Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30889 LG8 42211530 42212712 PREDICTED: probable WRKY transcription factor 27
Map

Annotations  
category   relationship type   keyword
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
G/A 42211587 missense_variant p.Thr302Met
A/T 42211656 missense_variant p.Phe279Tyr
A/T 42211676 synonymous_variant p.Ser272Ser
A/G 42211678 missense_variant p.Ser272Pro
G/T 42212207 splice_region_variant&intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30889.1
MDEDWDLFAIVRSCQSATNTSTAAIPETTTDTTSSSLFTSFLKEDRYDAFSFPNTVQPIPNEFHQLHRFFSPFNPTTTNATTLSAPRINPNSPYFAQQESQQISDHLPILPHFLPEPSTPSFNRFPDHQQQQQNQLQLLHKQEFHTPQNNSPTVSPNAQPQTPKSRKRKSQQKKMVCQVTADKLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCMARKQVERSNTETDVFIVTYTGDHSHPRPTHRNSLAGSTRSKNPTTNPPALHGSLSFQAAPFSSSSSSPPLSPTSPSEDPPEAGDVEPDPDMETDMDDDGDIR*


CDS Sequence:
>Vu_30889.1
ATGGATGAGGACTGGGATCTCTTTGCCATCGTCAGAAGCTGCCAATCAGCTACCAATACTTCCACCGCAGCAATTCCAGAAACCACCACCGATACTACTTCATCTTCTCTCTTCACTTCCTTTCTCAAGGAAGACAGATACGATGCATTTTCCTTTCCCAATACAGTCCAACCCATACCAAATGAGTTTCACCAGCTACACCGATTCTTTTCACCCTTTAACCCCACCACCACCAACGCCACTACCCTCAGTGCTCCTCGCATCAATCCTAATTCCCCTTATTTTGCCCAACAGGAAAGCCAGCAAATTAGTGACCACCTTCCCATTTTGCCTCATTTTCTGCCAGAACCCTCCACTCCCAGTTTTAATAGATTCCCTGACCATCAACAACAGCAACAGAATCAACTACAGTTACTTCATAAACAGGAATTTCATACACCCCAGAACAATTCACCCACAGTTTCACCAAACGCACAACCTCAAACACCCAAATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGTCAGGTAACCGCAGATAAACTCTCGGCAGATTTGTGGGCGTGGCGAAAATACGGACAAAAACCAATTAAGGGTTCTCCGTATCCAAGGAATTACTATAGGTGTAGCAGCTCCAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACTGAAACCGATGTGTTCATCGTTACGTACACCGGAGACCACTCGCATCCCCGGCCAACCCACCGGAACTCCCTCGCCGGAAGTACCCGAAGTAAAAATCCGACAACGAATCCGCCGGCTTTACACGGGTCACTCTCCTTCCAAGCCGCCCCCTTTTCTTCTTCTTCTTCTTCTCCACCACTCTCTCCAACGTCGCCGTCGGAAGATCCACCAGAAGCCGGCGACGTTGAACCTGACCCGGACATGGAAACCGACATGGACGATGACGGTGACATCCGATGA


Promoter Sequence:
>Vu_30889::LG8:42212712-42214712(-)
TTTCTGTTTAGTACCCGATTTTAAAAATGTAGGCATTTGGTACCTATGTTTTGAAATTTGTATCAATTCAATCCTATCCAGTTAACGGCGTTATAATTGATGCGAGAAATTAAGGACGTTAATGATAGCCTGGGATTTCTCGCATCAATTATAACGCCGTTAACTGGATAGGATTGAATTGATACAAATTTCAAAACATAGGTACCAAATACCTACATTTTTAAAACTGGGTACTAAACAGAAAATTACCTCCTAACATGGGGACTAAGTAGGTAATTAAGCCTATGTTTCACTGTTCTGGAATAACATCTATCGCCTAGGTTATGTACACTTGGAGGAGATGATTTGGGGGAGAGTGAGTGAATGAATTTGAGTGTAAATTTTTTGTTGTTTATTTGAGTAGATTTGAAGGTGAGTGAGAGTTAATTTAAAAGTAAAGTTTATAAAAATTAGTGTAGGCCAATGTGATAGATAAAAAAAATTGTTTAATTGATATATATTAAAGATTACCAAAATATCCTTAATAATAAAAATAATATAAAATTATAATGGTTAACATTATATATAATTGTAAAAATTATTATAAGAAGACAAAAAAATAAAATTAATTTTAACATGAAAAAAATTGTATTATTATTATTTTATTTTGTTATTATTATTATTATTATTATTAAATAAATTTACAAAAATAAAAAGGGTTTAGCTTGTCATGAAACTAATTCTTCATAGGGCAAAGAAAACAAACGTGCAGGGGGCAAGAAAGGTTTTGAATTCATATATCCTCAAATCTCTCCTGCACAGCGAAGATGAAAAAATCCCCCATCCCCCAAATCACCTCTTTTCTTTGCTTCCAAATACGTTCAAATGAACATGAAAACAATCTTAAATCCATCTGTGCTAATCTTTGTAAACAGTACCATGACTCCAAGTGAACAAAGGCTAATGATTAATTCAAAACCAGAAACAAAATTAAAAAAATTGTTGTAGAAGAACTAATTAAATAAAAGAGATTGTATCCTATTGAGTATACGTGTTAATCCTTTTTCTCGTCTCTTGAAAAGAACGATTTTGCATTTGATTTTTCGCTGACGAAGTCGTTTTCCTTTCTTCTCCTATATAAGAAGTTAACTTGAGTATTATAGTGTAAATTCAACTTATATCTAATTGAACATCGAACATTCAATTATGTTATACTATGTTTCATACAATATTATATATGTGTATTTTGATATCAATTTTATAAACTAGTATACATAATATTTTGGATAATATGTATATACGAATAATTCATTTGTATAGTTAAAATATTTTTTAAAACATCAAAATAATCATTGTTTCGACAAAAGTATATTTCCCTGGTTTGTCTATATATTAAAGTATAACACGAATAACATTTGGTTGTCTAACTTCAACGAAAACCAGAGTAGATGGATATCACAAGTTGTGGCTCAGTTATAAGTCATGTCATGCAGAAGAAGATGACACAGAGTGACTCCAACGCGACAGAAGGGCGCGTGAGGAGCCTGTAGGTACCCTCCACGCTTCATTTGATGCAGTGCCCAATCAGATCCCAATGCTGTTTGTTAACAACTGTGAATGTGAGTGTGAGAATAGGACACGAACTTTCCCACTCAGATCATGCCATCAGAATCATCATCATATCACCCTTAACTTAGGTCCCCCTTTGACATTTTCACAATGTCAATGAAAAAGCCAAAATTTTCTCTATTTTATTTTTGGACATAAAGAAAAATACCAACTAAGCAAGCAAAGCATATCTGTCTAACTCCCCCAACCCCTACAAAGTTCCTCTTTCACATACAATCTCTCTCCCTCTTTTCAAATTTTCAAGTATAAATAATTAATTGCCGAACTCAGTCAGTGCTCCACCAACCCCTCTTGCTTCTTCCTCTCCCCTTTCTCTTTCCATTCACCCAAAAGTCAGCGCCATCTTTTCTGCCCTATTTTCTTCCAAAACTCTCTTTGCCCTGCGTACATAC


Gene Sequence:
>Vu_30889(-)
ATGGATGAGGACTGGGATCTCTTTGCCATCGTCAGAAGCTGCCAATCAGCTACCAATACTTCCACCGCAGCAATTCCAGAAACCACCACCGATACTACTTCATCTTCTCTCTTCACTTCCTTTCTCAAGGAAGACAGATACGATGCATTTTCCTTTCCCAATACAGTCCAACCCATACCAAATGAGTTTCACCAGCTACACCGATTCTTTTCACCCTTTAACCCCACCACCACCAACGCCACTACCCTCAGTGCTCCTCGCATCAATCCTAATTCCCCTTATTTTGCCCAACAGGAAAGCCAGCAAATTAGTGACCACCTTCCCATTTTGCCTCATTTTCTGCCAGAACCCTCCACTCCCAGTTTTAATAGATTCCCTGACCATCAACAACAGCAACAGAATCAACTACAGTTACTTCATAAACAGGAATTTCATACACCCCAGAACAATTCACCCACAGTTTCACCAAACGCACAACCTCAAACACCCAAATCAAGAAAAAGGTCTCAACTTTTTCTTTCTTTCCTTTGCAACCCAAATAATCCAACTTTCAAATAAACACCTATAAAAACAGTATATTTACATTTACGATTCCCTTTTCTTGTTTTGTAGAAAAAGCCAACAGAAGAAAATGGTGTGTCAGGTAACCGCAGATAAACTCTCGGCAGATTTGTGGGCGTGGCGAAAATACGGACAAAAACCAATTAAGGGTTCTCCGTATCCAAGGTACATCACCTGCATGTACTCATAAATTAAAATTCTCTTCGAACTTTCCATTCAGTTTCTGATTGTTTCTCGGGAAAATGCTAATACCTAATTACACACACATATTCCTAGGAATTACTATAGGTGTAGCAGCTCCAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACTGAAACCGATGTGTTCATCGTTACGTACACCGGAGACCACTCGCATCCCCGGCCAACCCACCGGAACTCCCTCGCCGGAAGTACCCGAAGTAAAAATCCGACAACGAATCCGCCGGCTTTACACGGGTCACTCTCCTTCCAAGCCGCCCCCTTTTCTTCTTCTTCTTCTTCTCCACCACTCTCTCCAACGTCGCCGTCGGAAGATCCACCAGAAGCCGGCGACGTTGAACCTGACCCGGACATGGAAACCGACATGGACGATGACGGTGACATCCGATGA