Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30590 LG8 38721985 38723342 PREDICTED: zinc finger protein WIP6-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 38722104 synonymous_variant p.Leu40Leu
C/G 38722149 synonymous_variant p.Arg55Arg
G/A 38722330 missense_variant p.Ala116Thr
A/G 38722332 synonymous_variant p.Ala116Ala
C/T 38722424 downstream_gene_variant
A/T 38722432 downstream_gene_variant
A/T 38722435 downstream_gene_variant
A/T 38722438 downstream_gene_variant
G/C 38722449 downstream_gene_variant
G/A 38722450 downstream_gene_variant
G/T 38722553 downstream_gene_variant
T/A 38722588 downstream_gene_variant
A/T 38722642 downstream_gene_variant
G/A 38722650 downstream_gene_variant
T/A 38722747 downstream_gene_variant
C/T 38722748 downstream_gene_variant
T/A 38722773 intron_variant
G/A 38722851 intron_variant
A/T 38722868 intron_variant
C/T 38723096 synonymous_variant p.His188His
G/C 38723108 missense_variant p.Lys192Asn
C/T 38723221 missense_variant p.Ser230Phe
G/C,T 38723250 missense_variant p.Asp240His
T/C 38723261 synonymous_variant p.Arg243Arg
G/A 38723327 missense_variant p.Met265Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30590.1
MNHISMQKTYSFSCISSCGSDSACVEADEVGNEDSISLSLGLPCHHRSEVLNPKRTSAVRGHQKNPTSDDPSGVTVALHIGLPTTATKTSSTPTHVRYWIPTTQQILIGPTQFSCAVCNKTFTRFNNMQMHMWGHGSEYRKGSESLRGSKAGSSMLRLPCYCCEEGCRNNINYPRSRPLKDFRTLQTHYKRKHGGKPFECRKCKKAFAVRGDWRTHEKNCGRLWFCICGSDFKHKRSLKDHVRAFGNGHAPHSLGEERGSDESEMVFLV*


CDS Sequence:
>Vu_30590.1
ATGAACCATATCTCCATGCAGAAAACATACTCTTTCTCCTGCATATCCTCGTGTGGCAGTGATAGTGCCTGCGTAGAAGCTGACGAGGTTGGCAATGAAGATTCTATTTCCCTCTCCCTCGGCCTTCCTTGCCACCACAGATCTGAAGTCCTTAACCCAAAACGCACTTCTGCTGTGCGTGGTCATCAGAAAAACCCTACCTCTGATGACCCCAGTGGTGTAACAGTTGCCCTCCACATCGGCCTTCCCACAACCGCTACCAAAACTTCTTCCACTCCGACTCATGTCCGATATTGGATCCCTACTACTCAACAAATCCTTATTGGACCCACTCAATTCTCTTGCGCAGTCTGCAACAAAACGTTCACCCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGATCAGAGTATAGGAAAGGGTCGGAGTCATTGAGAGGGTCAAAAGCAGGTTCTTCAATGCTGAGGCTGCCCTGCTACTGCTGTGAAGAGGGTTGCAGAAACAACATAAACTATCCAAGGTCAAGGCCACTGAAGGATTTCAGGACCCTCCAAACACACTACAAGAGGAAGCACGGAGGGAAGCCATTCGAGTGCAGGAAATGTAAGAAGGCATTTGCAGTGAGAGGTGATTGGAGAACACACGAGAAGAATTGTGGGAGGCTTTGGTTCTGCATCTGTGGTTCTGATTTCAAGCACAAGCGGTCCCTGAAAGACCATGTCCGTGCATTTGGCAATGGGCATGCTCCACACAGCTTGGGTGAAGAAAGAGGCAGTGATGAGAGTGAAATGGTGTTTTTAGTTTGA


Promoter Sequence:
>Vu_30590::LG8:38719985-38721985(+)
GTAGATCGGCAAAATTGGAACTTCCACCTGACCCTTTCGCCACCTTTTTTAGTTGTGGTGGATCACCCCTGAATTAATGAACCCAATGTCAATCCTCCATTCATGAGATGCTTCAACAGTTACACAAAGATTCCAAGTTTTAGGGCTATGTCCAATCAACCACAGGGCCCTACCACCACCCCCTTTTTTTTCAGCCCATCAATGCTTCACTCTCTCAATTTTCTCCACCTTCCAAGCATGGAATGGAAGAACGTACTACACTGTTCACCACATTCACCATTTTATCCTCAAAATTATGTTTATCCACGCCATGCATGCACCTATGCACACAAATTATGATCACCATTTACATTTAAATGAATATCATTAAGATGGTGTACACATGCAGTAAAGATTTGATACTGGTAGGAATCGGAATAGTGAAAAGTTGAAAGAGTCGAGTTTCATTACATGCAGTACTTTTACATCGCCATCACAATCTCTTTGGTAATAACTAAGTGGGAGAGAGGAACACACGCCTCTCCTTCTACAGTTCTCCATGTCTACTTGCTCTGTTCATATTACCACTCTCACTTATAGTTTTGTGTGTTTACTGTCTCAGTCTGATATGGAAAGAGACTGTACCATCGCACACTCACTCTCACTTTTCGGTCTCTGTGTCTCTGCAGATGAATTGCTTATAAAAAAGAGAGAGAAAGTTGATTAAACATGCCGAAAGAAGACCAATGAATCATACAGATGCTATGCTACCCAAGAAAAAATTGTCATCATGTCCAAACAAATATAAAGCTTTTTCTACAGTTAACTTTTAACTCAATAATTGAATGACTTACACACACCATCAATGGTGGTATTAAAATTCTTAATTTTTTTTAAATATTTTTCAGATTCAATAAACATTGGCCGAGAAATATTCTTTCTTTATAATTTTTTAAAACCTTTTTTAAGCAACTAAGAAAGGGGTGACAAGAAAATTTGCCATGTATTGATTTGGTAATTGATGCAGAGTGCATGAGGAGGGAGAGATGAAAATCAATATTGAACTGAGAGGTTGTTCCATTATTATATGATATACTTTTGCTTTATCTCTAATGCGATTTTTCAACCGTGACAGAGGCACTGTGAGCAGCAATCTAGTAGATTCCTTTGCAGTTTGATGTCAAACCCTTTTGCGTGTTTAACATTATTACTGTGTAAAACTTTATTATTATAATCTTTTAATTATGATGAAAACAGCAATTAATGAGTTAGTTTTAATTATGTGAGGTCGGGTGATACAAAGACAGATGGTAACTGTAAGTGATACCGTGAAAGAAAATTAACTTGCACATGCGTCCGTGACTCCTGAAATTAAATTTGTACCCAAACACTATTTCAGTTCACTATTCTATGCTTTGCCTCCTCCTACTCTGTTCTCCCTTTCCTTCTTCTGTCTCTACTCCATTTCCAAACATGTCAAGATCCACATTTCCTTATCATCCTTATACTTTCCTTCATTCCACGTGCGCCTACACACGCCACACGTGCCTCCTCATGCTTCTACTCTACCTTCCTCCTTTCTCTATTCTACCGACCACACTATAACTTCCAAACAAAATCAAAAGCTATTTCAAATCTCAGCCAACTTCTTTCTTTCATGTCATTTTATTTTCTATTTGTATTTTTTTGTCTGTTCATAAAAACCACCGTTAGATAGAAAAACAACCACACAAAACTCTTTTTACTGTTTTTTAACCGATAGGTATCTTAATGGTACTGATTACTCTAAACTTAAGTAAAATAATGTAATAAGAAAAGAAAATTGGGTTGAATTTCGTTCAATCATTATTAATTAACAAATAAAAGCAAAACACAGACGCATACAAAATTTGTTTATTTATGGCCTTTTCTTGTCCCTTCACTTACAATTTCTGAATAGAAAACTCAACCCTTTCCCTCACTTCTTTCTCTCTCTCTCTCTCTTTCTCGTCTTATAATATTATCTCCATTGTCCATATCCA


Gene Sequence:
>Vu_30590(+)
ATGAACCATATCTCCATGCAGAAAACATACTCTTTCTCCTGCATATCCTCGTGTGGCAGTGATAGTGCCTGCGTAGAAGCTGACGAGGTTGGCAATGAAGATTCTATTTCCCTCTCCCTCGGCCTTCCTTGCCACCACAGATCTGAAGTCCTTAACCCAAAACGCACTTCTGCTGTGCGTGGTCATCAGAAAAACCCTACCTCTGATGACCCCAGTGGTGTAACAGTTGCCCTCCACATCGGCCTTCCCACAACCGCTACCAAAACTTCTTCCACTCCGACTCATGTCCGATATTGGATCCCTACTACTCAACAAATCCTTATTGGACCCACTCAATTCTCTTGCGCAGTCTGCAACAAAACGTTCACCCGTTTCAACAACATGCAGGTCAGTCCGTAACAGCTCAAACTGAACTATTTTTCTAAATTCATGCTAGCCACTTATTAAACTAAGATTAATAATCTGGAAATAGTACTTTCCCATCGTTAAAGTCTTACATATATATATATATATATATATACGAACACTGCAGAGGCCTTTAGACCCTCTTGCTAATAAAATACACGCAGTAAGAAAGTTAAACCCTTGCTTTTCTGTTGAAAGTGGAATTTAAAATCATGTCATTTGAAAAATCCAAGATGTCTTTCGTTGCATATCAACCACCAGCATTCAAGCTAGATAGAAGTTGTAACAGTGTTAGTTAATTAGCGTAAAAGTTGGAGTAATTATCATACGAACTTACGATTAAATAACATTAAAAAATCTTTAAATTTTCCGTGTCCAGTGTCTTTATATATATTATATTTTAAAAATTCACCCAATGCAAAGCAGAACTGGTTTGTTTTGCTGCGTGTTATTTTGGTCTCGAGAAAGACTTATTCTTATATATTAACATTATGATGTAACTAATATGAGATGAAGTGGTGTAAATATAGATGCATATGTGGGGACATGGATCAGAGTATAGGAAAGGGTCGGAGTCATTGAGAGGGTCAAAAGCAGGTTCTTCAATGCTGAGGCTGCCCTGCTACTGCTGTGAAGAGGGTTGCAGAAACAACATAAACTATCCAAGGTCAAGGCCACTGAAGGATTTCAGGACCCTCCAAACACACTACAAGAGGAAGCACGGAGGGAAGCCATTCGAGTGCAGGAAATGTAAGAAGGCATTTGCAGTGAGAGGTGATTGGAGAACACACGAGAAGAATTGTGGGAGGCTTTGGTTCTGCATCTGTGGTTCTGATTTCAAGCACAAGCGGTCCCTGAAAGACCATGTCCGTGCATTTGGCAATGGGCATGCTCCACACAGCTTGGGTGAAGAAAGAGGCAGTGATGAGAGTGAAATGGTGTTTTTAGTTTGA