Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_30415	LG8	36980535	36980975	hypothetical protein	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
T/C	36980555	missense_variant	p.Lys141Glu
A/T	36980572	missense_variant	p.Leu135His
T/A	36980636	stop_gained	p.Arg114*

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_30415.1

MDEEGSRGKTKDEPGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGPFAILNFPEEYPMTAGGATNAATHSSVASSSSSSSSRHANVEARGRSDQGRQVFEFEYLDDKLLEELLDFEDKKKRGP*

CDS Sequence:
>Vu_30415.1

ATGGATGAGGAAGGATCAAGGGGAAAAACCAAGGACGAGCCTGGAGATGTCCGTTACCGGGGAGTTCGCCGGCGGCCCTGGGGGAAGTTCGCCGCGGAGATTCGAGACTCCACCAGGCAAGGCCAAAGGGTGTGGCTGGGAACTTTCAACACGGCGGAGGAAGCAGCCAGAGCCTATGATAGAGCTGCTTATGCCATGAGAGGTCCATTCGCAATCCTGAACTTCCCTGAGGAGTACCCTATGACTGCTGGTGGTGCCACTAATGCCGCCACTCATTCCTCTGTTGCTTCGTCGTCCTCTTCCTCTTCCTCCAGGCATGCAAATGTGGAAGCCAGAGGAAGAAGTGACCAAGGAAGACAAGTGTTTGAGTTCGAGTACTTAGACGACAAATTGTTGGAGGAGCTTCTAGACTTTGAAGACAAAAAGAAAAGGGGCCCCTGA

Promoter Sequence:
>Vu_30415::LG8:36980975-36982975(-)

TATATGTATATATGATTTATGGTCTAAGATATTTCATGATAGATATTACAGTTTCCATCACCTTCCCCAACTCAAATGATTTTTTGGCCTTCACCCACACTTCTGCTCTAAATGCAGACTCAACAAATGTGTTCTGAGTTCCATAAATGTTAGTCATGGAGGTTTGTTCGAGATACCCTCCCTCCAGTACTAGACATTTGACTTTCATCATTACCATAATCACATAACCATTTATGGTAATATCCGTACTTTTATATATATTTCTATTTATCAGACTCGCTGAAGAAAACATATTTTTAATAAAGAAAAATTTGAAAAAAAGAAAAACATATATTTTTAATGAAGGAAATTTTGAAAAAAAAAACATTTTGCTTCTAGTTTACCTTCTTTATGTTTTATCCAAGAACACACCACTCCAATATTTCAATATACAAATAAATTTTAAAATTTAAAAGTTATTAAAAAGAACTTTATTAAGTTTAAAATAAATTTGAAATTAAAATTGAAGGCAAATGTTACCCTGATATCTCAGCATTGTTTGAAAGCAAAAGGAATGGTGTCGAGCCCAATTTTGTAGATCATGCCAAAAAATTGTGGCCAATCACTTTATTGGGCCTATATCCGTATTGTAAGCTATGTGGTAAGAATGAGATTCGAGTCTATGTGAGTCCACTCGATAAATTCATATATACATTTTAAGATTAGTGCCATTTATCGACAACAAAATATTCTTATTTTTGCAAAAGTGACCGTCATATATATTGAACTTGTTTAGCTCCTTTTTATGCTTCAAGGACTCTAAAAAGGCTTGTTCTTATTCACTGAACACCTCTGCGAATAGTAAATTTGTTCCGAATCATATTAATCAAGATATTCACCAACTTTAGACACTTCTACTTTCCAACGTACAACATTTTGTCTTTTCCTTTAAATAAGAAATAAAAAACTCTTTTAAATTCAGTGTTAATTCTTTTTTATTCTGTTATATGGATTTGGACATATTCCAGATTATGGCCCAGGTAATTTTTAAGGTTCTTTAAATTTGGTGAAACTGCTACTGATCTCACACCCAGCACCCTGAATCAATCAATTTGAAAATAAAATCTTATTGTAATACCGATGAGTCTAACTTCATTTATACATGGTTCAATTGTTGCTCTTCTTTCATTTCAATCAATAACTTGTAAATCATATTCTGATTCTTGCACCATTTATAGAGAATCTCATTCAATCCCTACAATTACTTCCAAGAAGACAACCCAGCCTCAAGATTCCCCATCCTTATAGTGCTCTTCAACATTCATTTGCATTAAGAAATTTTAATATTAATAAATTCATAATTCTACAGTATTTTTCTAGAACCAGGTTCTTTCTAGAAGAAAAAAAAAAATCATCTTACAATAGGAAACCTAGTTCCTTCTGCAGAAAAAAAAATGTGGTGGGTACTGTGTCAGAAATTATAATTATATATGCTCTGAGATCATTAGAATATCGATTACCTAAGTAAGCATAAATAAGCAATCTGACTTCAGAAAATGGTAGCACTGAGCAACACAAGTACTAAAGACCTTGCCACGTTTGACCCTTTCAACCAAGTTGCATAAAATTGATGAAGGTGGGGTTACCTTTACTTTTAATTATTGCAATATTGGTTTCAATATTTTTGTGAGCCACAAAGTGGTATTTGTTTGCTTGTAAAATGAATTCCCGAACAACGATGGGTAAAAGGCATTTAAAAGAGATAATGCTACTTGAATGAAAAAAGAATTTCAAAACTTTGCAAAGCCACCACCTTGACCATCCAAATACAATGGACACAAAACTTTTCAACATCGGTCATTGGTTTCAATAGCAGAAACTTCTTATCGTCACGTGCCAACAATTCTCATGTGGCCTAATCAAATAAAGTCTCTGCACTATGTGTACATTTTTTCAACCGTATATAAGACCACAAATCTCCTCCTGCCTTACCATGCATGCAAAAGAACAAAAACCAAACC

Gene Sequence:

>Vu_30415(-)