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Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

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Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30175 LG8 34428858 34431443 PREDICTED: receptor-like protein kinase ANXUR2
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 34428933 missense_variant p.Gly26Cys
A/T 34429018 missense_variant p.Glu54Val
T/A 34429045 missense_variant p.Leu63His
C/A 34429093 missense_variant p.Pro79Gln
A/T 34429094 synonymous_variant p.Pro79Pro
G/A 34429212 missense_variant p.Val119Ile
C/T 34429292 synonymous_variant p.Leu145Leu
G/A 34429328 synonymous_variant p.Ala157Ala
C/A 34429329 missense_variant p.Pro158Thr
G/A 34429419 missense_variant p.Glu188Lys
A/T 34429429 missense_variant p.Glu191Val
G/C 34429524 missense_variant p.Gly223Arg
C/T 34429527 stop_gained p.Gln224*
G/T 34430027 synonymous_variant p.Gly390Gly
T/C 34430112 missense_variant p.Ser419Pro
A/T 34430132 missense_variant p.Lys425Asn
T/C 34430135 synonymous_variant p.His426His
A/T 34430247 missense_variant p.Thr464Ser
T/C 34430255 synonymous_variant p.Thr466Thr
G/A 34430612 synonymous_variant p.Glu585Glu
C/A 34430807 intron_variant
T/C 34431011 splice_region_variant&intron_variant
A/T 34431081 synonymous_variant p.Thr641Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30175.1
MHIRASLLLLFCFPVLLNAASSSDKGGSDSLMLSCGLDKSGAKDSDGRQWSSDEKYLSENNTLTFKASFQDPSLLSEVPYMTARIFTSKASYKFPIQGDKRYWLRLHFYPSSYNTFDPVDSYFSVTANGLKLLSNFSASVTCQALSQAYLDREYSLAPLDSDTLTVTFTPSDKHDKAFAFINGIQLIEMPELFDEAPLLGFDDQTMDTKTMHFQTMFRLNVGGQYIAPNNDSGLSRTWYDDTPYIYGSATGVTNQATKEEKIDYKTQPESIAPVDIYSTSRSMGTNKDVNMGYNLTWIFQVDPASMYLTRLHFCEYHYSKVNQIVFKIYINNRTAETAADVIGWSGGQGVPTYKDYVLYVKDQPGDDQLWLALHPANESKPEFYDALLNGVEVFKLNDTDLSGPNPQPSEMLVQHEHKSNTFHRKHETSRTFVISTAGGAAGFALVAAIVVVARRQKKKRAPGTYTGTSSWLPLYGHSHTAGTKSSGSGKSVGHSNLTAMTQGLCRYFSLHDMKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEGDEMCLVYDYMALGTMREHLYKGNKPLDLLTWKQRPALNPNLPKEQVSLAEWALYNKRKGTLEDIIDPSIKGKMNPESLTKFADTAEKCVSDNGFERPSMNDLLWNLEFALNLEKNTDGSTAPGRDEGEFSEVSLEDNRAAHYKNLSLESEKGLSQDSGNGSSAVIFSQIANPTGR*


CDS Sequence:
>Vu_30175.1
ATGCACATCCGCGCGAGTCTCTTGCTGCTCTTTTGTTTCCCCGTCTTGTTAAACGCCGCATCCTCCTCCGACAAAGGTGGCAGCGATTCCTTGATGTTGAGCTGTGGGTTGGACAAAAGCGGTGCCAAAGACAGCGACGGTAGACAATGGAGCTCCGATGAGAAGTACCTCTCAGAGAATAACACCCTCACGTTCAAAGCCTCTTTCCAAGACCCTTCGCTTTTGTCCGAGGTTCCATATATGACTGCACGAATTTTCACCAGCAAAGCATCCTACAAGTTCCCCATCCAAGGTGACAAACGTTACTGGCTCAGGCTCCATTTCTACCCCTCCTCTTACAACACCTTCGACCCCGTTGACTCTTATTTCTCCGTCACCGCAAACGGCCTCAAGCTTCTTTCCAACTTCAGCGCCTCCGTCACGTGCCAAGCCCTCTCACAGGCCTACCTCGACCGAGAGTATTCCCTTGCGCCTTTGGATTCCGACACTCTCACCGTCACCTTCACGCCCTCTGACAAGCACGATAAAGCTTTTGCTTTTATTAATGGGATTCAGCTCATCGAAATGCCTGAGTTGTTTGACGAGGCTCCCTTGTTGGGTTTCGATGACCAAACCATGGATACCAAGACTATGCATTTTCAGACCATGTTCAGGTTAAACGTTGGAGGACAATACATCGCTCCAAATAATGATTCTGGTCTATCCAGAACGTGGTACGATGATACGCCTTATATTTATGGTTCTGCCACTGGTGTCACCAACCAAGCTACCAAGGAAGAAAAAATCGACTACAAAACTCAGCCAGAGTCCATTGCTCCTGTCGATATCTACTCCACTTCCCGATCCATGGGAACCAATAAGGATGTCAACATGGGCTACAATCTCACATGGATATTCCAAGTTGACCCGGCTTCTATGTATCTTACCCGGTTGCATTTCTGCGAATATCACTATTCCAAAGTAAATCAGATTGTTTTCAAAATCTACATCAACAACCGCACAGCGGAGACTGCTGCTGATGTGATTGGGTGGTCAGGAGGTCAAGGAGTGCCAACGTACAAGGATTATGTATTATATGTGAAAGATCAACCAGGTGATGATCAACTCTGGCTTGCTTTGCACCCTGCAAATGAATCAAAGCCAGAATTTTATGACGCGTTACTCAATGGGGTGGAGGTGTTCAAGCTCAATGACACAGACCTGTCTGGTCCCAATCCCCAGCCTTCTGAAATGCTGGTTCAACATGAACACAAGTCAAATACTTTCCATAGAAAACATGAGACTAGTAGGACTTTTGTTATAAGCACTGCTGGGGGTGCTGCAGGTTTTGCCTTGGTGGCTGCAATAGTTGTTGTTGCTCGTCGGCAAAAGAAAAAGAGAGCTCCGGGGACGTACACTGGCACGTCCAGCTGGCTGCCTCTTTATGGCCATTCGCACACAGCAGGCACCAAATCCTCAGGATCAGGGAAGAGTGTGGGCCATTCCAACCTAACAGCCATGACTCAAGGATTGTGCCGCTATTTCTCCTTACATGATATGAAGCAAGCAACCAAGAATTTCGATGAATCTAACGTGATAGGGGTGGGAGGGTTTGGAAAGGTTTATAAGGGTGTTATTGATAATGGATTCAAAGTTGCAATCAAGAGATCGAACCCGCAATCAGAACAAGGAGTGAACGAGTTTCAGACAGAGATTGAGATGCTGTCCAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTTTGCGAGGAGGGTGATGAGATGTGTCTGGTTTATGACTACATGGCTCTTGGCACCATGAGGGAACACCTTTACAAGGGAAACAAGCCATTAGACCTGCTAACATGGAAGCAGAGGCCTGCTCTCAACCCTAACCTTCCGAAGGAACAGGTAAGCCTTGCGGAATGGGCATTGTACAACAAAAGAAAAGGAACCCTTGAGGACATCATTGACCCCAGCATCAAAGGGAAGATGAACCCTGAAAGTTTGACCAAGTTTGCTGATACAGCTGAGAAGTGTGTATCTGATAATGGATTCGAACGACCCTCCATGAATGACTTGTTGTGGAATCTCGAATTCGCTCTCAACTTGGAAAAAAACACAGATGGTTCAACTGCTCCAGGTCGGGACGAAGGTGAGTTCTCAGAAGTAAGCTTGGAAGACAACAGGGCAGCTCATTACAAAAACCTCAGCCTTGAAAGCGAGAAAGGGCTTAGCCAAGACTCCGGTAATGGTAGCTCTGCTGTCATCTTCTCTCAAATTGCCAATCCAACAGGACGATGA


Promoter Sequence:
>Vu_30175::LG8:34426858-34428858(+)
GAGATAAATTAAAGACTTAAAGTTTAGCTTTTTGAACTCTTGTAATCTATGTATCTTATTTAAATTAGTAGAAAGAGTCAAAAGACATAACTCAAATAAAATTTGATTTTTCATAAAAACCACCATGATAATTGATTAATCACTATTGATAATCGATTATTCAAATGAAATACACTTTCTCACAAAAGACTTCGTGATAATATATTATCTACTTCTCTTAATTGATTATCACATCGAGAAAATGTTTTTAAAAATTTATGTGATAGATTATCAACAGTAACTTAACTCTTCAAAAATGACTTCTATAAATAAAGCGGTGGAGTTTCATTTAAAAACATAAAACTTAGAGAAATATGAGTATTTGAGAACTCTTTGTGGAAAGGTTTTAAAAAACATAGTGTGAATAAAGCGATAACTTTTACCAAGTGAACTATTGTGTGATTAAGTGTTGCTACTATTATTATGAGAAATTGTTCATTCTTTATGTGATTCAAATGAAGTGTTAATTCATTTTGGATTCCAATAAAGTGTTTCTTTATTTCTTGTGTGATTCAAAAGAGATGTATTTGTCTTTTGTAGAATTTTGAGATGTTCATCTCTTATGAATTTCAAGAGAGACATCTTTATATATATTTTTTAATTTTTAGGCAAGGTGAAGGAGAATGTAGTTTCTTCATTTTCATACAACAATAATTTATTGCATATCTTCTCCCATAAGTATAAATGAAAATTTCAATCATATGGACAAATTGGTAGCTTCATTTGCTTTCAAACATCGTGAAGAAAATCTTAATTACTTTCAAATCCATTTTCTTACACAATAAATTAGTAGAAGTAAAGACATGTAACAATTTATATACAAATCCAATATTTATTTATACAATACTTAACCTTTGTTCTGTTCAATTTTAGTTATAATTTATGATCTCCTGAAATTTTTTTCTTTTTTTTACCCGTTAAACTGATACTAGATTAATAATCATTGTGGCAGAAGATTTAATCATTTATTTTTTATTTAATATGCTAAATAATAATAATATTTAAACATCCAAAAAACAATCACAATTATTTGGTCTAATTTTTTACTATTTTCATTTTTGTTTACAGGTATAAAAAGTTATTTTTGTAATTCTTTTACCATGTCAAATGATTGTGAAATTATATCAAAGAACCTTTTTCCTATACTAAATATGAGTTCTCTGTCATCGTCATAATTAGACAGGATAAAAGTTGACTAATTTTGAAATTTTCTAAATATAGGTTATCATACAAAAGTTGGATCAGACGGAAAGATGTAAAGTAATTGTTCTATGTTTAAGTGGCAATACACTTGGAACGTAATACGTGGATTATCAATATTAAACTGGTATGAAAAAACAGGTTTTGTATATTATTTAATCAATCTCTTTTAATTAAAAATAAAATTATATAAAAGCAATGATTTTCTGTTGTTGGAGATTTTCTGTTGTTGGAGATCACTCCAAAATTGAATGGAAATGGAATGCTAAAAATAGCTCATAGTCGCCCTTGTAGGATTAAGAAAATGTGGCAACCCCTAAAAGATCAAATACGATTCTCACTCTCTATCGTCGGTTCCGAAGAGGGCAACGAAAAAAAAACTTCCGAAATCTGAATTCTGGAGCAAACCAGACCATAGTAACTCGTAAAGAAAATAATATTAAATAATAAAATTCAGGCCCGTGTTGTGTTTCTCTGCCTGGTTTGGTCCGGTTCCACCAATCCAGGTTTAACTTTTACACCAGCATGAACGATCCACGACGGCGATGGTGGAATAGTGTTGCAACCATCGTTTCCATCACATAGAACAAACACCAATCCAAAACCGTTTGTTGTTAGTTTCTGGCGTACAGGAAAACGGAAAAAAGCAAACCTTTTATTCACCTTTTTGGCTCCTCACTTATCACGCCACAAAGCAAAATCTTTTCCTGTACGCCTCATCCTTCATCTTCCCCTTTTCATTCAATTCCCTGCTTCAACCA


Gene Sequence:
>Vu_30175(+)
ATGCACATCCGCGCGAGTCTCTTGCTGCTCTTTTGTTTCCCCGTCTTGTTAAACGCCGCATCCTCCTCCGACAAAGGTGGCAGCGATTCCTTGATGTTGAGCTGTGGGTTGGACAAAAGCGGTGCCAAAGACAGCGACGGTAGACAATGGAGCTCCGATGAGAAGTACCTCTCAGAGAATAACACCCTCACGTTCAAAGCCTCTTTCCAAGACCCTTCGCTTTTGTCCGAGGTTCCATATATGACTGCACGAATTTTCACCAGCAAAGCATCCTACAAGTTCCCCATCCAAGGTGACAAACGTTACTGGCTCAGGCTCCATTTCTACCCCTCCTCTTACAACACCTTCGACCCCGTTGACTCTTATTTCTCCGTCACCGCAAACGGCCTCAAGCTTCTTTCCAACTTCAGCGCCTCCGTCACGTGCCAAGCCCTCTCACAGGCCTACCTCGACCGAGAGTATTCCCTTGCGCCTTTGGATTCCGACACTCTCACCGTCACCTTCACGCCCTCTGACAAGCACGATAAAGCTTTTGCTTTTATTAATGGGATTCAGCTCATCGAAATGCCTGAGTTGTTTGACGAGGCTCCCTTGTTGGGTTTCGATGACCAAACCATGGATACCAAGACTATGCATTTTCAGACCATGTTCAGGTTAAACGTTGGAGGACAATACATCGCTCCAAATAATGATTCTGGTCTATCCAGAACGTGGTACGATGATACGCCTTATATTTATGGTTCTGCCACTGGTGTCACCAACCAAGCTACCAAGGAAGAAAAAATCGACTACAAAACTCAGCCAGAGTCCATTGCTCCTGTCGATATCTACTCCACTTCCCGATCCATGGGAACCAATAAGGATGTCAACATGGGCTACAATCTCACATGGATATTCCAAGTTGACCCGGCTTCTATGTATCTTACCCGGTTGCATTTCTGCGAATATCACTATTCCAAAGTAAATCAGATTGTTTTCAAAATCTACATCAACAACCGCACAGCGGAGACTGCTGCTGATGTGATTGGGTGGTCAGGAGGTCAAGGAGTGCCAACGTACAAGGATTATGTATTATATGTGAAAGATCAACCAGGTGATGATCAACTCTGGCTTGCTTTGCACCCTGCAAATGAATCAAAGCCAGAATTTTATGACGCGTTACTCAATGGGGTGGAGGTGTTCAAGCTCAATGACACAGACCTGTCTGGTCCCAATCCCCAGCCTTCTGAAATGCTGGTTCAACATGAACACAAGTCAAATACTTTCCATAGAAAACATGAGACTAGTAGGACTTTTGTTATAAGCACTGCTGGGGGTGCTGCAGGTTTTGCCTTGGTGGCTGCAATAGTTGTTGTTGCTCGTCGGCAAAAGAAAAAGAGAGCTCCGGGGACGTACACTGGCACGTCCAGCTGGCTGCCTCTTTATGGCCATTCGCACACAGCAGGCACCAAATCCTCAGGATCAGGGAAGAGTGTGGGCCATTCCAACCTAACAGCCATGACTCAAGGATTGTGCCGCTATTTCTCCTTACATGATATGAAGCAAGCAACCAAGAATTTCGATGAATCTAACGTGATAGGGGTGGGAGGGTTTGGAAAGGTTTATAAGGGTGTTATTGATAATGGATTCAAAGTTGCAATCAAGAGATCGAACCCGCAATCAGAACAAGGAGTGAACGAGTTTCAGACAGAGATTGAGATGCTGTCCAAGTTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTTTGCGAGGAGGGTGATGAGATGTGTCTGGTTTATGACTACATGGCTCTTGGCACCATGAGGGAACACCTTTACAAGGGAAACAAGCCATTAGACCTGCTAACATGGAAGCAGAGGTTGGAGATCTGCATAGGAGCTGCAAGAGGCCTTCACTACCTTCACACTGGAGCAAAATACACCATCATTCACAGAGATGTCAAAACAACCAACATTCTCCTTGATGAAAACTGGGTTGCCAAGGTTTCAGATTTTGGACTGTCCAAAACAGGTCCAAACATGAATCAAGGTCATATTAGTACAGTGGTGAAGGGTAGCTTTGGATACTTGGATCCCGAATATTTCAGGAGGCAACAGTTGACTGAGAAGTCTGATGTGTACTCGTTTGGGGTGGTGCTGTTTGAGGCCCTTTGTGCAAGGCCTGCTCTCAACCCTAACCTTCCGAAGGAACAGGTAAGCCTTGCGGAATGGGCATTGTACAACAAAAGAAAAGGAACCCTTGAGGACATCATTGACCCCAGCATCAAAGGGAAGATGAACCCTGAAAGTTTGACCAAGTTTGCTGATACAGCTGAGAAGTGTGTATCTGATAATGGATTCGAACGACCCTCCATGAATGACTTGTTGTGGAATCTCGAATTCGCTCTCAACTTGGAAAAAAACACAGATGGTTCAACTGCTCCAGGTCGGGACGAAGGTGAGTTCTCAGAAGTAAGCTTGGAAGACAACAGGGCAGCTCATTACAAAAACCTCAGCCTTGAAAGCGAGAAAGGGCTTAGCCAAGACTCCGGTAATGGTAGCTCTGCTGTCATCTTCTCTCAAATTGCCAATCCAACAGGACGATGA

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