Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30459 LG8 37391586 37392524 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, sequence-specific DNA binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 37391627 synonymous_variant p.Val14Val
G/T 37391633 missense_variant p.Glu16Asp
G/A 37391794 intron_variant
C/T 37391865 missense_variant p.Pro68Ser
A/T 37391960 intron_variant
C/T 37391972 intron_variant
C/T,* 37391996 intron_variant
C/T 37391997 intron_variant
G/A 37391998 intron_variant
T/G 37392015 intron_variant
G/A,* 37392019 intron_variant
T/C 37392131 missense_variant p.Leu130Pro
G/A 37392194 missense_variant p.Ser151Asn
A/G 37392523 splice_region_variant&synonymous_variant p.???261???

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30459.1
MYWGVMAGNMGWGVIEEQGWRKGPWTAEEDRLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIIQELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPSDAAEKARIRSSRRQQFQQQQLQLKHQQQVQQQQQFQFNLDIKGIINLLEENDHRVPSTSQETQEMVNMCPNTSEQQGYFYSMFNVSDNVSAPESSNEEILWDGLWNLDDVLCNFNAASATSKTSLHNLVTPFS*


CDS Sequence:
>Vu_30459.1
ATGTATTGGGGAGTTATGGCAGGCAACATGGGATGGGGTGTGATAGAGGAACAAGGATGGAGGAAGGGTCCTTGGACTGCTGAAGAAGACAGATTGCTCATTCAGTATGTCAGATTGCATGGTGAAGGCAGATGGAACTCTGTTGCAAGACTTGCAGGACTGAAAAGAAATGGAAAGAGCTGCAGACTGAGATGGGTGAATTACCTGAGACCAGACCTAAAGAAGGGTCAGATAACACCACAGGAAGAAAGCATAATTCAGGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGGAGCTTGCCAGGAAGAACTGACAATGAGATCAAGAACTATTGGAGGACCCATTTCAAGAAAAAGGCTAAAAGCCCTTCTGATGCTGCTGAGAAGGCTAGAATCCGTTCCTCAAGGAGGCAGCAATTTCAACAGCAACAACTGCAGTTGAAGCATCAGCAGCAGGTTCAGCAGCAGCAGCAATTCCAATTCAACTTGGACATAAAAGGGATCATAAACTTGCTTGAAGAAAATGATCACAGAGTCCCTTCTACATCTCAAGAGACACAAGAAATGGTTAACATGTGTCCAAACACTTCAGAGCAGCAGGGTTACTTCTACTCTATGTTCAATGTCAGTGACAATGTCTCTGCACCAGAGTCCTCAAACGAAGAAATTCTCTGGGATGGACTGTGGAACTTGGACGATGTTCTTTGCAATTTCAATGCAGCAAGTGCTACAAGCAAAACTAGTTTACACAATTTAGTCACTCCTTTCAGTTAA


Promoter Sequence:
>Vu_30459::LG8:37389586-37391586(+)
GTTAATATTATATATGAATCTGAATTTATGTATCTTTTGTGAATCATTTCTTAATAAACTCATAAAATCTTTTATAAATTGAATTAAAATGGTATCAAAGTCTATATCTTTTTATTTATTGACTCTCACCTTTAAAATTTAAGTTTTCATTAAGCTAAAGTAACGGAATTATAAAAAAACAAAAAGATGAATTTATTTTCATTTTCTTTCACTAATAATATATTAAGATGGAATTCGGTAAATATCTCAAAGAAAAAAAGAAAAGTATTAGTCAAAAATAAAACTTTTATACGAGTAATATAAGATATATAACTTGTACAAATTTTTCTTCATAAAAAATGCCTATAAACTAAACATAGTTTGATTCTATAGAAACAAGTGGCGACTAATTTAGCTCAAACCTCACGTGTGAAATTTAACATCAATATGTTCAAAATCAATTGTGTTTTTTTCTTCTCTACCAAAGAAAACAAAATGGAAAATTCACATGTCCAGCATCAGTTCACGAAGCACCATGGTTGGAATTTAAAAAGACGAAAAAAAAACACCAGCTGTCCCAAGATGACGTTGGACACCATCATATCCATAATATTTAATTGGCCCCAATACCCAAAAATGGTATCTAATTAAATAATATTTTAATGAAAAATCAGAATTATCTGTATTGATCCCCGAAAGAGGCAAACAGTCCAACACCTGGGGAATGCCCATTGGGGATCTTGTACTTTTCACTTTAAAAAAACATCACTAACGTTAATATTTTATGTTTCATTCCTTAGATTATGCTTCTTAAACAGTAATTTTGTGTCCAGATCCATCACCCTACTTAACACGTGTCACCACAACAACTAAAAAATTTAATTTCTCTTTTATTTTATCTTCGCCAAGCTTGTCACCTAATAGTTTAACATAATGTTGAATTTTCTAATATACCCTTCTCTTGTATGTTATTCCATGATTGGCTGATTGCAATTTTCCAAGCTCTTTCAGCGGCTCAAGATTTTGTTGGTGAGGAAGTCGATTTTTCTTAGGCAATCACGTTTCAAACCCCAAACACTCACTAATATCAACCTGACGTAAATAATAAACCCCAAGGGTATTTTCGTCAGTTACCAAGATTTTACCTACACGTTGTTTTTCAATTTACATAACTTATATAAAACCAGTTTCTTATAATTGGAACTATAATTCAATATGTATAGTGAATAATAAATATATCACACTTTGCCTTCAAATAATATAAGGAGCTAATATTTTTCATAGTGCGTTTTGGCCTTATAAAATGAATGTTTTCTTTTTCTTTTTCTTTTAACTCGGATTAGGCTTGTATAAATACAATTAATTTCATTGTAACAAGTATATATTAATTTATTAAATATTGTCATTCCTAAAATTTCTACTCTTGGACATCAAACTATTTTATAGTAAAATCACATATAATGGAGAAATGTGCAATGAATTTATCTTCTCTAAGAAATCATGATGATGCTCCGATTGTTTTTTAAATTTTAAGTGCGAAATTTATCAATGTAAAAATATAAAAATGATGATTAAATTATATTAAACTTCATTTCATCTAACCTATAATAATAAATAGTTATATTATTTAGTGTTAATTATTAAAGCAAATTATTTATCATTGATCCAAACACTCACTTATGTTTGAATTGTTTTCTTTTTAAGAGAGTATATTTTATCTTCAAACTTATTTCACAAGAATACTTAAACAAACGTGATCATTGATAACAATTTTATTAAACTAGAGCATGTGATTTCTTGTAAAAAAAAATGTTGTCTTTTCCCTCTAGACAGCATAACCGTGTCTCTAACAGTGACATGGACAGGGATTACAAGAAAATAACATTGGTTGACTGACATAATGAAGTTGAGGTCCAGCTGCAGGTATAAATATGCAGCAAACATTGAACACAAATCAGTAGCACAGAATTTACAACACAAAAACTTTCCCAAAAGACAACAACTTTAGAAGACTTTTTGTA


Gene Sequence:
>Vu_30459(+)
ATGTATTGGGGAGTTATGGCAGGCAACATGGGATGGGGTGTGATAGAGGAACAAGGATGGAGGAAGGGTCCTTGGACTGCTGAAGAAGACAGATTGCTCATTCAGTATGTCAGATTGCATGGTGAAGGCAGATGGAACTCTGTTGCAAGACTTGCAGGTCCCTACTAAATTTTTCTTTTTTATCAGCAAATGTACTTGTTAGTGTTTTGTCTTTACACCTATTCTCTGAACAGGACTGAAAAGAAATGGAAAGAGCTGCAGACTGAGATGGGTGAATTACCTGAGACCAGACCTAAAGAAGGGTCAGATAACACCACAGGAAGAAAGCATAATTCAGGAGCTGCATGCTAGGTGGGGAAACAGGTAATTTTTGAAGGTTTTCTCAGCTTGTATATATGTTTATGATAAAACCGTGTGAAGCTAAATCAATAACGTTTCAGGTGGTCAACAATTGCAAGGAGCTTGCCAGGAAGAACTGACAATGAGATCAAGAACTATTGGAGGACCCATTTCAAGAAAAAGGCTAAAAGCCCTTCTGATGCTGCTGAGAAGGCTAGAATCCGTTCCTCAAGGAGGCAGCAATTTCAACAGCAACAACTGCAGTTGAAGCATCAGCAGCAGGTTCAGCAGCAGCAGCAATTCCAATTCAACTTGGACATAAAAGGGATCATAAACTTGCTTGAAGAAAATGATCACAGAGTCCCTTCTACATCTCAAGAGACACAAGAAATGGTTAACATGTGTCCAAACACTTCAGAGCAGCAGGGTTACTTCTACTCTATGTTCAATGTCAGTGACAATGTCTCTGCACCAGAGTCCTCAAACGAAGAAATTCTCTGGGATGGACTGTGGAACTTGGACGATGTTCTTTGCAATTTCAATGCAGCAAGTGCTACAAGCAAAACTAGTTTACACAATTTAGTCACTCCTTTCAGTTAA