Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30519 LG8 37947534 37948553 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to organic substance, cell differentiation, cellular response to organic substance, plant organ morphogenesis, plant organ morphogenesis
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
C/T 37947634 missense_variant p.Pro34Leu
T/G 37947637 missense_variant p.Phe35Cys
C/A 37947640 missense_variant p.Ser36Tyr
A/T 37947668 missense_variant p.Glu45Asp
A/C 37947674 missense_variant p.Glu47Asp
G/A 37948062 missense_variant p.Val177Ile
T/C 37948112 synonymous_variant p.Asp193Asp
A/T 37948244 missense_variant p.Gln237His
A/T 37948454 missense_variant p.Gln307His
G/C 37948462 missense_variant p.Gly310Ala
G/A 37948466 synonymous_variant p.Gln311Gln
A/G,* 37948487 synonymous_variant p.Gln318Gln
G/A 37948493 synonymous_variant p.Gln320Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30519.1
MEAPEELSLGGSKDHANIVKGKRTKRVRPQSPIPFSVTANSSTGEGEREDCCNVDDNTNNKNYDINNNNIIVNNINNNNSPTTSSAGLQDSTDEEEDMANCLILLAQGQSRESPKHVEEDVGMNYAKYSSRKFLEAATLGSSRAGYYVYECKTCNRTFPSFQALGGHRASHKKLKAVVPIPQEKKHQHLLSSDEDDFQLKPNNKSPFSLQLGTKASLYNKSKVHECSICGAEFTSGQALGGHMRRHRAPVGIPTTLSFTPLTLEPEEDHPRKKRNVLNLELDLNLPAPEDDQRESKFSFASKQQQQQQHGQKQQQQQQQQQQPQTSLVLTAPALVDCHY*


CDS Sequence:
>Vu_30519.1
ATGGAAGCACCAGAGGAACTCTCTCTGGGGGGGTCCAAAGATCACGCCAACATTGTCAAGGGGAAAAGAACCAAAAGGGTCAGACCACAATCCCCTATCCCCTTCTCTGTCACCGCCAATTCCTCCACCGGAGAAGGAGAAAGAGAAGATTGCTGCAATGTTGATGACAACACCAACAACAAAAATTATGATATTAATAATAACAACATCATCGTCAACAACATCAACAACAACAACTCTCCCACCACTTCCTCTGCAGGATTACAAGACAGCACGGATGAAGAGGAGGACATGGCCAATTGCCTCATCCTTCTGGCACAAGGACAATCTCGGGAATCTCCAAAACATGTCGAGGAAGATGTGGGAATGAACTACGCCAAGTACAGCAGTAGGAAATTCTTGGAGGCGGCCACCTTGGGGTCTAGCAGGGCAGGGTACTATGTTTATGAATGCAAGACGTGTAACAGAACTTTCCCTTCTTTTCAAGCACTCGGAGGCCACAGGGCCAGTCACAAGAAGCTTAAGGCAGTCGTGCCCATTCCCCAAGAGAAGAAGCACCAACACCTTTTGTCATCGGATGAGGACGACTTTCAATTGAAGCCCAACAATAAATCACCGTTTTCCCTTCAACTCGGTACAAAGGCCAGTTTGTACAACAAATCCAAGGTGCACGAGTGCTCCATCTGTGGTGCTGAATTCACATCGGGGCAAGCACTGGGAGGCCACATGAGACGCCACCGCGCACCGGTTGGGATCCCCACCACACTCTCCTTCACCCCATTGACTCTGGAACCGGAAGAAGATCACCCCAGAAAGAAAAGGAATGTCTTGAACTTGGAATTGGATCTCAATCTTCCCGCCCCAGAAGATGATCAAAGAGAATCCAAGTTTTCCTTTGCATCCAAGCAACAACAACAACAACAACATGGACAGAAACAACAGCAGCAGCAGCAACAACAGCAACAACCACAAACAAGTCTTGTCTTAACTGCCCCAGCTTTGGTGGATTGTCATTACTGA


Promoter Sequence:
>Vu_30519::LG8:37945534-37947534(+)
AACTTTCTCAAAATAGAGTCAGATTTATAGTTCACAATTATAAATTTCTTCAATTTTTACGTGATATGCATCTTCATTAAACATAATATTTAATTATGTATATCATGTAAAATTTAATAAGAGTTATATCTAATAATTTCTATATAGGAAGACACTTAAAAAAATCATGTCCTTACCAATCGGTAGAATGATAAACTTATTCATTTAATTATTAACTACACTGATGAACTACATATGTGAAAATTTCATTTTTTTTTAAATCGCTTAATTAACACAATGAGAACAATACAAGTTTAGTCTGTTATAAAACAACTTTTAACTTTCTAGAATATGTTTGGTACAAAAAGAAAATAAAAAATGGAAAAAATAAAAGGTATATGTCATATTCTTTTTGATCGAAGAAAAAAAGAGGGTTAACTTTTAAAATTATTTTGTTCTTTATTATCACATAAACCCTTATGATCGATAATAAGATTTGCGTCAATCTATCTGCACGCAGGCTAAAGCAAAGCAAATGCGAGGAAGTTGTGTTGAACATGTCTAGAAAGATGCTTTTTTTCCTGTCTCCTCTTTTTTATTCAACAAGAATATTTTACACTTGAAGATTATTTTCATTGGAAAAATTAAAAAGTTTTAGGATAATTAATTTAAAATCGTATCATAATAATTTATAATTACTTGAAAGTATAAAAAAGTTTACAGTTGTCAAAGATATAAGATAGAAAAATTAGAGAGAAAAAAATGACAGTGAGTTAACTGAACTGAGGTCACATCAAACATGTGTTTCGGCCTATGTAGTATAAAAGTTTGAGCGACAGAATTTTGGAAAGTACGGGAAAAAGAGGGGTGAGATATATAGTTGCAGTTACAGTACAGTTAGAGTTGGTGTTGTTTTTTGATGATGTTGTTTTACCAGAATTGAGGCAGAAAAGAGAAGAAGAGAGAGTGGGAAACACAAGAAGTCCATGGAATGTGTGGTGATGCAGGCATGACAGAATGCAAAAAGCATCAGAAGAGACTGATATAAATAAAAAGTTGAGTGAAGGGAGCACCGCAGATTCCGTGGTTCCAGGCTTGCACTCCAATCATCTCGTGCACAAATCCTTCTTCCAAAGTAATACCTTATTATTATTTTTTTCTTTCACTTTTTCACTCTCTCCCAAATCTATTCGTCTCTCCAACAAAACTGAAGCAAGGATATCAGAACTTGGATTCATTCTGTGATGTTTCGTTTGTTCAGAATTGAGAGAGAACGGTGCAAGTTACAAGATAGTAAAGGTTTGTGTGGTTTAGATCTCGAAAGCTGGATTATAAATAGTATAGTGTTAATTAAAAACATTTTAAAAAAATGATTAAAACTAAAAAAGGGGATGTTTGATGAGAATTAGAGACGATGTTATGAAAGCAGTGTGATGAGATAAGATAAGATAAGATTGGTAAATGGTAAATAGTAAATAGTGAGAGTAGGGAGTCAATGAAATTTAAGAATGAAAGAATGAATAAAGAGAGGTGATAAAGAGGATGCTAATATTGTGCCACCAAGGTTTGGTTGGGGTAGTTTTTGATTTCGTGAAGTGCGTTGGCAAAGTGTAAGAAAGAGAACCAGTGTTTTCCCTCGTCTTCCAATCTCTTCACCCTTCACCACACTCTCCAAATTTGGTCACTTTCTGTTAAATTACATTATCTTTGGTCTATCCTTTTCTTGAGTGCTATATTCTCTCTTTTTCTTTTCTAAATTTTCCTATATTTACTATCCTATAAATAAACAGTTCCAAAACTTGGGTTGCAGGGCTGATTCACAGTTACTGTTGTATTGGGTGGCTTTTGACTCCCCCGACTTATTATATCCTTCACTCCTAATCTATATTTAAGAACCAACCTCCACTCTTCTTTCTCTGCTTCCTTACAACCCTCCAACCCTCTCTTTCTCTTTCTCTCTCTCTCTATTTGTTTTTTAAGGTTAGGCTTAGCCCTCTCTTCGGTTGTGTCAGGAAGAAACA


Gene Sequence:
>Vu_30519(+)
ATGGAAGCACCAGAGGAACTCTCTCTGGGGGGGTCCAAAGATCACGCCAACATTGTCAAGGGGAAAAGAACCAAAAGGGTCAGACCACAATCCCCTATCCCCTTCTCTGTCACCGCCAATTCCTCCACCGGAGAAGGAGAAAGAGAAGATTGCTGCAATGTTGATGACAACACCAACAACAAAAATTATGATATTAATAATAACAACATCATCGTCAACAACATCAACAACAACAACTCTCCCACCACTTCCTCTGCAGGATTACAAGACAGCACGGATGAAGAGGAGGACATGGCCAATTGCCTCATCCTTCTGGCACAAGGACAATCTCGGGAATCTCCAAAACATGTCGAGGAAGATGTGGGAATGAACTACGCCAAGTACAGCAGTAGGAAATTCTTGGAGGCGGCCACCTTGGGGTCTAGCAGGGCAGGGTACTATGTTTATGAATGCAAGACGTGTAACAGAACTTTCCCTTCTTTTCAAGCACTCGGAGGCCACAGGGCCAGTCACAAGAAGCTTAAGGCAGTCGTGCCCATTCCCCAAGAGAAGAAGCACCAACACCTTTTGTCATCGGATGAGGACGACTTTCAATTGAAGCCCAACAATAAATCACCGTTTTCCCTTCAACTCGGTACAAAGGCCAGTTTGTACAACAAATCCAAGGTGCACGAGTGCTCCATCTGTGGTGCTGAATTCACATCGGGGCAAGCACTGGGAGGCCACATGAGACGCCACCGCGCACCGGTTGGGATCCCCACCACACTCTCCTTCACCCCATTGACTCTGGAACCGGAAGAAGATCACCCCAGAAAGAAAAGGAATGTCTTGAACTTGGAATTGGATCTCAATCTTCCCGCCCCAGAAGATGATCAAAGAGAATCCAAGTTTTCCTTTGCATCCAAGCAACAACAACAACAACAACATGGACAGAAACAACAGCAGCAGCAGCAACAACAGCAACAACCACAAACAAGTCTTGTCTTAACTGCCCCAGCTTTGGTGGATTGTCATTACTGA