Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30569 LG8 38524985 38527750 trihelix transcription factor PTL
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 38525137 missense_variant p.Ile15Met
C/T 38525340 missense_variant p.Pro83Leu
G/A 38525764 intron_variant
G/A 38526107 intron_variant
C/T 38526139 intron_variant
A/G 38526204 intron_variant
T/G 38526211 intron_variant
G/T 38526244 intron_variant
G/A 38526307 intron_variant
A/T 38526315 intron_variant
C/T 38526333 intron_variant
T/C 38526409 synonymous_variant p.Tyr158Tyr
G/T 38526475 missense_variant p.Lys180Asn
A/C 38526483 missense_variant p.Lys183Thr
A/G 38526491 missense_variant p.Arg186Gly
A/G 38526557 missense_variant p.Thr208Ala
T/G 38526608 missense_variant p.Ser225Ala
G/T 38526610 synonymous_variant p.Ser225Ser
A/G 38526632 missense_variant p.Thr233Ala
A/T 38527042 synonymous_variant p.Ala369Ala
T/C 38527048 synonymous_variant p.Val371Val
G/A 38527061 missense_variant p.Ala376Thr
G/A 38527132 synonymous_variant p.Val399Val
T/A 38527135 synonymous_variant p.Val400Val
G/T 38527679 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30569.1
MGDPYGLPEDLRRFIPPRTHMNPSSTHLLEPLCLHHGLSPVAAATTIPPNTYDHNMVGDVFFPRAFTHFAHHHDYSSSSGVNPTNAATAAVSDHAFCSMESAEKGWFGFDSGNNRWPRQETLSLLEIRSRLDCKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGDQANTNHASTSDKTHRAGANNSNIQTPTFTINQEHNGDSGNNPKCSESISISNSSEFETSSSENNEEDLSAIAFMMRQSREKQKALLDERQSDQRRLRKSWRAKVEEIVDSHMRKIIETQDAWMERMLSVVEQREQEMSSKEEERKRKESMWFDQQVHELWAKEKAWVEARDAALIEVVRKHVGIELEAMPLDEAVVEEAGNKNKGQGKIESSEFPSEGVDQRSSSRWTEMEISNLIQLRSGFEQRFRENGYLENGLWDEISAKLGCLGFDRSGSECKQIWDEISISLRRTVDECDGGKRRPWYLGLKVTDDDDL*


CDS Sequence:
>Vu_30569.1
ATGGGTGACCCATATGGGTTGCCGGAGGATCTCCGGCGTTTTATACCACCCAGAACCCATATGAACCCTTCAAGCACGCACCTACTTGAGCCACTGTGTCTTCACCATGGTCTCAGTCCGGTTGCTGCTGCCACTACAATTCCACCCAACACCTATGACCACAACATGGTTGGGGACGTTTTCTTCCCTCGTGCCTTCACTCACTTTGCCCATCATCATGACTATTCCTCTTCTTCTGGTGTCAACCCTACCAATGCTGCCACTGCTGCTGTCTCGGATCATGCATTCTGCAGCATGGAGAGTGCAGAGAAAGGGTGGTTCGGTTTTGATTCCGGGAACAACAGGTGGCCAAGACAGGAGACCCTTTCGCTTCTAGAGATCAGATCTCGTCTTGATTGCAAGTTCAGAGAGAATAATCAGAAAGCACCCTTGTGGAATGAGATTTCTAGGATAATGGCTGAGGAATTTGGGTATCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACGAAGGAAGGTAAAGCCAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTTGAAGCAATATGTGGAGACCAAGCAAACACAAATCATGCCTCAACTTCAGATAAAACCCATCGTGCTGGTGCAAACAATTCGAACATTCAAACACCTACCTTCACAATTAACCAAGAACACAATGGGGATTCTGGTAATAACCCCAAGTGCTCAGAGAGCATCAGCATCTCAAACTCATCTGAATTCGAGACATCCTCGTCTGAAAACAACGAGGAGGATCTTTCAGCCATTGCATTCATGATGAGGCAGTCAAGGGAGAAGCAGAAAGCGTTGTTGGATGAAAGACAAAGTGATCAGAGGAGGTTAAGAAAAAGCTGGAGAGCAAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATCATAGAGACTCAAGATGCTTGGATGGAGAGAATGCTGAGCGTTGTTGAACAAAGAGAGCAAGAGATGTCATCTAAGGAGGAAGAAAGGAAGAGGAAAGAGTCAATGTGGTTTGACCAACAGGTGCATGAACTGTGGGCTAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCATTGATAGAGGTTGTGAGGAAACACGTTGGGATAGAACTGGAAGCAATGCCCCTGGATGAAGCTGTGGTTGAAGAAGCAGGAAATAAGAACAAGGGCCAAGGAAAGATTGAGAGCAGTGAATTTCCGTCGGAGGGTGTGGATCAAAGAAGTAGCAGTAGGTGGACAGAAATGGAGATTTCAAATTTGATACAGCTAAGGAGTGGTTTTGAGCAACGATTCAGAGAAAATGGGTACTTGGAGAATGGGCTTTGGGATGAAATATCAGCAAAACTGGGTTGTTTGGGATTTGATAGGAGTGGAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTGAGAAGGACAGTGGATGAGTGTGATGGTGGGAAAAGAAGGCCTTGGTATTTGGGACTTAAGGTGACGGATGATGATGATCTTTGA


Promoter Sequence:
>Vu_30569::LG8:38522985-38524985(+)
ATAATGTTTTGATTTAATAATGTAATATTTTATCATTAATATTTTTGGAGGTTTTTAGTTGTTAGATTTTGTTTAATTTTAATGAAGACTTTTATTAAATAATTTCTACAAGATGAAATCTTCCCAAAATTAGGTAATGAAAATATCTCTAATTTATATATATAACCCACGTTATGGTTCAATTATTATTTTTTATTAAAAAGGTTAACAAATGACATATCTAAAATGTCGACAATTGAAAATCTAACAACTAAACAAAATGGTATAAAAATTAAGAAAATTAAAATTTCTATTATCCTGTTCTTCTTTCTGGGTTTTTTATTTATTAAAACCATGCAATGAGTGTTAATAATGATATCTGCATATTCCAAAGAAGGATTTAACTATTCTAAAATTACAATTTTAGATTATGCATCAAGTATGATGATTATTATTAGAACTTATAATAAATATAAATAATTTGAATTATATATTATTGTTATTATTATCAAATTATTTAATCCATTATTGTTATCCACATATATGATTAAAATTATTTATCTGATGATGATTACAGATTTTAGCTGCATACATTGGGAGAATATTTTTTTTTTCATTCCTTTCTGTTCCCTAAAAGTAAAAAAAAGTGCTATCCAAGTGCAGTGTATTTTGGAATTCTACAGCAATTGAGTATTTAGCTCAATTATAAGTTGACTTCTCAGAACATCTTTATTTATGATGATAACTAAAGTTGATTAATATGGATACTTGTCTCATTATAACACACTGCTTATTTATAAATATATAATTTAGATATTATTTCCAAGCATACAATTCTAAAAATCACAAAGCAAACTCTACAAGCACTGGTGTTTAATTATTTACATTATATTTATACACTCATATGTTTTTTTTAATATATAATAAGCAAATATCCAAGATATATATTCTTAGTAGATGTCATTGCACTCATGAACTAAGAAAAATAAGTTAAAAAGAACCTAAAACACAGAGTGTTGAAAGTCTTTAGCAAGGAGATTGATGAATAAAGAGACGAAGATGATGTTAGATAGAAAGGAAATGGAGGAGGTTCACGTTCACGTTCACCAAACTGGAATGATTAAGAAAGGTGTGTTGGCTTTAAGCTAAGTTATGGCAGCCTCCACAAAGATGCTGCTGCTACTGCTAAAAGCAAGTAAAGTAGTGAAAAGGTTAAGTCTGAAATACTGTGCATCCGTCACCATTGATCGTCTCATCCTCTGCCATTTGTCTCTCTCTCACTCACTGCATGTATATAGAAATAATAATAATATTTTTGGTTTAGAATGAGAGAAGAGAATTTAACAGCAATTGTTTGTCTCTCTAGAAGATGATTCAGCTGATGAATAAGGAAAACCATTTGATGATGGTACTTTTATATCTCCTAGGTATGAAGAACAAAGGATGGCTCTAAGAGGAACCTATAATTTACACTTTCCCTACCAAGTACTTCAATCTTTACTATTTAAATCACCTTCTTTAATTACCTTCTTCTTCTTCCTCTTTCTCTTTCTCTCATGCTCTGACCCAGATGAGTCTAACTTTTAAGAGTTGCGGTAGACTCGGATCCTGTCCCCTCTCCTCAAATAATAATAATAAGTTACTAAAACAATCAACGTCGGTTTCGTCCTTCACAATTAATACTCATCTCTTATTACTGCACACTCTTTTTTTTTTTCATCTTTTTTATCTCATTTCTTCATTGTAAAAATACCTCATAACTATGTCCAATTCATTACAGTCACGTAGAGTTCAAGAATAAACAATTTTTTACATATTTTGCAAGAGTAAAGTGAGTTTTAATGCTTACTGATTCATTATTTCTTTTTGTATAATTTAGTAATATATATATTTTGAAGGTCTGTTTATTATTTTTGTATTAGGTAATGAGGGAGTAACGTGGCTGGCTGCCGTCAAATTTGTGAAAGATTAAATAGAGGGTGAAAAAGGTAAATGAAAAATAGATAAAAAGTGTTGCTTGT


Gene Sequence:
>Vu_30569(+)
TTGTGTGATAGAACCAAGCGAGACCCTTCTCTCATCCCTTCTGTGTCTTCTGTACACTTTGTTTTGCTTTTCCTTTATTCCTTTTCTCTCTCACTGTCTTCTGTGAACATGGGTGACCCATATGGGTTGCCGGAGGATCTCCGGCGTTTTATACCACCCAGAACCCATATGAACCCTTCAAGCACGCACCTACTTGAGCCACTGTGTCTTCACCATGGTCTCAGTCCGGTTGCTGCTGCCACTACAATTCCACCCAACACCTATGACCACAACATGGTTGGGGACGTTTTCTTCCCTCGTGCCTTCACTCACTTTGCCCATCATCATGACTATTCCTCTTCTTCTGGTGTCAACCCTACCAATGCTGCCACTGCTGCTGTCTCGGATCATGCATTCTGCAGCATGGAGAGTGCAGAGAAAGGGTGGTTCGGTTTTGATTCCGGGAACAACAGGTGGCCAAGACAGGAGACCCTTTCGCTTCTAGAGATCAGATCTCGTCTTGATTGCAAGTTCAGAGAGAATAATCAGAAAGCACCCTTGTGGAATGAGATTTCTAGGTATATGTATATACTAACTTCTGAAAAAAAGGAAGAAAACCACTGTTTTTGCTTTCTGGTTTGTTTTCAGACTCAGAACGAGTTGGGGAAATGCATAGTGTGATTGATGAGTGAGGAGTGAAGAAATATGGTTGTTCTTTCTGTCTTTTCCTTTTATCTTGCTGGTTTACAATTTTTGGGGGGGTGGGAGGCTAATTTCCTCTTTGCATTTGAAAATGACAGGCCATTACTTACAGATAACTGAGAGATCCATGTGGCTTTGTTATCTATTTCTAGTTTTGTCCAAGAAATCCACTGACTCAATGTGTATACTTGCACTGGTTTTTCTGTGAGTAAGTAATTATGGGTGCAAGGATTTTCAGCACCCTGAAAGCCTGTCTTTGTTTTTAGTACTATTAGACCTAGCTAGCTACTTTGCTCAGCTAGTTAACTTAGGGCTATATATTGGAGTTTATTTTCTTGATTGAACTCGGATAATTGTATTGATGTTTCTGACATCTTTAATGAAGAGAGAATGTTTCTATTATTTTAATCCTTCAGCGGTTAATATACAATATACAAAGAAGATAGAATGATAAACATAAGAACGCTTATTAACGGAGAAATCTTAAATCTTAAATGGATTTAATATTACACGAATGTTAATTCCATGCATTCCTGAAAAAGAAATATTTATGTGATGTTACGTTTTGTTATTAGTACGGTTTTTGAACCAAATAAGATTTTCCTATTACTGTCACCCAGATTTTATCCAAGATGGAAAAGGATGGGAAAAATAAAAGAGGGAATTACTAATGTGCTAACGAATCTCCACTTACATTTTTAATGTGCATGCGTGTATAGGATAATGGCTGAGGAATTTGGGTATCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACGAAGGAAGGTAAAGCCAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTTGAAGCAATATGTGGAGACCAAGCAAACACAAATCATGCCTCAACTTCAGATAAAACCCATCGTGCTGGTGCAAACAATTCGAACATTCAAACACCTACCTTCACAATTAACCAAGAACACAATGGGGATTCTGGTAATAACCCCAAGTGCTCAGAGAGCATCAGCATCTCAAACTCATCTGAATTCGAGACATCCTCGTCTGAAAACAACGAGGAGGATCTTTCAGCCATTGCATTCATGATGAGGCAGTCAAGGGAGAAGCAGAAAGCGTTGTTGGATGAAAGACAAAGTGATCAGAGGAGGTTAAGAAAAAGCTGGAGAGCAAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATCATAGAGACTCAAGATGCTTGGATGGAGAGAATGCTGAGCGTTGTTGAACAAAGAGAGCAAGAGATGTCATCTAAGGAGGAAGAAAGGAAGAGGAAAGAGTCAATGTGGTTTGACCAACAGGTGCATGAACTGTGGGCTAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCATTGATAGAGGTTGTGAGGAAACACGTTGGGATAGAACTGGAAGCAATGCCCCTGGATGAAGCTGTGGTTGAAGAAGCAGGAAATAAGAACAAGGGCCAAGGAAAGATTGAGAGCAGTGAATTTCCGTCGGAGGGTGTGGATCAAAGAAGTAGCAGTAGGTGGACAGAAATGGAGATTTCAAATTTGATACAGCTAAGGAGTGGTTTTGAGCAACGATTCAGAGAAAATGGGTACTTGGAGAATGGGCTTTGGGATGAAATATCAGCAAAACTGGGTTGTTTGGGATTTGATAGGAGTGGAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTGAGAAGGACAGTGGATGAGTGTGATGGTGGGAAAAGAAGGCCTTGGTATTTGGGACTTAAGGTGACGGATGATGATGATCTTTGACATATTCTTGTTATAACGCAGGCTTCATCAGAAAGGTTAAGTATATACCACACTTGCTTTTCAGTTCTGAGCTTTTAAAGGAAACTTTGTGAATGGCTCATTGATTAGGATTAATTAGCAAGTTTTAATCATTCGCAAATCACAAGCTATTCTAGGCCATGTTTTTAACTTTATATTTAGTGTAACGTATGAGGACTCATGCTTCAGTGTAAGCATTCACCTTCTTCATTAATTTTGAGTTTTATCCATGCATGCATC