Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_30414	LG8	36963897	36964325	PREDICTED: ethylene-responsive transcription factor ERF098-like	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect	Amino acid change
C/T	36963957	synonymous_variant	p.Lys123Lys
C/T	36963966	synonymous_variant	p.Leu120Leu
G/C	36964015	missense_variant	p.Thr104Ser
G/T	36964093	missense_variant	p.Ser78Tyr
C/A	36964175	stop_gained	p.Glu51*

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_30414.1

MEENQKGKQGKEEVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPSEYYSQIRGSPPYPPHLAPPSSSSSHGGGSTSSSAAYHRPVFEIPCLDDKVLEDLLGQSEEHKKKKKGE*

CDS Sequence:
>Vu_30414.1

ATGGAGGAGAACCAGAAGGGGAAGCAGGGCAAGGAAGAAGTGCGGTACCGTGGCGTGCGGCGGCGGCCTTGGGGGAAGTACGCGGCGGAGATAAGGGATCCGTCAAAGCAAGGGTCGAGGCTGTGGTTGGGGACATTTGACACCGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCGTTTAACTTGAGAGGTCATCTTGCAATTCTGAATTTTCCTAGTGAGTACTATTCTCAGATAAGGGGTTCACCACCTTATCCACCTCATTTAGCACCACCATCTTCTTCCTCTTCTCATGGTGGTGGAAGCACTTCTTCTTCTGCTGCATATCATAGGCCTGTTTTCGAGATTCCTTGTTTGGATGATAAGGTGTTGGAGGATCTTCTTGGTCAGTCAGAGGAGCACAAGAAGAAAAAGAAGGGAGAATAG

Promoter Sequence:
>Vu_30414::LG8:36964325-36966325(-)

TGCAACATTTTCACTTGAAAAAGGGAATAATCAGAACACAAACTTTATTATTAATTAAATTTAAGCAGGTCTGTTTTAATTTATCCATGTATTGAGAAGTGTTATTTCCCTAATCAATTAAGGAAATAATTTCCTTACTATAAATACATAATTATTCCATCTAATTTTCAGCTAAGTTAACAAGCAAATTTTGCTTCTTTCGGTGTCTGATACGTGACCAAGTTCCGACAATTATTTACAAAGACAAAAGTTGAATTTGGATCTGCTTGAAATAAAATATTCAATGCTATAACAGAATATGTTCATAATTCTTTGCTGAGCTGGGTAGCGGTAGCTTGTCGGATTGAGAAAAAAAAGATTATGGATACCAAGTTAAACATGTGAAGTGATCAATAAAATATATATTATGACTTTGATTGTGTCGCTCGGAGTTCTCAGTAAAATACATGTATAATGATATGAAGCATTAGAAAAAGACAAACAAAAATATTATTAATTAGATGGCCATTTAAGTCTATTCTCTCAGATAACTTTGCTTTATTTCACTTTAAAGACATTTCTCATCTAAAATAAGGTGCATTATCTTACTCTTATCATCCAAAATTTTGGACTCCTCATATGTCATGATTTTCTATCAAAAAAGCTTTCTAGTTCATTATTTATTTATAATAACAGTTAGTGTAAGAGAAGTCTTAAAATAATTAAAATGGATGGTAATTCAGACAATCCTTATAATGATACTAGCGTATAAAAAAAGTTGAGCTGAAGGTAAGTAACGCCAAGATAATTGTGGTGAGAAAATAACAACTATCAACTCAAAATTACCCCTTTAAATAATAATAATTAAAATTCTAATTTATTATATTATATAAAAAGGATTTTCTTTATATCGACATTTTTTTTAATTTTATTTGACATTTTTAAATTTTTTTTTAAATTAAATAATAAAAATCATCAACAAAATAAATGAAAACCATATATAATCAAATTGTAAAAATTATTTATATTACATTTATTTTTATAATTATAATTTTATTATTTTTTGTTATAATAAAAAAATGAACACATGGTTAAAAATAAGTAGAATAGTTATGTGATATAAGGATGAGGACGAAAATAACATAATTATCTAATTATCTCCCTAACCTATATCTTGGTATATTACGATAGTGTGTGTATATATATATAAGATTAGAATAAGATAAGTTAACAGAAAAAAATTATCCTGACGTATTGATTCCCCATTATAAATTTAAACACGATAAAACAACTTATCCTAGTAACTTGGTCAAAGAATACCAAAATAGGCAAAAGTTTGACACATGAATTTAACTGTAGCATTGCCTAGTCTCTAAGTAAACAAAGATAACACTATGAATTTGAATGCAAGTTGATGACAAAGTTGAAGATATAGTATTGAATTCAATTTTTGTTTTCCTTTGGATTTAAATAATAGAAGGCACTATTCAATAGTACATACATTATTTTTAGTATAGTTAGTTGAGTCTCGTCAATCTGTGGAAGCATAATGTTGTCTCCACCCCAATCAGATACACCTTCACGAAAAAGTGTTGTGAATAAAAACATAAATCCAGTGTTCCTAATGGATCCAACTATACATGCATAGTGGCAGAAAATCTATGATTCTCGCTTAAAATGTATGAAATAAGACTTTGCCAAGTTGCAAATTGATGAGAAAAATTTGCACCATCTCCACATAAAAACATCGACATACTCGAAGAATCGAATTTATACACTTCTATTTCAAATACAGAACCTTCTTCGAAACAAATCTTGGTCAATGTACGTTCCTAGATTGAGATAGAGAACAAATCATTATTTTCCTCAGATTTGACACTTTTTCACGCACACACTATTTATATAAGCATCTGAGGCATTCACAAACCTCACCGTACAAACTCACCACCCAGTAACGCTAACAACTACCTAGCTAGGTCAAAATAGAAAAATTCACGACGATTAAGTCCAAGAAGAAGAAC

Gene Sequence:

>Vu_30414(-)