Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30591 LG8 38735070 38736143 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to hypoxia, negative regulation of transcription, DNA-templated, cellular response to hypoxia, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, cellular response to hypoxia, cellular response to hypoxia, negative regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 38735145 synonymous_variant p.Tyr245Tyr
G/A 38735547 synonymous_variant p.Ser111Ser
A/G 38735683 missense_variant p.Val66Ala
G/C 38735828 intron_variant
C/T 38736060 synonymous_variant p.Leu28Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30591.1
MDAATSTDETTTTSESLSLPPNQSPPPLIRIEPDAVSGEAESRKLPSSKYKGVSTRGGRRRRDAEVASCGAYDVKAREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLSSGSGSGVSPRTVAAAAAKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNNLRAGDAVRFFKSTGPDRQLYIDCKARSGGGICEFNNNNAGGLFVPVGPVVEPVQMVRLFGVNLLKLPGSDGVRVGYEGKRKEMELFAFECSKKLKVIGAL*


CDS Sequence:
>Vu_30591.1
ATGGACGCTGCCACTTCCACGGACGAAACCACCACCACCAGCGAATCTCTTTCCCTTCCTCCCAACCAATCTCCGCCTCCTCTGATCCGCATCGAACCCGACGCTGTTTCCGGCGAGGCCGAATCCCGCAAACTTCCGTCCTCCAAATACAAAGGCGTGAGCACACGCGGCGGAAGGCGACGCCGCGACGCCGAGGTCGCCTCGTGCGGCGCGTACGATGTGAAGGCGCGTGAGCAGCTGTTCGAGAAAACAGTCACTCCCAGCGACGTCGGCAAGCTGAATAGATTGGTTATACCGAAGCAGCACGCGGAGAAGCACTTCCCGTTGAGCAGCGGATCCGGTAGCGGAGTCTCGCCGCGCACTGTTGCAGCGGCGGCGGCCAAGGGAGTGCTGTTGAACTTCGAGGACGTTGGAGGGAAAGTGTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAGAGCTACGTGCTTACCAAGGGATGGAGCCGGTTTGTGAAGGATAACAATCTGAGAGCCGGTGACGCGGTTCGGTTTTTCAAGTCAACCGGACCGGACCGGCAGCTTTATATAGACTGCAAGGCCAGGAGCGGTGGCGGTATTTGTGAGTTTAATAACAATAATGCTGGAGGTTTGTTTGTCCCGGTGGGACCAGTTGTTGAGCCGGTTCAGATGGTTCGGCTTTTCGGGGTGAACCTTTTGAAACTACCCGGTTCGGACGGTGTCCGGGTTGGCTACGAGGGGAAGCGGAAAGAGATGGAACTGTTTGCATTCGAATGTAGCAAGAAGTTAAAAGTAATTGGAGCTTTGTAA


Promoter Sequence:
>Vu_30591::LG8:38736143-38738143(-)
ACTGGGGTAGCAGGAGAAAAGCTAAGGGGGGATGAACTTCAGAGAATGAAGGTCCACTCTCCTGGTGAACCCCATCATCTTTCTAATATCAACTTCACCAACTCATGGTCCACACCCTCTTACTGTGGGTCCTGCCTCACATACACTACCCACACCTCAACCCCATATACACCACAAATTTTCATAATCTTACCAAATACCTCTTTTTCTTTAAATATACCCTTCATCCATTTCCCTTTTATTACCTCTTCTCTAAATTCTACTTTTAATTCTATAATCACCCAATGCTATAAATTTTCTTATCCTTCACCCCATCAAAAACAACCTCACAAAATGTTGGATGTAGACAAAATTATTGTCATAAAGGGACTCCGGCGGGTTTCAAATGGAAATGCCATTTTAGGTCATTTTTTCTTGTTATATAAATTTTAGTTCGGCATGTGTAATTTGGCCGCGTACTATTTATTATTCCGTACCGCTTACTCATTGGGAATAAGCCTTTGACTCCTATTTTCTTTATTTGCTTCTAAATTAAAAACCATATCATAGTTTTGATTACTTTATTTAAGTAATTATTCTGCACTGGAATGTGTTTTATTTATGCTTAAATGTTTTTGTTACTGCTTAAAATAAGTGAATATTAATATTGTAAAATCGCATCTAAATATAAAAACTTAATAGTTACTGTCATGAATGATTCCGAAACCTCCCACTTTATTTACACATAGAGCATTGACTGTGCTTTTGTATTCAAGACATCAAAAACATTTTTTTTTCTTACAATATTAATGATTTGAACAAGGAAATAACACTGCTTTATATTTATTATTTATAATATTTTAAAAATCGAAGGGTTGATTAAGAACACGTTGACACCTACCTCCTTACAATATTTTCTTACTAATAATTTTTAAAAATATAAAATCATGAGTAAAAGTCATTAAACAAAAATTAATATTGATTTTTTTGTGTGTGTTTGACTTCCAATCATCATTGTCTGTTAGAAACTACATGCATTGCAAGCGTTTGCTTTTTTTAATAAAGATTTTATTCCCTACTTTTATGATCTCACAAAAACCTTCAAAAGTTCACTTAAAATTGAAGTAATTGTAGAAAGAAGAGAAAAAATTTATAAAAATGAATATTCTTTAAAAAATCTTTTCAGAAGAAAATCTTCTCTGGTTTTTAAATAAACATGTTTCATTTGTTTAATAGGTGGACAATTTATTCCGTAAACCGGATGGGAGAAGAATATCTATTTTTGTAATTTTAAATCAGATGTTATCTTTGATCAAGGTTAATATACTTTTTTAAGTGTTAATTATTATATTAACCGTGTGCGTATATAATTGTAATTTTGAAAAGGCTAGAATTGCAAAAGAATTCTTAAAAATTTAAATATCACAAAATTAATATTATTAGTCAGTGAATAAATTGTTCATATATAAAGAAAATAGCAGCATGATGTGTAATATGAATTTGAAAGAGAAATAAAATAATAAAACATTATTTAGAAAGAAGATGAAAAAAAGTGGAGGAATTGTATTTATCATTATATAATTTTATGAGTGTGATATAAATTACCTGCATATGAAATGCAGTGATTTTCTAGTGTAATCTTATCTCTCTCTCTCTCTCTTTCTCCATCGATGAATTTTTCTCCTTCTCCAATGGTTGACCCACCCACACCACATATCATGCATTCCTCCATATCAAATTCATTGAAATTAAATTAGTAATTGGGGATGATGCCTAAATCATCCCAACCTCCTTACATTACATGTTCCAATAAATAACACTGCCTCACCTTCCTAGTTCCTCCTCTTTCTATATATAATATCCAACCTCAAACCAAATCATACCTATTCTCCAGTTTCTTCTACTCCCACACACTGCTTCATCCTACACTACATTAAGCACTCAAATAACTAAACCAAACCAAAACTATTTCCTTCACTCACTCCACACACAACCAAATTCATAACGGTTACAAACGCAAA


Gene Sequence:
>Vu_30591(-)
ATGGACGCTGCCACTTCCACGGACGAAACCACCACCACCAGCGAATCTCTTTCCCTTCCTCCCAACCAATCTCCGCCTCCTCTGATCCGCATCGAACCCGACGCTGTTTCCGGCGAGGCCGAATCCCGCAAACTTCCGTCCTCCAAATACAAAGGCGTGGTGCCGCAACCCAACGGTCGTTGGGGCGCTCAGATTTACGAGAAGCACCAGCGCGTTTGGCTCGGTACCTTCAACGAGGAAGATGAAGCCGCCAGAGCCTACGACATCGCGGCGCAGAGGTTCCGCGGGCGCGACGCCGTCACAAACTTCAAGCCTCTTGCCGGAGCAGGCGACGACGCAGAGTCCGAGTTCCTTAACTCGCATTCCAAGTCCGAGATCGTCGACATGCTGCGCAAACACACCTACGACGACGAGCTCCAGCAGAGCACACGCGGCGGAAGGCGACGCCGCGACGCCGAGGTCGCCTCGTGCGGCGCGTACGATGTGAAGGCGCGTGAGCAGCTGTTCGAGAAAACAGTCACTCCCAGCGACGTCGGCAAGCTGAATAGATTGGTTATACCGAAGCAGCACGCGGAGAAGCACTTCCCGTTGAGCAGCGGATCCGGTAGCGGAGTCTCGCCGCGCACTGTTGCAGCGGCGGCGGCCAAGGGAGTGCTGTTGAACTTCGAGGACGTTGGAGGGAAAGTGTGGCGGTTCCGTTACTCGTATTGGAATAGTAGCCAGAGCTACGTGCTTACCAAGGGATGGAGCCGGTTTGTGAAGGATAACAATCTGAGAGCCGGTGACGCGGTTCGGTTTTTCAAGTCAACCGGACCGGACCGGCAGCTTTATATAGACTGCAAGGCCAGGAGCGGTGGCGGTATTTGTGAGTTTAATAACAATAATGCTGGAGGTTTGTTTGTCCCGGTGGGACCAGTTGTTGAGCCGGTTCAGATGGTTCGGCTTTTCGGGGTGAACCTTTTGAAACTACCCGGTTCGGACGGTGTCCGGGTTGGCTACGAGGGGAAGCGGAAAGAGATGGAACTGTTTGCATTCGAATGTAGCAAGAAGTTAAAAGTAATTGGAGCTTTGTAA