Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_31032	LG8	43731781	43732905	PREDICTED: transcription factor DICHOTOMA-like	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
T/C	43731808	synonymous_variant	p.Leu366Leu
C/T	43731987	missense_variant	p.Val307Met
A/G	43732311	missense_variant	p.Ser199Pro
C/A	43732316	missense_variant	p.Arg197Met
G/T	43732643	missense_variant	p.Ser88Tyr
C/G	43732805	missense_variant	p.Ser34Thr

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_31032.1

MFSSTYDSNLFPNFPSSSYPILPFLIDPENDFASNTLFDDPLLVPFTPITHDPPFPEETVANFAVADCTAILEQDANTNYGSHNGSMSNFLTQKPAIAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELAQSKHSGSISGGDKCSRDASVDSNNNKSLAGSGVDGSKGRKSKSAQKDDACVQTKKESRERARARARERTCYKMCSTRRVQQDFDERCPVTANTQMLHQLRSSILPEPEAYARWVQPYNPFLIHNEAPRDGFDVIEESIMIKRNMKPSTVMASHHQNQNQNQSQNLVIPRDASFNNNVCPLLPYSTPDWDTNGAFTGYSNFCSIGTMNLSTCFMNPW*

CDS Sequence:
>Vu_31032.1

ATGTTCTCTTCCACATATGACTCCAACCTTTTTCCAAACTTCCCTTCTTCTTCTTACCCTATCCTTCCTTTTCTCATTGATCCTGAAAATGATTTTGCAAGCAACACCCTTTTTGATGACCCTCTTCTTGTTCCCTTCACACCCATCACCCATGATCCTCCATTTCCTGAAGAGACTGTTGCTAATTTTGCAGTTGCTGACTGCACTGCCATTCTTGAACAAGATGCAAACACTAACTATGGTTCCCACAATGGTAGCATGTCCAATTTTCTGACCCAGAAACCAGCCATAGCAAAGAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGACCGTAGGGTGAGATTATCAAGTGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCAAGTAACACCCTTGAGTGGCTTTTCACAAAGTCTGAGAATGCGATCAAAGAACTAGCCCAAAGTAAGCATAGCGGCAGTATTAGTGGGGGTGACAAGTGTTCCCGCGACGCTTCTGTGGATTCAAATAACAACAAATCATTGGCGGGTAGTGGGGTTGATGGTTCCAAAGGGAGGAAGTCAAAATCGGCACAGAAGGATGATGCTTGTGTTCAGACCAAAAAGGAGTCAAGGGAAAGGGCAAGAGCAAGAGCAAGAGAGAGGACTTGCTACAAAATGTGTAGCACTAGAAGGGTGCAGCAAGACTTTGATGAAAGGTGCCCTGTAACTGCAAACACTCAAATGCTGCACCAATTGAGGTCATCCATTCTGCCTGAACCTGAAGCTTACGCGAGATGGGTTCAGCCTTATAACCCTTTTCTCATTCATAATGAAGCACCCAGAGATGGCTTTGACGTCATTGAAGAATCTATTATGATTAAAAGGAATATGAAGCCGTCAACTGTGATGGCTTCTCATCACCAAAACCAAAACCAAAACCAAAGCCAAAACCTTGTGATCCCTAGGGATGCAAGTTTCAACAACAATGTGTGCCCCTTGCTACCCTATTCCACTCCAGACTGGGACACTAATGGGGCCTTTACTGGATACTCCAACTTTTGTTCAATAGGAACCATGAACCTATCTACATGTTTCATGAACCCGTGGTAA

Promoter Sequence:
>Vu_31032::LG8:43732905-43734905(-)

ATAATTTTTTTCCACATAAACATTGGTGATGTGACATCAAACCATTTATATAACCAGAATATATATTTGTATTGATTCAACCTAACTTTTGAATTATATCTAATTTTGCTTTAAGAAACTTTTAATGATTTTCAATAATCAAATATTGATTATTTTCACTTTTAAGTATAAATAAATAAAGATAAATTTTAAAAATTAACTCAGGATAAGAAGATATATAACGATTTATTTCAAAGACATGACTTTACAAAGTGAAATATATAACAATATTTTTCTATCTTGCTAATATAAATACCAAGACACGATAAATCTAAGCTATATAAGATTTTTCATAACTAAACTAATATGGTAGTTGTATTGATGTCATTTTCTTTGTTTTCCTATTTATAGTTGATCATTGTATTTATAGCTGTCTTCTGAGAATTCGTTTTATTTAAAATTTAAAAGAATGAATGCCAATTTTAAAACTAAAAACAAGAGTTTAAGTATAATTTACATAATTTCATCAAAATAAGTGTAGTTTATCTTACAATAAAAATAAATAAGAATAATTTTGATCATAATATTATTATTTTTATTTGTTTTATAAAATTTGAAATACATAATAATAATAATTTAAGGATAAAAATAATTAAATTTATATAAAATTAAGTCTTAGTTTGTTTATAATTGTTATCTATGGTGTTTTTGAGAAAAAAAAACAATAAGTTTTATATTATTTTTTATAAAAGTTATGAAATTTCCTTTTTATTAATTTCATTTCCATACCAATATGTATAAAAACTAATTAAAAGTTAGATAAGAAAAATGAACATGATCTTAAATTTAAAAATAAATAGAGTATTATGTATCCAGGGAGGTTGCAATCGCTGTCAGAGAGATGAATGAGCTTTCTTCGGGATTGAAATAAAGTTATGTGGGCGCTTTCAAAAAGAACGCCAAGTTTTTAGTCAATTTGTACTGTATTCAGCTTTTTCAGAAAATGAAAATGTTACCGTATTTTTCCTGACGAGTTTGTATATTTGCGGTTGAGTTTTTACGGAAGAAACAGCTGAGAAGCTATTACAATCTCTCACCTACCTTTACACTTCCTGTACGGCTCAACTTCGAAACTTCATTACCTTTCGGATAAAACCCATCAAAATTAGATCCACAATGTTAGGGCTATATTCACTTTTTTTCAAAACTACAGTTAAAACTCAATGAATCATCTAATATAAAACCCAAACCACACCATCCCCCATTAACCACTTTTTCTCAACTTTTTCCACGTACCATCCTTCTCTTCCTCGCATTCTTCGCTATCTTTTATGTTGTATTGAATTCGTCTCTAAAGAATACTTATGTTATGTTTGTAACTTAATGTTTTGCGCAACATTGTCGACAATGTTTAATATGATGTTATTTTTGGGTTATCATGACATTAATATAAAACATCTATTGGCATTTTACGAGTAATCAGTGTAAAGAGAGTTGTTTTTTTGTTGATTTGTTTGTAAGATTCAAACTTAAGACATTGTTTACATGAACAGTTGGCGAATGGGATGGTTCTTGGCACAAACCAAGAAATTATTTGTGTCCTTCTGATCGATGTGCTGTTGTAATGGCTGAGCCATATTTTCTCATCTGCCCTAACCCAGATTGGTAATAATATAGTTGTATTCACAAAATAAATGAAACTATGATCAAAGTACTTCATTGGCGTAAACTAAATCTCCCTTTCCGTTGTCCTCATTTTCCTCAACAACACAAACTTCTCATTAAAAATTAAAAAAAAAAAGTTTTTAATGGTCATGATAGTAGTACTTCGCACTAGTGGCTAGTCTCCTTTCAAAGATAGAGATAGGGAATCTCAGAAAATGATTATATAAGAGTAGTAGGACTGTACTTGGACCGTTAAGTAGGAGCAGAGAAGCTACCTCTGTGTTATAATTGTGATCTTTTTACTCGTTGCACAATAGCTAGGGTTTTCACCCACTGAAATTGGTTCCAATCTGCAG

Gene Sequence:

>Vu_31032(-)