Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30656 LG8 39568090 39570027 PREDICTED: GATA transcription factor 8-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/A 39568161 missense_variant p.Asp24Glu
C/T 39568165 missense_variant p.Pro26Ser
A/G 39568195 missense_variant p.Thr36Ala
A/G 39568493 intron_variant
A/T 39568676 intron_variant
T/C 39568755 intron_variant
T/C 39568804 intron_variant
T/G 39568841 intron_variant
C/T 39568882 intron_variant
C/T 39568883 intron_variant
G/A 39568891 intron_variant
A/G 39569048 intron_variant
G/A 39569313 synonymous_variant p.Ser114Ser
C/T 39569316 synonymous_variant p.Cys115Cys
G/T 39569605 missense_variant p.Ala212Ser
A/T 39569609 missense_variant p.Glu213Val
G/T 39569757 synonymous_variant p.Thr262Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30656.1
MVGPNFMDEIDCGSFFDHIDDLLDFPVEEVEGITPTLPAAAAAGNCNSLASIWPAGADSFPGSDSVFSGNSASDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMKKVEEPSCITKEDSVHNQFHTSSPVSVLESSSSCSGGKTVPAPPRSPEVYIPVPCGRARSKRPRPATFNPRPAMNLISPASSFVGENIQPNVISPKTSSDSENFAESQLVAKMPKQVCGEPKKKKKVKVTVPAGGGDSNQNGLQAVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRFKSGRLYPEYRPAASPTFCPSLHSNSHKKVLEMRCRGIEKSGFAMNNAAASPELIPNTNSSLSLEYI*


CDS Sequence:
>Vu_30656.1
ATGGTTGGACCTAACTTCATGGATGAGATAGACTGCGGTAGCTTCTTTGACCACATCGACGACCTTCTCGATTTTCCTGTGGAGGAAGTTGAGGGAATCACCCCAACCTTGCCCGCCGCCGCCGCCGCCGGAAACTGCAACTCGTTGGCAAGCATCTGGCCCGCCGGGGCGGATTCGTTTCCCGGTTCTGACTCGGTGTTCTCCGGCAACAGCGCTTCGGACCTCTCCGCCGAGCTCTCAGTTCCGTATGAAGACATTGTGCAATTGGAATGGCTGTCGAACTTTGTGGAGGATTCGTTTTGTGGGGGGAGCTTGACCATGAAAAAAGTGGAAGAGCCATCGTGCATCACAAAGGAGGACTCAGTGCACAACCAATTCCACACATCAAGCCCAGTTTCTGTCCTTGAGAGCAGCAGTTCCTGCTCCGGGGGAAAGACGGTGCCGGCGCCGCCACGAAGCCCGGAGGTTTACATCCCTGTGCCATGTGGACGCGCACGCAGCAAGCGTCCACGTCCTGCCACCTTCAATCCTCGGCCAGCCATGAACCTCATTTCCCCTGCCTCGTCCTTTGTCGGGGAGAACATACAACCAAATGTAATTTCGCCGAAGACCTCTTCAGACTCTGAGAATTTTGCCGAGTCTCAACTTGTAGCAAAGATGCCAAAGCAAGTGTGTGGGGAGCCTAAGAAAAAGAAGAAAGTGAAGGTGACAGTTCCTGCAGGTGGCGGTGATAGCAATCAGAATGGATTGCAAGCGGTTAGGAAATGCATGCATTGTGAAATAACGAAGACACCACAGTGGAGAGCAGGGCCAATGGGGCCAAAAACACTGTGCAATGCATGTGGTGTTCGTTTCAAGTCTGGGAGGCTCTACCCGGAGTATCGCCCAGCTGCAAGCCCAACCTTTTGTCCATCTTTGCACTCGAATTCCCACAAGAAGGTGCTGGAAATGAGATGCAGGGGCATTGAGAAATCTGGTTTTGCGATGAATAATGCAGCTGCCTCTCCCGAACTCATTCCAAACACTAACAGCAGCCTTAGCCTGGAGTACATTTGA


Promoter Sequence:
>Vu_30656::LG8:39566090-39568090(+)
AACAGAAAAAGAGAGAGTTTATTGAGAAGAATTTCAAGAACTGTTTTTGTTGGTTTTGAGCTGAAAACAAAGAATTTTCTGTTTTTTATATATTCAAAGTTGGAATTTCCAAAACTCTTCCCACACTTGCACTATTCAAATTTGTCCTGCAAGTAATTCCATGGGAATTGTCTTTTTCTTATTTTTGAAAGAATAAAAATTTCCACAAACGCAAACTTACGATTTGTCAATCATACGGTGGCAGGAATTAGGTAAAATTCAAACTTGGTAAAAACGGTAATTAATGGAAAAAAGAAGGGGATAATAGTACTGTAGTAATTTATGTTTTGAGTGGCAACGCGTAATAAATATAATTAAAATAATAAATGAGGCTATCCAAAGTGACCATATCCAGCGTGGAATACAAAAGAATCATCGGTTTCCGAACCCGTAACAAACACTCGTACAGGTCGTAATAACGCTTTCAGTGTGTCTCACGCGCTTCGAGGAAGCTCCTAAACTCTGACTTTTCAGCTTTACTGCAAACCCACGCAGTAATTTTGTTTTGTTTTATTTAAGAAATCAGAGACTAAGCAGAAACAAACAGTGTTTGAAACACGGCGGTTAAAAAAAGGCTGACAAAACACAAGCTTCTCTTGTTCTATTTATGTAAAGCCTGCACCTTCTTGGTTTCTCACTTTTTTTCCTCTCTCCGAAAGGAAGCATTGCAATTGACAGAAACTGAGACCCAGCAGCGAAGAAGAAAAGGTAAAGAGCATGGTGTTGTTGTATTTAGTGGTTATTGAAAATGAAAAGGCATTTACGTTTGGTGTTAATTATTTTTGAAAATTTAGTTGGGGGGTGGTATGGGAAATGGGACTGGGTAGATGGATTGAAATTGAAACGAAGATGGTTTGTGTGGGGTGGGGTGGAAGTCCGTGAATGGAGGAAAGGAGAGAGAAGGGTGGGTGGGACCCATGGTTAATCTGAGGAGAGAGATGAATGGAAAAAGGAACAAGAGAGAAAGAAGTCTTCAACATCACGACAGTGGAGGTAGTAAAAGACAGCTAGCAATGATGAAGGAGCCTCACCTACCAGTGCCCATCACATTCTCTTTCTCTCTTCTTCTTCTCCCTTCTTCATAACCTCCTCTTTCCATTTAAGCCTTCTTCACTCTCCTCTCTCTCTTTCTCCTTTCAAAAACCCCAAACACCTCTCCACCCCCCTCACACACTTCTTCCTCCTTGCCTCCTCTGCTGTCCAGCTTTTCTACCTTTAAAGATTGCACCTTTTTCTTCAGTTTCATCTCAAACATACAAACATACCACTTTTACCCTTCAGGTTTGCTTTCTTTTCCTTCCCACCTTCTGATTTTCAACCTTACCATTCCAGGGAATTCAATTTCAACACTTCGCCTTTCTCTTAAACTGTTTTCAAACATTACGTGATTTTGTCTTTCCCTCTTGTTTATTTCGTTTTTTCTTTCTCTGCCTCAACTTGAATTCTCAACCTGCTCTTCAATTTTCCTTTGTTGAACGAGGTTAGCTTGCTGGCCTTCTTCAACTTTACCCCAATTTTCAAAATGTTCACATTCTGTTTAATTTGGAAAAAAGTGGTAGCCGAAATGAGGTTTCGTATCTTCGATTACTTCAAAGGAAATAGAAAATACAGAGTGAAGGTTTTTCTGGATAAAATCAAAATGCCATACTGGGAACAGCTCATACTAACATGCGCCGCAGCACTCATTGCACTCACATGCTAAAATCTTCAATTTCGGATTTTCATTTCATCAAAATAAGTAATTAATAATAACAACGCATGTCAGTTACCTTTTGTTAACTTTTTTTCCCTTTCTCTCTAATGATTCCAAAGAAAAATATTAATTTTGATTTACGCAACAATGGCTACAATGGGCCACTGTCTCCCCCATGTGATATTTTCTTTTCCATTTTCTCCTTTCACACTCTGATTTTCTATCCATTTTTGAATTTTCTCAGGGAATTTTCCACCTGCCGAGAAAA


Gene Sequence:
>Vu_30656(+)
ATGGTTGGACCTAACTTCATGGATGAGATAGACTGCGGTAGCTTCTTTGACCACATCGACGACCTTCTCGATTTTCCTGTGGAGGAAGTTGAGGGAATCACCCCAACCTTGCCCGCCGCCGCCGCCGCCGGAAACTGCAACTCGTTGGCAAGCATCTGGCCCGCCGGGGCGGATTCGTTTCCCGGTTCTGACTCGGTGTTCTCCGGCAACAGCGCTTCGGACCTCTCCGCCGAGCTCTCAGTTCCGGTTAGTTGTTAGAAAAAGCTGCAGTTTTTATCCAATTTGTTGTTTTGTTGAATTTTTTGGCGCGTTCACATGAATTCCGTGAACTGCTCTGTAATTATATGTCCTTGCGTCACTGGCTTCCCATGATGCCGTTGGATTACTTAGATTATGACATCACAGTTTCATGTACGGATCTGATTGTGTGTTTGCCGTTGCCAGCCTGACACCACGCGTATTTGATAGCATGAAATTTTGGTTCTAGTTGTGGGGAGCATTGTTAAGTGATTGTCTTCATTCCATAAATGGCGCATAATTTTTTTAAAAATAAAATCATAATTGGTAGACACTATAAAGATAATAAATTTCAAAATATCTAGACACTTGACGGAATAATATTTTTTTGTATATATAATTTAAATTTGAAATTTTTATAGTTTAAATTCTAGCTGGGGAGACATTATTAACTCACCATTATTATATTGTAATTTTTTAAAAAGTAATTTTAGTATTTTAAAATGACACTTAATTTTGTCGGTGACATGTGGCACAGCACATCCCCATACCTCTCCATTATTTGAACATCATTATTGGATATCATGTGATTTTGCATGTGACAATCACATGATGCAACAACAAAACACAAATAATTAGAAAAGTTGGTCACTCACTCTCTAGCTTTCCATGTTTGATGATACCCTTTTCACAGTGAGCACAAATTCGTATTCCTCATTCAATTTGAAGAGCTTGCATGTTGTTCTGTGGAATATGCTAAACATAGCACAACACGCTTTTAACGAATAGTAGTATTAATTGTATAAGAGAAAAGAAAAAAGATAGAGTAAATGCATTTGAATTTGACAAGGCAAAGATATGATTCTCATGAATGTGGTGATTGCATTGCAGTATGAAGACATTGTGCAATTGGAATGGCTGTCGAACTTTGTGGAGGATTCGTTTTGTGGGGGGAGCTTGACCATGAAAAAAGTGGAAGAGCCATCGTGCATCACAAAGGAGGACTCAGTGCACAACCAATTCCACACATCAAGCCCAGTTTCTGTCCTTGAGAGCAGCAGTTCCTGCTCCGGGGGAAAGACGGTGCCGGCGCCGCCACGAAGCCCGGAGGTTTACATCCCTGTGCCATGTGGACGCGCACGCAGCAAGCGTCCACGTCCTGCCACCTTCAATCCTCGGCCAGCCATGAACCTCATTTCCCCTGCCTCGTCCTTTGTCGGGGAGAACATACAACCAAATGTAATTTCGCCGAAGACCTCTTCAGACTCTGAGAATTTTGCCGAGTCTCAACTTGTAGCAAAGATGCCAAAGCAAGTGTGTGGGGAGCCTAAGAAAAAGAAGAAAGTGAAGGTGACAGTTCCTGCAGGTGGCGGTGATAGCAATCAGAATGGATTGCAAGCGGTTAGGAAATGCATGCATTGTGAAATAACGAAGACACCACAGTGGAGAGCAGGGCCAATGGGGCCAAAAACACTGTGCAATGCATGTGGTGTTCGTTTCAAGTCTGGGAGGCTCTACCCGGAGTATCGCCCAGCTGCAAGCCCAACCTTTTGTCCATCTTTGCACTCGAATTCCCACAAGAAGGTGCTGGAAATGAGATGCAGGGGCATTGAGAAATCTGGTTTTGCGATGAATAATGCAGCTGCCTCTCCCGAACTCATTCCAAACACTAACAGCAGCCTTAGCCTGGAGTACATTTGA