Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29936 LG8 32154893 32156379 PREDICTED: transcription factor MYB86-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 32155064 missense_variant p.Arg343Lys
C/G 32155067 missense_variant p.Arg342Pro
C/T 32155549 synonymous_variant p.Arg181Arg
G/A 32155554 missense_variant p.Pro180Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29936.1
MGRHSCCYKHKLRKGLWSPEEDEKLLDYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEENMIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRSIDPNTHKPLSEVEKDKDMLPSTDKTNQKASLGSNEVSLVDHPAKALPSSERYPLEVSTSSTQELFLDRFGATCHDNSCRPSDVVGPYFSFHHFNYGTTNMGLSANPNASLSFVPPSTSSDLNNSTISSSMLHSIFPTHVKLQSNDNPSISSDAVQNWESNNTNKSNASMQFQSSTDFLENTWGVAESAKVNINKDAQVPLQTEQEDLKWSEYLNTPFILGNTPENQIQTSQSIYSEVKPETGFITDESCTSWHHPPPAFQLSDIYSKNLQRFSVTFGQTL*


CDS Sequence:
>Vu_29936.1
ATGGGAAGACACTCTTGTTGCTACAAACACAAGTTACGGAAAGGCCTTTGGTCTCCTGAGGAAGATGAGAAGCTTCTGGATTACATCACCAAACATGGTCATGGATGTTGGAGTTCAGTCCCCAAACTTGCTGGTCTGCAGAGGTGTGGGAAGAGTTGTAGGTTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAGAGAGGAGCATTCTCGCAGGAGGAGGAGAACATGATCATTGAACTCCATGCAGTCCTTGGAAACAGGTGGTCTCAGATTGCAGCACAGTTACCGGGAAGAACTGACAATGAGATTAAAAACTTATGGAACTCGTGCCTGAAGAAGAAGCTGAGGCAAAGAAGCATTGACCCAAACACCCACAAACCACTCTCTGAGGTTGAGAAGGACAAGGACATGCTACCCTCAACCGACAAAACCAATCAGAAAGCCTCATTGGGATCCAATGAAGTGAGTTTGGTTGATCACCCAGCAAAAGCCTTGCCTTCTTCAGAGAGATACCCTCTTGAAGTTTCCACCAGTTCAACCCAGGAACTATTCCTAGATAGGTTTGGTGCTACCTGCCATGACAACAGTTGCAGGCCCTCTGATGTGGTAGGACCATACTTCTCCTTCCATCACTTCAACTATGGAACAACAAACATGGGCCTCTCTGCAAACCCCAACGCATCTCTTTCCTTCGTTCCACCCTCCACCTCTTCAGACCTTAACAATTCCACCATATCCTCCTCTATGCTGCATTCGATTTTCCCAACACACGTGAAGCTCCAATCTAACGACAACCCTTCCATATCCTCTGATGCGGTTCAAAACTGGGAATCCAACAACACAAACAAAAGCAATGCCAGTATGCAGTTTCAAAGCAGCACAGACTTCCTTGAAAACACGTGGGGGGTGGCTGAGTCTGCAAAGGTTAACATTAACAAAGATGCTCAAGTGCCCCTTCAGACAGAACAAGAGGATCTAAAATGGTCCGAGTATCTTAACACCCCATTTATTCTGGGAAACACACCGGAGAATCAAATCCAAACCTCTCAATCTATCTACAGTGAGGTCAAACCAGAAACAGGATTCATAACAGACGAGTCATGTACTAGTTGGCACCATCCGCCACCAGCTTTTCAACTTTCCGATATATATAGTAAGAATCTGCAGAGATTTTCAGTGACTTTTGGACAAACCCTTTAA


Promoter Sequence:
>Vu_29936::LG8:32156379-32158379(-)
TACTGAATTTAATAATTCGTGATGACAATTAAAAATTAAAAAATTGTATGGACTCGTACTTAAAAAATGTTCCATATTATTGAAACATATTTACTTAATTTAAAAGAGTAATTATAATTATACTCATAATAATTCAACGCAACTAAAAATTGATTGTTAAACTCCAACAGTATTGTATATGTAAACAAAATTACTACTTAATAAACTAAGAGATTTGAAGTACAAAATTATTATTTGAAATAAAAAGTTATATACTATAATATTCGGCTAATTTTTACTATATTTTATAAAAGACAGAATCTACATATATACAGCGTGAAGTTTATAAAAATATATTAACTTACTAAATGGACTTAATGGTACAAATTTTGACAGTACTGATATGATCTAATATAAATTTGTTTTGAAGAACTAAAAACTGAACGTAGTAACAAAAGTTTCATTCATCCAAAGATTTGGTGCAGTTAGTGAATATTTGATCATAGAAAATTGTCTGCTTTCTTATATATATATATTTACATGAGAGGCAGAGAGGCAGAGATGCAAACTACGATGAATAGGGACAATTGCATTATTGTGATTGTCGCATTTGAATGTGGAAGTACAGTTGTTTATTTCTATTATTAACTTTGGTTTTAGTATCCTACCTAAAAAAACAACGGTTTTAGTATCTTACCACACAAACACAGAAGTCGTATGAAGTCAGAAAATTGACATTCAAGAAAACCACAATTAATTCACAACGTACGTAATTTTCAAATTGCAAAAAAGATGAATCATTAGGATGGTTAGTTGAAGTTCCAGCAATTTCTAAGGGAGGAAAAATGACCTTAACCCGGACAGATGTCAAAAGCAATTTTGCATTTGTTCCCAAATGATGAAACTTGTCCAAACGATCATGGTTTTGAAAAACCATCCCAAAAAACCAAAGGAGGATAAGAAGGCCAGTTTTTTCTGCATAGGGTACCTGGCTGCCAGAAAAAAAGTTAGTCAAGAAAAGGAAAGAGCCATAGAGTTTTCAATTTTTTTAGTGTAATTACCAAAGGGCAACAAAAGAACCTAGAGAAGCTTCTGTTATCATCAATTTAATGCAGTGTATATTGTTTGCTACTCTCAGGAATTACTTGTCTACTAGAATTTTTCCCTTCTCAAATCATGTGCTTAATTTATACTTTATGTTTCTATTCTTGGACTAGATTTAGCCTGGCAGACACACTCCTTCAATTTCCTTACATACTTTTCATTTATTTATCACTCTCTTTTCTTGATATCATGTGAGAATGGTGACGTTTCGTCACACTTGAGAAGTTTCAAACACACCAGACTATACAATTTGGAACTCCCAGCTCTAAGCAGCATGGTCCATAACCACCTAGGTCGGTGAAAAGTAAGAACCCTCTTAGCTAGCTTCGTAGCATATGGCAATTACCAAAAGTTGGTACATACAGTCACATGAAGATCAGAACTTTTGTGTGTTAAAATTTTGAGATCTCTTGAGAAAATGCCAATGGGACATATACATACATACATACATAGGTAAAAACGAAACTTAGTAATAATTATGATGTGTGTTACTCTGTTGTCGTATACATACATCAGTGGATAGAAAGCGTGGAAGAATGAAGACCGTCGAAACATGATGACCCAGATGGTGGGGCCAAAGATTGTCCCGTGAAGAAGGGTGGTGTGAGGTGCCCAGTTGAGGAAAGTCAGAAATGAATTAAAAAAAGGAAAATGGTTTGGCAGTGTCCAATCAGCTCTTGGTACAACTTTCTCCTCTCAAAGGCTCCTCCTATTTATTTGATTCCCTGTCATGCTGCCATTTTATTTTCTCACTTTCCTTGTCTCACCATAATAATAACCCTTTTTAACTCAAACCTTCATAACTCTTCCCCTCACCCCACCAAAACACCCTTTACTTTCCTAGCCATTCATTCTTCCTCCACGTACGTTTCCACAAAAACCATTGCTGGATTCAACACTTCCTCACTCACGTACAC


Gene Sequence:
>Vu_29936(-)
ATGGGAAGACACTCTTGTTGCTACAAACACAAGTTACGGAAAGGCCTTTGGTCTCCTGAGGAAGATGAGAAGCTTCTGGATTACATCACCAAACATGGTCATGGATGTTGGAGTTCAGTCCCCAAACTTGCTGGTATATCTACATATATACATATATAGTACTATATCGTTTGTTTGCTCTCAAATTTCAACACTTCGTTGATGTAGTGTGCACAATGAATGACTAGAGACAGTAGACAAGAGAGTCATTCTAATCTTAATTCTGCATGCCAGGTCTGCAGAGGTGTGGGAAGAGTTGTAGGTTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAGAGAGGAGCATTCTCGCAGGAGGAGGAGAACATGATCATTGAACTCCATGCAGTCCTTGGAAACAGGTAGTTTAGTATATAGTTAAATATCTCACAGGGCCTTTTTTTTCTCTTTCTTTTTTAACGTATAGTTATTACTTTTGACTTTTGTTCTTGTATATGTATGTTTTACTGTTTCTCATGTGGTTTGCTCGGTGACTGCTTTATCAGGTGGTCTCAGATTGCAGCACAGTTACCGGGAAGAACTGACAATGAGATTAAAAACTTATGGAACTCGTGCCTGAAGAAGAAGCTGAGGCAAAGAAGCATTGACCCAAACACCCACAAACCACTCTCTGAGGTTGAGAAGGACAAGGACATGCTACCCTCAACCGACAAAACCAATCAGAAAGCCTCATTGGGATCCAATGAAGTGAGTTTGGTTGATCACCCAGCAAAAGCCTTGCCTTCTTCAGAGAGATACCCTCTTGAAGTTTCCACCAGTTCAACCCAGGAACTATTCCTAGATAGGTTTGGTGCTACCTGCCATGACAACAGTTGCAGGCCCTCTGATGTGGTAGGACCATACTTCTCCTTCCATCACTTCAACTATGGAACAACAAACATGGGCCTCTCTGCAAACCCCAACGCATCTCTTTCCTTCGTTCCACCCTCCACCTCTTCAGACCTTAACAATTCCACCATATCCTCCTCTATGCTGCATTCGATTTTCCCAACACACGTGAAGCTCCAATCTAACGACAACCCTTCCATATCCTCTGATGCGGTTCAAAACTGGGAATCCAACAACACAAACAAAAGCAATGCCAGTATGCAGTTTCAAAGCAGCACAGACTTCCTTGAAAACACGTGGGGGGTGGCTGAGTCTGCAAAGGTTAACATTAACAAAGATGCTCAAGTGCCCCTTCAGACAGAACAAGAGGATCTAAAATGGTCCGAGTATCTTAACACCCCATTTATTCTGGGAAACACACCGGAGAATCAAATCCAAACCTCTCAATCTATCTACAGTGAGGTCAAACCAGAAACAGGATTCATAACAGACGAGTCATGTACTAGTTGGCACCATCCGCCACCAGCTTTTCAACTTTCCGATATATATAGTAAGAATCTGCAGAGATTTTCAGTGACTTTTGGACAAACCCTTTAA