intron_variant
A/G 44581732 intron_variant
C/T 44582021 intron_variant
A/T 44582029 intron_variant
A/G 44582098 upstream_gene_variant
A/G 44582117 upstream_gene_variant
A/C 44582148 upstream_gene_variant
A/T 44582171 upstream_gene_variant
G/A 44582218 upstream_gene_variant
A/G 44582332 upstream_gene_variant
C/T 44582347 upstream_gene_variant
C/T 44582355 upstream_gene_variant
A/G 44582362 upstream_gene_variant
A/T 44582383 upstream_gene_variant
C/T 44582395 upstream_gene_variant
T/A 44582398 upstream_gene_variant
A/G 44582419 upstream_gene_variant
A/C 44582420 upstream_gene_variant
C/T 44582421 upstream_gene_variant
G/A 44582447 upstream_gene_variant
G/A 44582475 upstream_gene_variant
T/A 44582493 upstream_gene_variant
G/A 44582494 upstream_gene_variant
A/C 44582509 upstream_gene_variant
C/A 44582562 upstream_gene_variant
A/C 44582582 upstream_gene_variant
G/A 44582613 upstream_gene_variant
C/G 44582616 upstream_gene_variant
A/C 44582722 upstream_gene_variant
A/T 44582848 upstream_gene_variant
T/A 44582914 upstream_gene_variant
T/C 44582924 upstream_gene_variant
C/G 44582953 upstream_gene_variant
G/A 44582986 missense_variant p.Ala327Thr
A/C 44583026 missense_variant p.Asn340Thr
C/T 44583031 missense_variant p.His342Tyr
C/T 44583058 stop_gained p.Arg351*
A/G 44583067 missense_variant p.Thr354Ala
G/A 44583069 synonymous_variant p.Thr354Thr
C/T 44583086 missense_variant p.Pro360Leu
G/T,A 44583087 synonymous_variant p.Pro360Pro
G/A 44583089 stop_retained_variant p.Ter361Ter
A/T 44583105 stop_lost p.Ter366Tyrext*?
C/T 44583110 missense_variant p.Ser368Phe
T/G 44583111 synonymous_variant p.Ser368Ser
C/T 44583120 synonymous_variant p.Cys371Cys
G/A 44583173 missense_variant p.Gly389Glu
C/T 44583381 missense_variant p.Thr412Met
C/A 44583401 missense_variant p.Leu419Met
C/T 44583464 missense_variant p.His440Tyr
C/T 44583561 upstream_gene_variant
C/T 44583605 upstream_gene_variant
T/C 44583803 synonymous_variant p.Leu505Leu
G/T 44583805 missense_variant p.Ser506Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31123.1
MVSRMSGLLCMLVILLTICQSYAQPSFLYHFCMNDKGNYSANGTYHNNLNTLLSNLSSNTDIDYGFYNFSLGQDTDTVNAIGLCRGDVKSDACRRCLNDSKVLLQQRCPNQKEAIGWYDNCMLRYSNRSLFNTMETTPSFYMWNPGNATDFDQFNQALRNLLDNLVGHATLGDSKRKVAAANVSGPAFQNIFALVQCTPDLSERDCTECLSGVIAEIPRCCDGKQGGRIVRPSCNFRYETYSFFDPTNVEIPAAPAPAPAPAAAPAPNVSALPPPPPIDTLSTEGKSNTSLTVIAIVVPIAFVILVILMCVCLRTRKSRKQIEDEVGRAQLDWEKRHKIITGIARGLLYLHEDSRLTIIHRDLKASNILLDAEMHPKISDFGMARLFEVDQTQDNTSRIVGTYGYMAPEYVFYGQFSVKSDVYSFGILVLEIVSGQKNSWAQRGENEGDLLTYIWQNWREGTVLNTIDPTIADSSRNEIVRFIHIALLCVQEKVGDRPTMASIVLMLSSHSVSLPLPSQPAFSVVSRNFSVIPSEDYDPEASVN*


CDS Sequence:
>Vu_31123.1
ATGGTTTCAAGAATGTCCGGATTGCTTTGTATGCTTGTCATACTCCTAACAATATGCCAATCCTATGCCCAACCAAGTTTCTTATACCATTTCTGTATGAATGACAAGGGTAATTACAGTGCCAACGGCACCTACCACAACAATCTCAATACCCTTTTGTCCAACCTCTCTTCAAACACAGATATTGACTATGGCTTCTACAACTTTTCGCTTGGCCAAGATACTGACACAGTAAACGCAATTGGGCTGTGCAGAGGAGATGTTAAGTCGGACGCTTGCCGTAGATGCTTGAATGATTCAAAAGTCCTTCTCCAGCAGCGGTGTCCAAATCAGAAGGAGGCAATTGGTTGGTATGACAATTGCATGTTACGCTATTCCAACCGCTCACTGTTCAACACCATGGAAACCACACCTAGTTTCTATATGTGGAACCCTGGAAATGCAACAGACTTTGATCAATTCAATCAAGCGTTGAGGAACTTGCTAGACAACCTCGTAGGCCATGCTACACTAGGGGACTCCAAGCGTAAGGTTGCTGCTGCAAATGTTTCAGGACCAGCCTTTCAGAATATATTTGCTCTTGTGCAGTGTACACCTGACTTGTCAGAACGAGATTGCACCGAATGCTTGAGTGGGGTTATCGCAGAAATTCCACGATGTTGTGATGGCAAGCAAGGTGGTAGAATTGTAAGGCCTAGTTGTAACTTCAGATATGAGACATACAGCTTCTTTGATCCTACCAATGTTGAAATACCAGCAGCACCGGCACCAGCACCAGCACCGGCAGCGGCACCAGCACCAAATGTGTCTGCTCTTCCTCCTCCTCCTCCGATAGATACCTTGTCTACAGAAGGAAAGAGCAACACTTCTCTAACTGTAATAGCAATAGTTGTGCCAATAGCCTTTGTCATACTAGTAATTCTTATGTGCGTCTGTTTGAGAACGAGGAAGTCACGGAAACAGATTGAAGATGAAGTTGGGCGGGCACAATTGGATTGGGAAAAGCGACACAAAATCATAACAGGCATAGCTAGAGGTCTTCTTTATCTTCACGAGGATTCACGTTTGACGATCATTCACCGTGATCTCAAAGCAAGTAACATTCTTTTAGATGCCGAGATGCATCCAAAGATATCAGATTTTGGCATGGCAAGATTATTTGAAGTGGATCAAACTCAGGACAATACTAGTAGAATTGTTGGAACCTATGGATATATGGCACCAGAGTATGTCTTCTACGGACAATTCTCAGTGAAATCTGATGTTTATAGTTTTGGCATATTGGTTCTTGAGATTGTAAGTGGCCAGAAAAACAGTTGGGCACAAAGAGGAGAGAATGAAGGGGATCTTCTAACCTATATATGGCAAAACTGGAGGGAAGGGACAGTGTTAAACACTATTGATCCAACAATTGCGGACAGTTCGAGAAATGAAATAGTGAGATTTATCCACATTGCATTGCTTTGTGTTCAGGAAAAAGTGGGTGATAGACCAACCATGGCCTCTATTGTGCTCATGCTTAGCAGTCACTCTGTTTCGCTTCCATTGCCCTCTCAGCCTGCTTTCTCCGTCGTAAGCAGAAATTTCTCAGTCATTCCATCAGAAGATTATGATCCAGAGGCAAGTGTAAACTAA


Promoter Sequence:
>Vu_31123::LG8:44578721-44580721(+)
ACTTTTGATAAAAACAGCCTATCTGGTCTCAATCTAACTTTAGCCAACTTCGATCATGAAAATGTTAAATTATTACAAATGGGCATTTCATTATGTGCAACAAAGAGTTAGACTGGGAGGTTTAGTGAATTGTGAGTGAAAATTCACTTAGTAGTTGTGTCATGTGATGGAAGCAATTAGACCGTTTGAGCCATTTTTTTTTTACTTTATCAAAGTAGTGTGTTTAAAAAAAAATTAACAAAATAGATAATGTTTAAAAGGATTATAATTAAAAATCATATCATATCAAGACCGTACCACTTCTTTACATTAAACTGTGTCAATTCACTATAACTTATTTTAGAATATTTTTAAAGATGAAACCATATTAATTAATACGACACAATTTTAGTTAAGAGCATTTTAAATTGAAGTTATATTATTTTTTCACAACATATATTATATACTTTTGCAAAAATATGGATTTAATTGAAAATGTATAAATTTTAAGTGACTAATGTGTAAACTGTGTTTTAACTTTTTATATCAAAAATTTAATTAATCTTCTTCAAATATATATTTATTATTTGATAATTTTATTAGCATTAATTCATCATAATATTTTTAGAACAGTATGTTTATGAATTTTTTTAGTTATATATATGTATGTATACATGTATATATATGTATATTCAACTGAAATTATTTAATAGAAACGGTTTAATTTTTATGTTAAGATTTAGTTTCATAATGTATTGGCATTGTTTAGGCCTGTTATCTTCCTTTTCACACCCCTACAGTACGCTCATTGGTAAACGTAACGGCACTTGATTAGTTTACGAATCACCATCTACATTGACGATGGAAGTGGTCAACACTCCTGATATTTGAAAGAGAAATATGTGATCACTAAAATATTCTGTTGGAAAACAGGATCAAAACCACTTCCAAAGTAAAATACAAAAAATGGATCAATTTTAAATAATTATTAACACATATAATGCATGCATTAATTTAAAGTATCTATATGTACATAATGCAACTTTTTTTTATATTTTTTTAATTATATTGACAGTTAGTAGTTACTATTATAAATGTACTAATTATTTACAAAATATGGTTCTAATTAATATACAAAACATATCACTAATTCAAATAATATGTCAATTAAAAAGTTCTGCTTGACATTAATTATAACCAAGTAATGTTCAGTGTTAGTATATAATAAACATTCAGAACAAAATTACAATAACATATTAAAAGATAAATTATAGGAGTTAAAGTATATTATATTTTTTTTAAAGTAAAACATTGAAAACAGAGTAGTAAATTGAAAAGTAAGAACATTAATATTAAAAAAATATAAAATGTCATGTTATTAAAATAAAATAAAAATATAACTACTTCATTTATATAAAACAGCAAATATAGTACTGAAATGAAATTATGTATCTAAGTAATCTGGGGCTGTTAATTTGAGAAGGAAATCAGCAGTGACGACTGTGTATATTTTACCGTATACTACTATACTAGTGATTCCTGTAACATCACATTAATTTTTTGTAATAAAGAATTGTTCAAAGTCCAACTTGGTAGTCAATTGAGTGAATAAATTATATGTTTTGTAAATTGCAATTAGAGGAATAGAAGAGTGATGCACTTTTACATTTGGGATATAATAAAACATAAAATAATTATAAATGATTGAATTTTTATATTTTTTTAAGAAAGAATAAAATAAATAAATAAATAAATTAATTAAATAAATTTAAAAAATTTAAGTGTATCAAGATATTATTTTTCAAATGAAAAAGTGATAGTAACTTGGATATCGGTTCGAAACATGAGGCTAGTTTTTGCCTTCTTCTTTTCAACCAACTTTCATAATCACATTAATACGGTGACCCGTAAACAGGGGCAATTACAGGTACCTTAAAGTCAAAAGTTAAATGTTCATGTTCATCAACAATAAATCTTCCATGTGTTTTCTCTTACTGCCTTACTCCGGACAACTGTGGCCA


Gene Sequence:
>Vu_31123(+)
ATGGTTTCAAGAATGTCCGGATTGCTTTGTATGCTTGTCATACTCCTAACAATATGCCAATCCTATGCCCAACCAAGTTTCTTATACCATTTCTGTATGAATGACAAGGGTAATTACAGTGCCAACGGCACCTACCACAACAATCTCAATACCCTTTTGTCCAACCTCTCTTCAAACACAGATATTGACTATGGCTTCTACAACTTTTCGCTTGGCCAAGATACTGACACAGTAAACGCAATTGGGCTGTGCAGAGGAGATGTTAAGTCGGACGCTTGCCGTAGATGCTTGAATGATTCAAAAGTCCTTCTCCAGCAGCGGTGTCCAAATCAGAAGGAGGCAATTGGTTGGTATGACAATTGCATGTTACGCTATTCCAACCGCTCACTGTTCAACACCATGGAAACCACACCTAGTTTCTATATGTGGAACCCTGGAAATGCAACAGACTTTGATCAATTCAATCAAGCGTTGAGGAACTTGCTAGACAACCTCGTAGGCCATGCTACACTAGGGGACTCCAAGCGTAAGGTTGCTGCTGCAAATGTTTCAGGACCAGCCTTTCAGAATATATTTGCTCTTGTGCAGTGTACACCTGACTTGTCAGAACGAGATTGCACCGAATGCTTGAGTGGGGTTATCGCAGAAATTCCACGATGTTGTGATGGCAAGCAAGGTGGTAGAATTGTAAGGCCTAGTTGTAACTTCAGATATGAGACATACAGCTTCTTTGATCCTACCAATGTTGAAATACCAGCAGCACCGGCACCAGCACCAGCACCGGCAGCGGCACCAGCACCAAATGTGTCTGCTCTTCCTCCTCCTCCTCCGATAGATACCTTGTCTACAGAAGGTAAACGTCAACTCCTTCTTGAAATGTTGAAACTCAAAATTTGACGATTTTAATAAATTCGAAGAAATTAGAAGTGCATTTTACCGAACCTACAAAATTATTTTCCATGAAAGTGATTAGACTTGTTGAGAACTAATTTATTATCCTCAATCCTATAAATATACTAATTATTGAAGTTTCTGTTTTGGCAGGAAAGAGCAACACTTCTCTAACTGTAATAGCAATAGTTGTGCCAATAGCCTTTGTCATACTAGTAATTCTTATGTGCGTCTGTTTGAGAACGAGGAAGTCACGGAAACAGATTGAAGGTAAGCTAACATCACATTCTCTTTTATTATGATATTTGTTGATTTAATCCTTTGCTGTCTGCAATGGAGTTAATAGGGTAAAACTGAAGAAGTACACTATGGTTGCTACCCACAATGACAATAGAATTTGAAATTTCTTCCACTGTTAGAAAAAAGTGCATGGTTCAATCACTGCCAGGAAATAGTAAAATGAAAAAAAGGACACTTGCAGCAATAAGTGTTTATATAATAAAATACATTTGGAGAAAGAGTAGAAACTTTTTTAAAATGTCTGAAAATCAGCTTATCCAAAATAATTAGTTGTAGAATTTCTGATTCACATAATACAAATAGTCTGAATAAACTTATGCCAAGTATCACTTAACTTTAACATGTCAGCTATAATAAATAGGAGATATCATAAATTTTATATTATAAGTTCTACCAAGTTCCCAAAAGAAAGTTATTATTATTATCATAAATAAGCAAGTAAGCGTCTATAAGAAGAATATTTTCCTAAAAAGAAGCAGAATTCCATTTGGAGAACTGATTTGTTGCAACTCATTCCCAGTTCAAGCTGAAAATCGTGATGAAATCACATCAATAGAGACATTGCAATTGGACTTATCCACTGTCATGACGGCTACAAACAACTTTTCTGATGCAAATAGGCTAGGAGAAGGAGGATTTGGACCTGTTTACAAGGTAAGTATAACAGTGTAACAAAAAGATGTACATCACATCTACAAAATGTACTGGTATACCTGATAGGCCGTTACCCTGACTTACATTCATAAACTTTAAATTTTCAGGGTAAGCTCTCCAATGGTCAGGATGTTGCAGTCAAAAGGTTGTCCAAGAACTCCCTCCAAGGAGAAATTGAGTTTAAGAGTGAGGTGATGTTAGTGGCCAAACTTCAGCACCGAAATTTAGTTAAGCTGATAGGATATTGCTTGGAAAGAAGAGAAAGGCTATTGGTGTATGAATATGTTCCCAACAAAAGCCTCGATTTCTTCATATTTGGTAAGTCAAAACTAAAGGAACCGAACCATCTATTCTTCATTTATAAACATTCTAACTCGTTGAGAATATCGTATCTTGGCTTTGGTTTGTAGATGAAGTTGGGCGGGCACAATTGGATTGGGAAAAGCGACACAAAATCATAACAGGCATAGCTAGAGGTCTTCTTTATCTTCACGAGGATTCACGTTTGACGATCATTCACCGTGATCTCAAAGCAAGTAACATTCTTTTAGATGCCGAGATGCATCCAAAGATATCAGATTTTGGCATGGCAAGATTATTTGAAGTGGATCAAACTCAGGACAATACTAGTAGAATTGTTGGAACCTAGTAAGTATTGGAATGCCCTGTGCCAAATAATTTATATTAATCACTGTCAATATTTCTGATCTCTAAAGGTGATCTTAACAAAGTTGTCAATATTTGTTCGTAACTGAGCTAATGAGATGGTCCATTTGGACATGCAGTGGATATATGGCACCAGAGTATGTCTTCTACGGACAATTCTCAGTGAAATCTGATGTTTATAGTTTTGGCATATTGGTTCTTGAGATTGTAAGTGGCCAGAAAAACAGTTGGGCACAAAGAGGAGAGAATGAAGGGGATCTTCTAACCTATGTAAGTAGTAATTATTCTTTGAATGACTGACTTGTTTTCCTTATCCTTAGGTTAGATTCCGTCAGTTTCTTACAGAATTGTAATCTTTAAGACTGAATCTGAACCAATATTTGTACCGTTTATTGATGAACTGCTTGCAGATATGGCAAAACTGGAGGGAAGGGACAGTGTTAAACACTATTGATCCAACAATTGCGGACAGTTCGAGAAATGAAATAGTGAGATTTATCCACATTGCATTGCTTTGTGTTCAGGAAAAAGTGGGTGATAGACCAACCATGGCCTCTATTGTGCTCATGCTTAGCAGTCACTCTGTTTCGCTTCCATTGCCCTCTCAGCCTGCTTTCTCCGTCGTAAGCAGAAATTTCTCAGTCATTCCATCAGAAGATTATGATCCAGAGGCAAGTGTAAACTAA