Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30598 LG8 38834603 38836606 PREDICTED: transcription factor bHLH30-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 38835071 splice_region_variant&intron_variant
G/A 38835109 intron_variant
G/T 38835245 intron_variant
C/A 38835331 intron_variant
T/C 38835595 intron_variant
A/T 38835687 intron_variant
A/G 38835901 intron_variant
G/A 38835943 intron_variant
A/T 38836009 intron_variant
G/T 38836353 missense_variant p.Pro85His
G/A 38836383 missense_variant p.Thr75Met
G/A 38836432 missense_variant p.His59Tyr
A/T 38836442 synonymous_variant p.Ser55Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30598.1
MIQEDQGQCSSQAINNYHQAYQDQLLLQQQMQQQNNDIFGGGGRGGLNMYPGEVSQIMHQPWSIPHNQVHHPFNTVREHDPFLVPPQPSPYATLFNRRGHSLQFAYDGSSSDHLRIISDTLGPVVQPGSAPFGLQTELAKMTAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEADELTVVDEADEDGRSVIKASLCCEDRSDLFPELIRTLKALRLRTLKAEITTLGGRVKNVLFITGEEEDSSSGSEDHNHQQQYCISSIQEALKAVMEKSVGDESASANIKRQRTNIISMS*


CDS Sequence:
>Vu_30598.1
ATGATACAGGAAGATCAAGGGCAGTGTTCTTCTCAAGCGATCAATAACTACCACCAGGCTTATCAAGACCAGCTTCTCCTTCAGCAACAGATGCAGCAACAAAACAATGATATCTTTGGTGGAGGAGGAAGAGGAGGGCTCAACATGTACCCTGGTGAAGTCTCTCAAATCATGCATCAGCCTTGGTCTATTCCTCATAATCAGGTTCATCACCCCTTCAACACGGTGAGAGAGCACGACCCTTTTCTTGTCCCTCCCCAACCTTCACCCTATGCAACTTTGTTCAACCGAAGGGGTCATTCTCTTCAGTTTGCATATGATGGTTCATCTTCTGACCATCTTAGGATCATATCAGACACCCTTGGACCGGTCGTTCAACCCGGTTCGGCACCCTTTGGCCTCCAAACCGAGTTGGCTAAGATGACTGCTCAGGAAATCATGGAGGCCAAGGCCCTTGCAGCTTCCAAGAGTCACAGTGAAGCCGAAAGGAGGCGCAGAGAGAGAATCAACAACCATCTTGCCAAGCTTCGCAGCTTGTTGCCTAGCACAACCAAAACAGATAAAGCATCATTGCTGGCAGAAGTGATTCAGCATGTGAAGGAGCTGAAGCGTCAAACCTCATTGATAGCAGAATCGAGTCCGGTTCCTACGGAGGCTGATGAGTTAACTGTGGTGGACGAAGCTGATGAAGATGGGAGGTCTGTGATCAAAGCCTCTTTGTGCTGTGAAGATAGGTCAGATCTGTTTCCTGAACTCATCAGGACCTTGAAAGCATTGAGGCTAAGAACCCTTAAAGCTGAGATCACAACGCTGGGAGGACGTGTGAAGAACGTGTTGTTCATCACTGGGGAAGAAGAAGACTCGAGCAGCGGCAGCGAGGACCACAACCACCAACAGCAGTACTGCATTAGCTCAATACAAGAAGCACTTAAGGCGGTGATGGAGAAGAGCGTGGGGGATGAGTCTGCTTCAGCAAATATTAAGAGACAAAGGACCAATATAATATCAATGTCCTAG


Promoter Sequence:
>Vu_30598::LG8:38836606-38838606(-)
ACTAAATCTTAAGTTTTTATTTAACATAGAGGAGTCTATATATCCTTGAATTATTTTGGGGGGAAAAGTAGTGTAAAACATATTTTAAAATCTCCTTGATAGTAGTTGAAGAAATATTTGTAATGCAATTTTTTTTTAAAGTCATACACAATGGTTTTTACTAACCATTGTACTAAATAAAATAGTTAAAGAATCATCAAATGATTTTTTAAAATATTGTGACATTCAATGAATTAAAAAATTGTATTGAGTCTATCTTTTTACAGCATATTGATAAGTGTATTAAGGACACTGATATATAATATTAGTTTTTATAAAAAAAAATTATGACTGAAATATATTGTAAAATTTAAATATTATATTTCTTAAATTTTTTTAAAACATTTATTAGAATTTGAATCTGTTTACTTGTAATTTATTTACCATTATCTTCAGTATATTGTTGTACAAAATTGATCTTTATTCATTTTCTTAATGACATGATTTGTTCATTGCCGATTTTTGATAAAAAAAAAACAATTAAGTCAATTAGTCGTTTCCTTTATTAATTATAAGACATGGCTTCTAATTTCGGGAGTTAAAAGGAAAAATCTTGAAAATATACACACTGACGCATTTCAAGATTCTTCACTTTCATTTTTTGTAATTATTTTAATGAGTGAGTAATTAATATAATTTAAAATTGTTATCTTGAACAAAATTAATTAGCAGTAAGACAGCACTGGAAGTAATATTAATGGATAAAGAGAACGGTTGGTTAAGCATGATGATAATATCAGTCTTTTTGGTCGTTGGTCGGTCGACAATCTGTGTAGTGTGCCTTCACTACGCTTTGCTTGTGTTTCCCGTCCCTATCTCTACCTCTTTCTCTCTCACATACATACCTACAAATATAATTACATGGTAATTTATAATAGAAAGAACATTAAATGAAATTTAGTATGTAAAGCGTCTTTAATAATTTCAGAAAATATAAAAGCATGTCTATGTAAAATGATAAAGGAAAGTACAGACATAAATAGGTGTGGATGGTTACATACATACATACATGTATAGGTATGATAGAGAGAGCCGTAAGAAGAAAGGAAAGTGAAGTAGCAGCACTAAACAGTTTCTGTATATGATAGAGGGTGTTGGTGCGCAGAAGGCTGCAAGATTAGAACCGAAAAAAAAAACAAAGAAACCAAAAAGAGAGAAACAAAGCACGAAGGAAAAGGAAAGTTTTGTTGAATGTAAAAGGATGGTAACCTTGCCCCGCACAAAGGTTTGTGGCAGAAAAACACTACTAAGTGAAAGAGATTTGACATTGAGGCAGAAAGAGAAATCCAAAGCATTTGGACTTTTCTTTCACCGCCCACCACCACAAGAGAAAGAAAGAAACAACCAAAGTAACTCATTCATCCCAGCATCATACAATTATAAACCACAATTGTATAATCAGAAATCACACTGCACAGGGTATTAAGCTCTCTTTTTCTCTCTCTTTTATTTTTCCTTCTACCAATATTTTTATAATATTATTGGTTTTTATATTTATTTTATTTGTACACATCATTCACCATGCTTACTATTCTCTTTCCTTTTTCCACATTTCTGTCTTTTATCTCAAAGTATATACTCATGATGGTAACGGGTGTGAAAAAAGGCCCCCCGTTTTTTTCAACCCACGTTGTCCCTTGAAATACCCTTTTCATTTTTATTCCTTGTGCAAGTGTAAAGCAAACTTCTCCCAACTCTTTATTCTTCCAAATCAAACCTCCTTTTTCTTACTCACATCAGACAAAACAAAACAAAAATCAGTAGAGCATACAAATACAAAACCAAAACAAACCCACCTCAGCTTCTGACATTTGAATCTCCATTTTTTTTTCTTTCTTTTAATTTTTAATTCTCCTCTCCAGCAAAATATTGTTATATATAAAGCCTTGGAGTTTGTATTATCCTTCAATAGAGTTCCATATAAAACAGGAGGCAACAGCGGCTGTAGAGTAGCTAGGGAA


Gene Sequence:
>Vu_30598(-)
ATGATACAGGAAGATCAAGGGCAGTGTTCTTCTCAAGCGATCAATAACTACCACCAGGCTTATCAAGACCAGCTTCTCCTTCAGCAACAGATGCAGCAACAAAACAATGATATCTTTGGTGGAGGAGGAAGAGGAGGGCTCAACATGTACCCTGGTGAAGTCTCTCAAATCATGCATCAGCCTTGGTCTATTCCTCATAATCAGGTTCATCACCCCTTCAACACGGTGAGAGAGCACGACCCTTTTCTTGTCCCTCCCCAACCTTCACCCTATGCAACTTTGTTCAACCGAAGGGGTCATTCTCTTCAGTTTGCATATGATGGTTCATCTTCTGACCATCTTAGGATCATATCAGACACCCTTGGACCGGTCGTTCAACCCGGTTCGGCACCCTTTGGCCTCCAAACCGAGTTGGCTAAGATGACTGCTCAGGAAATCATGGAGGCCAAGGCCCTTGCAGCTTCCAAGAGTCACAGTGAAGCCGAAAGGAGGCGCAGAGAGAGAATCAACAACCATCTTGCCAAGCTTCGCAGCTTGTTGCCTAGCACAACCAAAGTGAGTCTGATTAATTGATTTTCCAGATTAATATTCATTGATTAAAACGAATTCACGTATCATGAATAGTGAATTACTTAAAAAGTGTGCATGTGTAATTATTCATCTCAACAAAAATCCAAGATCTAAATCTCATGTTGTTCCCACTCGTGCCTTATAAGAACATATGTTCGTATAAACAATAGTGCAAGATTGTGTTTTTTCTTTATGGACTTTTTCTTTTCAAAGAGTGGTTTGTAAATCTTTGCAAGATTCTATTTATTACTTTGGCATAGTAAGTAAAACAACAAAATCAAAATATCATAACCTTTTAGAAAATGAGGTGCAAAAAATGCTATTGGGTTGTTTTTGCCTGCTTTTTTTTTGCCAGTTGATTGGCTTTGTTAGTTGTTTAATTTGTTTTCATGATATTCTACTTTCTCCTTTTCGGCTTAATTTCTTCACACTAATGACTTTAATTATGTATGTGTGTTCGGAGAGTAGTCTCTGTGGGAGTGGTAGTTCCGAGGAACAGCTAGAAAAAGTACTAGTAATAAAAGAGATGAGAGAAAAGTGTATTAGCGTTAATGTCGCTTGGTTGGCATGATAAAGAGGAACCAACTAGCAGTGGAAAAGCTTGGCATGGAAATTTCTTGCCGGATGATGTTGATCAGTCAAACTCAGTTTGAGAATGAAAAGAATAAAGCCAGAGACAAACTAGCACCCTTGTCAGTCACAAACGCACACACTATCTATTCTATATACCCCTTTCTATATTTCATCTTCTCTATCATATGCTGCATGACACTTCCACCATTCAAAGATACCCACTATTTACATTTCACAATCATCACGCCATTACCTACCAACCTCATAACCTCACATAACAACATCTCCGAAGCCCCACCATTTGTTTTGGCACCATGATATTGTACAATTAATTTCAGTGCTTTATTGTCATATCCGTAACATAAATTTCTTTTTGTTTTGTTGTGTTCTTTCTTGTAGACAGATAAAGCATCATTGCTGGCAGAAGTGATTCAGCATGTGAAGGAGCTGAAGCGTCAAACCTCATTGATAGCAGAATCGAGTCCGGTTCCTACGGAGGCTGATGAGTTAACTGTGGTGGACGAAGCTGATGAAGATGGGAGGTCTGTGATCAAAGCCTCTTTGTGCTGTGAAGATAGGTCAGATCTGTTTCCTGAACTCATCAGGACCTTGAAAGCATTGAGGCTAAGAACCCTTAAAGCTGAGATCACAACGCTGGGAGGACGTGTGAAGAACGTGTTGTTCATCACTGGGGAAGAAGAAGACTCGAGCAGCGGCAGCGAGGACCACAACCACCAACAGCAGTACTGCATTAGCTCAATACAAGAAGCACTTAAGGCGGTGATGGAGAAGAGCGTGGGGGATGAGTCTGCTTCAGCAAATATTAAGAGACAAAGGACCAATATAATATCAATGTCCTAG