Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30158 LG8 34260487 34263108 PREDICTED: trihelix transcription factor GTL2-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
T/C 34260495 5_prime_UTR_variant
G/A 34260503 5_prime_UTR_variant
G/T 34260504 5_prime_UTR_variant
C/A 34260717 missense_variant p.Pro26His
G/A 34260725 missense_variant p.Ala29Thr
C/T 34260851 stop_gained p.Gln71*
C/A 34260921 missense_variant p.Pro94His
T/C 34261034 splice_region_variant&intron_variant
C/G 34261142 upstream_gene_variant
C/A 34261198 upstream_gene_variant
A/T 34261208 upstream_gene_variant
T/C 34261387 upstream_gene_variant
A/G 34261470 synonymous_variant p.Glu148Glu
C/T 34261914 synonymous_variant p.Leu296Leu
C/A 34261925 missense_variant p.Ala300Asp
T/A 34262054 missense_variant p.Ile343Asn
G/T 34262400 missense_variant p.Lys458Asn
A/G 34262416 missense_variant p.Arg464Gly
G/A 34262465 missense_variant p.Arg480Lys
A/G 34262471 missense_variant p.Lys482Arg
A/G 34262484 synonymous_variant p.Glu486Glu
T/A 34262490 synonymous_variant p.Ile488Ile
C/G 34262535 synonymous_variant p.Ser503Ser
A/T 34262891 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30158.1
MFDGVPEQFHQFITPRTSLPLHLPFPLHASGTPNTTFPSNFDPYNPHQLPLQPNTLLHPLHHPPPTHKDEQDKEQNTAVSMNFQIQRDQGHQLPQLIHPWTNDEVLSLLRIRSSMESWFPELTWEHVSRKLAELGYKRSAEKCKEKFEEESRYFNNNINYGKNNNNYRFLSELEQLYHQGGADHLGTQEKTHQLHKQDKMDHHPLEEGDSGKLEAPVTKQNHDAAAVEKNQARKRKRPGRFEMFKGFCESIVHKMMAQQEEMHNKLLEDMMKRDEEKFTREEAWKKQEMEKMNKELEMMAREQAIAGDRQTNIIQILNKFSVTPASNKSLKVVTNGSNLKSHITQNPNPSENIPATPATENPTSSVAQDTLQLIANPSTSSSSAQVPQPNPSSSSLNSQNNINPIERNSVLNKSLSSNVGEKDDVGRRWPKDEVLALINLRCSSVSNNGSNEEKEGNKVPLWERISQGMSELGYRRSAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSSLYNEGKLVLQFERPESHTDNPPENLEQVQADQTRAESSSQVGSGGFSVQQQVDHGGEKTLMQVPSLDFDQF*


CDS Sequence:
>Vu_30158.1
ATGTTCGATGGAGTACCTGAGCAGTTCCACCAATTCATAACTCCAAGGACCTCACTGCCTCTTCACTTACCTTTCCCTCTCCATGCTTCTGGCACTCCCAATACCACCTTCCCTTCCAATTTTGATCCTTACAACCCTCATCAGCTGCCACTCCAACCCAACACTCTCTTGCACCCGTTACACCATCCACCCCCTACCCACAAAGATGAACAAGACAAGGAACAAAACACCGCTGTCTCAATGAACTTCCAAATCCAAAGAGATCAAGGTCACCAACTTCCCCAGCTCATTCATCCCTGGACTAACGACGAAGTCCTTTCTCTCTTGAGGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAACTCACTTGGGAACACGTTTCCAGGAAGCTGGCAGAGCTTGGATATAAAAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAAAGTAGATACTTCAACAACAACATTAATTACGGCAAGAATAACAACAATTATCGGTTTCTCAGTGAGCTCGAACAGCTTTACCATCAAGGGGGTGCCGATCATCTCGGGACCCAAGAAAAGACTCACCAACTACACAAACAAGACAAGATGGACCACCATCCATTGGAAGAAGGGGATTCTGGAAAACTCGAGGCACCCGTGACAAAACAAAACCACGATGCAGCAGCTGTGGAAAAGAACCAGGCACGCAAGAGAAAGAGGCCCGGTAGGTTTGAAATGTTCAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGCGCAGCAAGAAGAGATGCACAACAAGCTCCTCGAGGACATGATGAAGAGAGACGAAGAGAAGTTCACTCGAGAGGAAGCTTGGAAGAAGCAAGAGATGGAGAAGATGAACAAGGAGCTCGAGATGATGGCTCGTGAGCAGGCCATTGCAGGTGATAGACAGACCAACATTATTCAAATACTGAACAAATTCTCGGTCACTCCTGCATCGAACAAGAGCCTCAAGGTAGTAACTAATGGCTCAAACCTAAAATCTCACATTACCCAAAACCCTAATCCTTCAGAAAACATCCCAGCTACACCCGCAACAGAAAACCCTACCTCGAGTGTTGCACAAGACACATTACAACTGATTGCCAATCCTTCTACTTCTTCCTCTTCGGCTCAAGTTCCTCAACCCAACCCTAGTTCTTCCTCTCTAAATAGCCAGAATAACATAAACCCAATAGAGAGAAATTCGGTTTTGAATAAAAGCTTGTCATCAAACGTTGGCGAGAAAGACGATGTTGGGAGAAGGTGGCCAAAGGACGAAGTGTTGGCACTGATAAACCTGAGGTGCAGCAGTGTGAGCAACAACGGCAGCAATGAGGAGAAGGAAGGGAACAAGGTGCCTCTGTGGGAGAGAATCTCACAAGGGATGTCGGAATTAGGATACAGGAGGAGTGCAAAGAGGTGCAAAGAGAAGTGGGAAAACATTAACAAGTACTTCAGAAAAACCAAGGATGTCAATAAGAAGAGGTCCCTCGACTCAAGGACTTGTCCCTACTTTCATCAATTGAGCAGTCTCTATAATGAAGGAAAACTGGTTCTACAATTCGAACGGCCAGAAAGCCACACGGATAATCCACCTGAGAATCTGGAGCAAGTGCAAGCGGATCAAACACGAGCCGAGTCTTCTTCTCAAGTGGGGTCTGGTGGTTTCAGCGTGCAGCAGCAGGTTGATCATGGAGGTGAGAAAACCTTGATGCAAGTACCTTCTTTGGATTTTGATCAGTTTTAA


Promoter Sequence:
>Vu_30158::LG8:34258487-34260487(+)
TTTCAGTGTTATGATCATATAATGCAAAATCACTTCGGAATTCAGGTTTTTTATCTTTAAAGACACTTTACTAAACATATTAGCGAAGATTTGCAAATATATTAAAGACAATCAGTACTTTTTTTTATGAAGTTCTTATTAACATTTAACAGACAAGTTTGAGAACCACAATGATTAATGTGTGTTGGTGTCACCCATAGTCACATTCTGAAAATTGTTAATTAATAATTTGAAGAATTTAAAAAGGGAGAAACGTATACCTTTGAGTGCCCTTATGATTCACGAAAGGAGAGAAACTCTCGTGGAAAAGGAGTATAAGATGACCAAATAAATAGGAGTAGAACAAATAATTCGTAATTTTCAATAAGATTTATGTCTGAGAGTAACGTTATAGAATTTGATTGTACAATATATATATTTAAATAAAGTAGCAATAAACAAATTAAAATACGACTATTTAAACCATTTCTTATTACGTAATCGCTCTTCAACAAATTTTATTGTTGATTTGGACAAAACCTTTTTTTTTTTTAATTACGAAGAGTTTATTAGATATGTGATATTTTGGGAGTGTAGAATTTGCATTGTATTTACTGTGTTCACACCACCAAGATAAAGTTGTACTTTGTGTTACTTAAGTGTCGAGGTGTACTTGCAAAAATAAAAGAAGCCCACGAAGACGACCCGTTTATGTTTGGGTAAGTTCGGCCCACAATGGGCTCTAGGTTTTTTAATAATTAAGATAAAATTTGAAGGTTGAAGGAGAAGAGAGAAAAGGTTTTGAAAATAAAAATAAATGCAGCGGAAAGCATGGCCAATAGGTGAAAACTGGCAGCTATAGAGAGGTACGAAGGGTGGAGATTGAAGCAATCTAATGAGAAGGAGAAGTTGCTACTTATGACATATCTCTTTCCACAACTCATTCCAACCTGGTTAACCACTTACCCCACCCCCTCTTTTCTTATTTCGACCACCCCCTCGGGAGGGATGGCGGTGATAATATGATATAAAGGGAGGATTAAAATGCAAAGAAAGTGGCGGAAAGAGGAAAGTAAATGGTTGAATGTGGGGGAAATATTCTTATTGTTGGCGTTCTTAGATCCAAACTCTACATGGAATAGTAGGCCCAACATATCCATCAATAAATTGAAATATTTTGAGTGAGGCTGTACTGTAGCACTGTATCCTCTGTACCATGTGAAGATTCCCATCCTTAAATAATTGGTCCCATCCTCTGCATGTTTTCACGTGTCCTGCCATTCGGATGCCGTTAATTACACCATCATGAGCATCAGCTACTGCATAGGATTCGAGTGGCCCAGTGACAACCAAACCAAAACTATTTTTATTTTTCTTTTTTCTTTTCACTTCCATTTTCCACCTCACTCTCCCTCCACGCGCGTCCTCTCCAATCCCCAATCATGCATCCCATCATATCCTCTTCTTCAAGCAACTGCATCATCCCATACGATACAAACCTTCTCTTCTGTATACTGCTGTCAATCATTCTCCCTCAATTCGCATCTCCTTTCTCCTTCTTCTCCCTGTCTAAACTTTTTCCGCTACAAGGAATACCAACGCATCATAAAGATCACTTTGGATTTTATTTCAAAATGGGAAAAAGGCTAAAAAGCACTGAATATGCTTCTTTTTATTTCTAACGTGCTCTGATTCACCTCTTCAAGAAAACCACATTTTCACTCTTAAAATATATTAACAACTATTACAAATATATGATTTGATTAATCTCGTGATTCTTTCTTTTCAATTAACAAGCTGTTGATTGACATCATTATGACTTGATAATCCAGGGAGAGTTTTGATAATTTCTGTGCTAACCCTCCTTTTTTTTTATTATTATTATTATTATGATTATATAGAATATTGTCTGGTAGCTAGGGGTGTGAGTTCACTTTCTTCCAAAAGGGTGTGGTGGTGGGCTATGATTTCTCTTGCATGCAAGGACAAATTCTTTGATAAATGTGAGAGAGAAAGAAAGA


Gene Sequence:
>Vu_30158(+)
ACAGAAAATAGAGAGAGGGAGAGAGAAAGTGAGGTTGGTGCGTGGTTTGTAAGTTGGTTGTAGGCTATTGCTGATTTTAATTTACAGTGAGCACAGGAAAGAAGAGGTAAAGAAGAGAGAAGTAGTAGTGTCAACAGAAAACAGAAACAGAAACATGTTCGATGGAGTACCTGAGCAGTTCCACCAATTCATAACTCCAAGGACCTCACTGCCTCTTCACTTACCTTTCCCTCTCCATGCTTCTGGCACTCCCAATACCACCTTCCCTTCCAATTTTGATCCTTACAACCCTCATCAGCTGCCACTCCAACCCAACACTCTCTTGCACCCGTTACACCATCCACCCCCTACCCACAAAGATGAACAAGACAAGGAACAAAACACCGCTGTCTCAATGAACTTCCAAATCCAAAGAGATCAAGGTCACCAACTTCCCCAGCTCATTCATCCCTGGACTAACGACGAAGTCCTTTCTCTCTTGAGGATCAGATCTAGCATGGAGAGTTGGTTCCCAGAACTCACTTGGGAACACGTTTCCAGGTATCGATTACTATACCTTCTTTTTTACTGTTCTTGCCTCTTCTCTACGCTCTTTTCCATCAACAATTCTCCTGCAAATCAAGGCAATAAATTCTTTAACAGAGAATTAATTACCCGCTGCACTTTGTGTTTCATCAGTGTAGTTGCATCGTGTGCGCTACCTAAAACCTTCGTGTGGTAGACAAAAGCACACGTGCACCCACACTTTAGCTCACACACTGACACCTTGACACACATAAACACTGAGCCCGAGAGGAAGGAAGGGACGAAAACTGAAGGAAGAAAGCAAAATTGTCTATTATTATACTTGTTAAAGACAAAGATGCTGTTAGATGCTTCATTCCATGGTTGGTTTTGGATTTATATAATTTATGGTGTGGGCGCAGGAAGCTGGCAGAGCTTGGATATAAAAGGAGTGCAGAGAAGTGCAAGGAGAAGTTTGAAGAAGAAAGTAGATACTTCAACAACAACATTAATTACGGCAAGAATAACAACAATTATCGGTTTCTCAGTGAGCTCGAACAGCTTTACCATCAAGGGGGTGCCGATCATCTCGGGACCCAAGAAAAGACTCACCAACTACACAAACAAGACAAGATGGACCACCATCCATTGGAAGAAGGGGATTCTGGAAAACTCGAGGCACCCGTGACAAAACAAAACCACGATGCAGCAGCTGTGGAAAAGAACCAGGCACGCAAGAGAAAGAGGCCCGGTAGGTTTGAAATGTTCAAGGGTTTTTGTGAGAGCATTGTGCACAAGATGATGGCGCAGCAAGAAGAGATGCACAACAAGCTCCTCGAGGACATGATGAAGAGAGACGAAGAGAAGTTCACTCGAGAGGAAGCTTGGAAGAAGCAAGAGATGGAGAAGATGAACAAGGAGCTCGAGATGATGGCTCGTGAGCAGGCCATTGCAGGTGATAGACAGACCAACATTATTCAAATACTGAACAAATTCTCGGTCACTCCTGCATCGAACAAGAGCCTCAAGGTAGTAACTAATGGCTCAAACCTAAAATCTCACATTACCCAAAACCCTAATCCTTCAGAAAACATCCCAGCTACACCCGCAACAGAAAACCCTACCTCGAGTGTTGCACAAGACACATTACAACTGATTGCCAATCCTTCTACTTCTTCCTCTTCGGCTCAAGTTCCTCAACCCAACCCTAGTTCTTCCTCTCTAAATAGCCAGAATAACATAAACCCAATAGAGAGAAATTCGGTTTTGAATAAAAGCTTGTCATCAAACGTTGGCGAGAAAGACGATGTTGGGAGAAGGTGGCCAAAGGACGAAGTGTTGGCACTGATAAACCTGAGGTGCAGCAGTGTGAGCAACAACGGCAGCAATGAGGAGAAGGAAGGGAACAAGGTGCCTCTGTGGGAGAGAATCTCACAAGGGATGTCGGAATTAGGATACAGGAGGAGTGCAAAGAGGTGCAAAGAGAAGTGGGAAAACATTAACAAGTACTTCAGAAAAACCAAGGATGTCAATAAGAAGAGGTCCCTCGACTCAAGGACTTGTCCCTACTTTCATCAATTGAGCAGTCTCTATAATGAAGGAAAACTGGTTCTACAATTCGAACGGCCAGAAAGCCACACGGATAATCCACCTGAGAATCTGGAGCAAGTGCAAGCGGATCAAACACGAGCCGAGTCTTCTTCTCAAGTGGGGTCTGGTGGTTTCAGCGTGCAGCAGCAGGTTGATCATGGAGGTGAGAAAACCTTGATGCAAGTACCTTCTTTGGATTTTGATCAGTTTTAATTCATTGATTTGTCCAGGCACAAAATAATAACGAGTACCAACTCTTTTGTAACTCTGTGTTTTTGTTTTTTTGGTTGATGATGGCTTTCTTTAATATATATTTATATATATAGCATATAAAATTGATTATTGTATATTAGAAAAGCTTAGAATCTGGGTGGCACCGACAGCTATAGGTAGTTTGAGGAATGAGAACAATTAATATTCCTATTCCTGTGTAAGTGTGATATTTATGATGTATTTTACTTTATGTTAGTGAGGGGAATGAATAGATGTTTGATATTTGTTTTAATGGGGGAAGACATTGACCCTGTT