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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30794 LG8 41109254 41110369 PREDICTED: phytosulfokine receptor 2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to oxygen-containing compound, protein phosphorylation, response to organonitrogen compound, hormone-mediated signaling pathway, protein phosphorylation, hormone-mediated signaling pathway, cellular response to organic cyclic compound, regulation of immune system process, cellular response to organic cyclic compound, defense response to bacterium, defense response to fungus, response to ethylene, response to ethylene, defense response to bacterium, regulation of defense response, defense response to fungus, hormone-mediated signaling pathway, protein phosphorylation, phosphorylation, response to salicylic acid, cellular response to oxygen-containing compound, defense response to bacterium, phosphorylation, hormone-mediated signaling pathway, defense response to fungus
Cellular Component   is active in   plasma membrane
Molecular Function   enables   transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_30794.1
MDHAFQAIVAAIGSFFVVTLLLAGVIILCQQYRNSSKARTRAIQRSTRPAPARDASFSLAVVDASWSSDPNLIKITWEELAVATENFSPHLIVGDGSFGLVYKARLSTNALVAVKKLSPDAFQGFREFRAEMETLSKLNHPNIVRILGYWASGPERLLVYEFIEKGNLDQWLHEPDLSRSPLSWETRVNIIRGVAHGLSYLHGLEKPVIHRDIKASNILLDFKFQAHIADFGLARRMDKTHSHVSTQFAGTMGYMPPEYIEGSNVANPKVDVYSFGILMIETMSSHRPNLPMKLGQSDIGMVQWARTMKEQNAEMEMVDVNISREGLSEESVREYVRIACECTSQLQKERPSMPEVVEWLDSTPLKLFIPP*


CDS Sequence:
>Vu_30794.1
ATGGACCACGCTTTCCAAGCCATCGTCGCTGCCATAGGTAGCTTCTTCGTCGTCACGCTTCTCCTCGCCGGCGTCATCATCCTCTGCCAGCAGTACCGCAACTCCTCCAAAGCCCGCACCCGCGCCATTCAGAGATCAACTCGACCCGCCCCCGCCCGCGATGCCTCTTTTTCTCTAGCCGTTGTCGACGCCAGCTGGTCCTCCGACCCCAACCTCATCAAGATCACGTGGGAAGAGCTCGCCGTCGCCACCGAAAACTTCTCTCCGCACCTCATCGTCGGCGACGGCAGCTTCGGCCTCGTCTACAAGGCCCGCCTCTCCACCAACGCCCTCGTCGCCGTCAAGAAGCTCTCTCCTGACGCCTTCCAGGGTTTCCGCGAGTTCCGGGCGGAGATGGAAACCCTAAGCAAACTTAACCACCCAAACATCGTCAGAATCCTCGGGTACTGGGCCTCCGGCCCGGAACGCTTACTCGTCTATGAATTCATCGAAAAGGGAAACCTCGATCAGTGGCTCCACGAGCCCGATCTCTCCCGCTCCCCCCTGTCCTGGGAAACTCGAGTCAACATCATACGCGGCGTGGCCCATGGGCTTTCCTACCTCCACGGGCTCGAGAAGCCCGTCATTCATCGCGACATAAAGGCCAGCAACATCTTGCTGGACTTCAAGTTTCAGGCCCACATCGCTGATTTTGGGCTTGCCCGCAGGATGGATAAAACGCACTCCCACGTTTCGACGCAGTTCGCCGGCACTATGGGGTACATGCCGCCCGAGTACATTGAAGGGTCGAATGTGGCGAACCCGAAGGTGGATGTGTATAGTTTTGGGATTTTGATGATCGAGACGATGTCAAGTCACCGGCCCAATTTGCCAATGAAATTGGGCCAGAGTGACATTGGGATGGTCCAGTGGGCGAGGACGATGAAGGAGCAAAATGCGGAGATGGAGATGGTTGATGTGAATATTTCAAGAGAAGGGTTGAGTGAGGAAAGTGTGAGGGAGTATGTGCGCATCGCTTGTGAGTGCACCAGTCAATTGCAGAAGGAAAGACCATCAATGCCAGAAGTTGTAGAATGGTTGGATTCCACGCCTCTCAAACTTTTCATCCCACCATAA


Promoter Sequence:
>Vu_30794::LG8:41110369-41112369(-)
TCTCTGTAACTGGAAAGTAGTCTCAGACATTTTGACCATGTGAAATGAAAGGAGAATGAAGTTATTTCGTCTCCTCATGACTACCCATTGCAACATAAATGTCCTTTTAAGCGGAAGGATGCTATTCTATTTTTTCTCTTTACTGTTGTTTATGTCACTTGTTTTCAGTATGTGCATGACGAACTTCCATGTTAATAAATGATTGGGACGTTGTATATATTAGTGTATTTAAATTAAATTATAGGACTGAATATATTTTTGTATATGAAAATTTGGTGATAAATTATAATTTGTTATACGTTCGAAATTTTAATATATTTTAACTTTTAACTATAAAATAAATTAATACAATTTTTTTAATCAAATCATAATATTTTTTTAGATGTCAAATGAGTAAAAAAAATTAACGTAACAAAATTAAAAATATTTATTTTCAAAATTTAAAATCCAAAACTTATTAAAGTTTATGTTACAATTAAAACAAAATAACAAATTTTGATTTTGAATCAAAATTAAAAATTAAAAATATATTTAATAAGAAATAAAGAAGTCATTGCAATTGACGGAAATACTAGATCCACTAAAGAAACAAAAATGGAAGGAAAGTTTATGGGTACCTCGATTGACTATTTGTACTATATCTATTTTTATTTTTGTCGATTTTTATTCTTATTTTTATTAAAAAAGACAGTATATAATCACTAGAAATCCTATATCTTTATACTTAGTATATAGGAATTCTAGTGATTATAGCTAAGCCGATATATATCATTATATACCCTTTTCTTATTCTTAGTATTTTTTTATTATTCTTTTATTTTATTATTTTGATCCTGTATGTTTTTATTTTTTATTTCAATTCCATAATTTCTTTCATTTTTAGTCAAAGAAAAGAAATTATGGAATTGAAATAACCCGTGTTCGCTTCTGTGGATTTGCAAGGATGGATATGAATGGATTTGCAGGATACCCCTTAATACGGTCACTCGCATATATGCGAAGATTTGCATTGATTCACAATAAAATCTCTATTTTGCCCTTAACAGAGTTATGAAAATACCAGCAGGCATGAACAAGGAAAGGTTGAAGACGATTTAGGGGACTGCATAATCGGTTACAGAAAAATATTTTGGATGGAGTGTAATCGGTTACGGAAACTGCGTAACCGGTTACGCTGGGAAGTTATACGAATTGCCAAAGGTGTAATCGGTTATTCCAGCTTGAGCGTGGTTCAAAGACGGATTGGATGCGTTAATAAATAACATTTTATATTTATTTTATAAAGAGGGGTATTTTGGTAATTTATAATTTTTATCAATTAAATTAATTTTTAAAATCTATCACATCAATCAAATTCTACACTAATTACTTCCAAATTCACTCTCAGCCACCCACAAATCCACTCAAAAAAACAACAAAAAAAATTACCCTCAAATCCATTCAAATCATCACCTCTAAATATTTCCAAAAGAACAAAACCTTGGAGTTTGAATGGTTCCAATCCCAATGCAACAATCCAACCAACCCCGTTGGAATAAACATGTGAAATCACAATTTAGCATGAATACGAAACCAGATTTTCAATCCTCAAGGAAGTAAGTGCAGATAATGGGTGAAGAAGTTCAGTTGACGATTATAGATGAAGAAACATAATTCAAAACTGTGGCATAATAACAGAGTATAGATATTGAAGCTGAAAAGACAGCCATTTGATGTGAGAAACCCTTCTCCTTCCCTCTCTAAGGTCAACAGAGCCACTAATAATGAACCACTGAAGTCAACAAGAGCCAAAATTCACAGCAGAGGAGGAAAAAGTAAAAGAAAAGTGGGGTTAAAATGGAGTTCATGAGTTAAGCAAATCCGTTGACTGGTCTCCCATCAGCATTTCCACGAAATCACTATCACACTTCCTCTCCATTTTCCATTCCCTCTCCCTTAACCATTCATCTCTATCTCTCTCTCTCAAGATCACTCAGTCAATCAATCATTCCACCCCTCCC


Gene Sequence:
>Vu_30794(-)
ATGGACCACGCTTTCCAAGCCATCGTCGCTGCCATAGGTAGCTTCTTCGTCGTCACGCTTCTCCTCGCCGGCGTCATCATCCTCTGCCAGCAGTACCGCAACTCCTCCAAAGCCCGCACCCGCGCCATTCAGAGATCAACTCGACCCGCCCCCGCCCGCGATGCCTCTTTTTCTCTAGCCGTTGTCGACGCCAGCTGGTCCTCCGACCCCAACCTCATCAAGATCACGTGGGAAGAGCTCGCCGTCGCCACCGAAAACTTCTCTCCGCACCTCATCGTCGGCGACGGCAGCTTCGGCCTCGTCTACAAGGCCCGCCTCTCCACCAACGCCCTCGTCGCCGTCAAGAAGCTCTCTCCTGACGCCTTCCAGGGTTTCCGCGAGTTCCGGGCGGAGATGGAAACCCTAAGCAAACTTAACCACCCAAACATCGTCAGAATCCTCGGGTACTGGGCCTCCGGCCCGGAACGCTTACTCGTCTATGAATTCATCGAAAAGGGAAACCTCGATCAGTGGCTCCACGAGCCCGATCTCTCCCGCTCCCCCCTGTCCTGGGAAACTCGAGTCAACATCATACGCGGCGTGGCCCATGGGCTTTCCTACCTCCACGGGCTCGAGAAGCCCGTCATTCATCGCGACATAAAGGCCAGCAACATCTTGCTGGACTTCAAGTTTCAGGCCCACATCGCTGATTTTGGGCTTGCCCGCAGGATGGATAAAACGCACTCCCACGTTTCGACGCAGTTCGCCGGCACTATGGGGTACATGCCGCCCGAGTACATTGAAGGGTCGAATGTGGCGAACCCGAAGGTGGATGTGTATAGTTTTGGGATTTTGATGATCGAGACGATGTCAAGTCACCGGCCCAATTTGCCAATGAAATTGGGCCAGAGTGACATTGGGATGGTCCAGTGGGCGAGGACGATGAAGGAGCAAAATGCGGAGATGGAGATGGTTGATGTGAATATTTCAAGAGAAGGGTTGAGTGAGGAAAGTGTGAGGGAGTATGTGCGCATCGCTTGTGAGTGCACCAGTCAATTGCAGAAGGAAAGACCATCAATGCCAGAAGTTGTAGAATGGTTGGATTCCACGCCTCTCAAACTTTTCATCCCACCATAA

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