Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29861 LG8 31200798 31202861 PREDICTED: probable WRKY transcription factor 23
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 31201014 missense_variant p.Ser30Leu
T/C 31201255 synonymous_variant p.Asp110Asp
A/C 31201276 missense_variant p.Glu117Asp
G/T 31201375 intron_variant
G/T 31201531 intron_variant
A/T 31201762 intron_variant
T/A 31201767 intron_variant
C/T 31201770 intron_variant
A/G 31201776 intron_variant
C/A 31202080 intron_variant
C/A 31202085 intron_variant
T/C 31202091 intron_variant
G/A 31202425 synonymous_variant p.Gln258Gln
A/G 31202469 missense_variant p.Tyr273Cys
G/T 31202474 missense_variant p.Asp275Tyr
G/A 31202517 missense_variant p.Arg289Gln
A/G 31202689 3_prime_UTR_variant
A/G 31202790 3_prime_UTR_variant
A/G 31202822 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29861.1
MEKKEMVVKTEDAVGSSSFPCYNSNVYPFSNTFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTVSVPHHSTVKAPPDNGKECSEVLNHQPATPNSSSISSASSDAVNDEQNKTLEQVEEDDDEEEEGQQKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVPAGYATNFTSVFPQAGNYLSHYQQQHQQQQLIFNTLSSLGFPYNDSSTPKNAGFTQERRLCNSGTNAFLRDHGLLQDVVPSHMLKEE*


CDS Sequence:
>Vu_29861.1
ATGGAGAAGAAGGAGATGGTTGTGAAGACTGAGGATGCGGTTGGGTCCTCTTCCTTCCCTTGTTATAATTCAAACGTTTATCCATTCTCGAACACCTTTGATTTCTCTGAGGTGGAAAAGAGCTCTTTAGGGTTTATGGAGCTACTGGGTGTGCAGGATTACAGTCCTCTGCTTGAGTTGCCTCAACTTTCAACCGTTTCTGTGCCTCATCACTCTACAGTTAAGGCTCCACCTGATAACGGAAAAGAGTGTTCCGAGGTGTTGAACCACCAACCCGCCACTCCGAACTCTTCTTCTATTTCATCTGCATCCAGTGATGCTGTCAATGATGAACAGAATAAGACTCTAGAACAAGTTGAAGAAGATGACGATGAAGAAGAAGAAGGACAACAAAAGACTAAGAAACAGTTGAAGCCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGGAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCTTTTCCCAGGAGTTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGCGTGGAACGATCTTTCACTGATCCAAGCGTGGTAGTCACAACCTACGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGCTCAGGCGTCCCCGCTGGATACGCTACCAACTTTACTTCAGTTTTTCCACAAGCAGGAAACTACTTATCCCACTATCAGCAGCAGCACCAACAGCAACAACTTATTTTCAACACATTGTCCTCTTTGGGTTTCCCTTACAATGATTCTTCCACTCCAAAGAACGCGGGTTTTACTCAAGAGAGACGGCTTTGTAATTCGGGGACGAATGCATTTCTAAGGGACCATGGACTTCTTCAAGATGTTGTTCCCTCACACATGTTGAAAGAAGAGTAG


Promoter Sequence:
>Vu_29861::LG8:31198798-31200798(+)
TCGGTCTAACTAAGGTGTTATAAATTCAAAACAATGTCTGCCAGCAATATAGAAAGAAAATGAAAATCTTTACAAGCTCAGCAAACTATGAGGAAATGTATATTAAAAATTAAGACAAGATTTCCTATCCGAAACCTTCAAAATTAGAAGTCAAATTTGAATTTTGCATCATAAATCATTGTATACAATAATTATAGAAGGAATAGGAAATAGGGAATAGTATAGTAGGGACCATGTGAAGTTAATTAAATTTATAAGGGATGAAGGAAGTTGATTTTTCTGCGGGCATGCATCCAGAAGAATAGGTGACGTACAACAAGGTACATCCCTAACAGATCTTCAACATTCACAGAAGCTATTCATTCCAGAAAACTCCAACAACTTATTTATTGTTACTAAAACGCACTCTAAGTATACGGTACTGTCTCAACAGAGTGATGAGAAACATAATGGAGAAAAATATAAAGGAGCTCTCAGCCTTCAAAACTTTATCATGGTTTTTCTCTATTCCTTCATTTGTAAACATACATTCATGCCCATATCTTCAAAATGAGAGAAGAACAAATTCTAATTATTGAGACGCATGCTGGATAGCAGTCAAGTACTTTCACTCGGAAACCATATGTCAGCATGCTTCTCGTGGTCGTGGCTCACTTAAAACCACACGTGCAACCTTTTTCCATTCTCTTCTCATCACATAATAAAACACTCCCTTCCACATCTTCTTATGCTACTTTTTTTTTTCTTTTTTCTTATGCAGTTTCTCTCTTCTTTTTTGCTTTCAAACTCTAATCCCCGTACAAAAAAAATCAACAATAAAGGATGCAAGTTGAAGAACATTTTTAGTAAGGGTTTTATAGTTTTGCCTGTAAAAAAATTACATCCACCGACAACACATGGGTGTGCTGACTTTCTTAGAGATATTCACACAACTTAAGGTTTGTGGCTCCGAATCCTTTATGTGTGACTTCCTCCGTCAGATATGGTCGGATGTGAGATTTAGCAACAAAAGTTTTTATGAATATTATTATCTTACACTCAACTATAACCGGATCAGTTTCTTTCCGATTTATACACCAAATCCAAATCAACCAAACCCAAACCTTCCATCAGCAATGAGGTATATTCTCATTGGAACACTCACTGTGGTACAATTCCCTGTTTAACCATAAACGAATCATATAAGTATATTTCTCTCTCTATATGAATGGATGAACAATAATAATCCCCTGTTTGCTAGTTTTCCTCACTCTACTTCTTTTAACTATTGTCTTTATACACCAAACAAAATACAACATGTAGTAAATAGGGTTGCCCTTTTCATTTACGAGAACTTGCTTTTTTGGGAATTTCAAATGTTGATTTCACAAGAGTCAAGAGGAGGAAATTAGGCTCACTGATTTAATCAATTTATTTAAGGATTTAAGATTAGTTTTGTTTAGCCATGTCGCGCCATCTATTTTTTTATGACTTTTTTCCTAACCTATTCGCGAATCCCTGTGCTACGTTGGTTTGTAAGACAAGTTGGCGTAATATCAAAACCCGCTGCAAAAGCTTCACAAAGTGAAAGAAAAAATAATAATGAAAAAGGTAGGTTGCAAAAGAGAAAAAGAAAACTAAAGAATTAAGAAAACGACGATAAACTTTGAAGGATTGATCAGATTTCGTAGATCACTTGCACACGAGTGAACACTATTATTACAATTTGGCATTTTTAGAAACGAGGGAGAGTAAAAAAAAATCATTTAACGCCGTTAGAATCTAGGAGATGACGGAACCCCTTTCACACACATCCTAAACCGGTTAAGGGGTCAAATGCTACGTATGAAAGCGTCGACCATGGCATGCATTGATTGCCACCGGCTCAGCGTTGTCCTTACCAGTCCATGACCTACACTTGCCGGTCAAATCTCGCCTTCATTTCTATCTTTGTTCCTTCCACACCGTTTTCACTTTCTTCTAAATCCAAAAGTACTCACAAACTTTCTCTCTCTCTTTCA


Gene Sequence:
>Vu_29861(+)
ACACACACCTAAGCTATAAACCAGATCAACCCTACCTCTCTCCACTTCTCACTAGTGTTAAGTTCGAGTTTGTGGCGTGTGAGAGATGAAGGATTTGAGCATTTGAGAGATCAACGCGTTTGGTATATATGGAGAAGAAGGAGATGGTTGTGAAGACTGAGGATGCGGTTGGGTCCTCTTCCTTCCCTTGTTATAATTCAAACGTTTATCCATTCTCGAACACCTTTGATTTCTCTGAGGTGGAAAAGAGCTCTTTAGGGTTTATGGAGCTACTGGGTGTGCAGGATTACAGTCCTCTGCTTGAGTTGCCTCAACTTTCAACCGTTTCTGTGCCTCATCACTCTACAGTTAAGGCTCCACCTGATAACGGAAAAGAGTGTTCCGAGGTGTTGAACCACCAACCCGCCACTCCGAACTCTTCTTCTATTTCATCTGCATCCAGTGATGCTGTCAATGATGAACAGAATAAGACTCTAGAACAAGTTGAAGAAGATGACGATGAAGAAGAAGAAGGACAACAAAAGACTAAGAAACAGTGGGTTTTTTCCTATTTATCTCATCACTTTTTCTTTTCTCGGGGATTACTGGAATTTTTTTTTTCTAGTGAAAGGATTACTGATATATATGGTGGATTTTTTTTTTGGCTTTGTGCAAGTATTCAGTGTTTTTTTATTAAGACTGCGGTATCTTCTCACGGAAGACTACCTTAGTCTAGTATAGCTTTTGTTTTCATGTTTTGTGGTTGTTGGGGCGGGGCGGTGAAGCTTTGGCTTTAAAAAGTTAATTTTAGAAATGAATGGTTGATGGGATGTGAAGAACACACAATTTGGGATGGTCTCTCTAGTATAAAGTACGTGTTTTTATATGTTGTTTGGGTTTAATATGTATAGCAAGGGAGAAGGTGTTTGACGATCCAATTAGATAAAGTAACGAGATCATGGGGTACATTTTGTTTTGTTAAGTTATGTTTTGCTTTTGAGATAAAATAAGAATACATGTGATGTGGTTGATGTGAGGAAGGTTCTAAGATTTGATGGTTTCTGGGATCTGGTTCTTATTGGGTTTAGGTTGAAGCCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGGAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCTTTTCCCAGGTAACATCCGATTTAATTCTCCCGGTAAACTCTAATCTCAAGTCTTACAGTGCCTGCACCTACCTACTTTTCCTTCCTTCCCTACTTTATCTTAATTCGTTTAATTCACTCACAAGTTACACCAAACAAATTAATTAATTAATTAATTAAATAGCCTTAACATTTGGAATATACTATGTGTGGATCACATGTAGGAGTTACTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACGCGTGGAACGATCTTTCACTGATCCAAGCGTGGTAGTCACAACCTACGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGCTCAGGCGTCCCCGCTGGATACGCTACCAACTTTACTTCAGTTTTTCCACAAGCAGGAAACTACTTATCCCACTATCAGCAGCAGCACCAACAGCAACAACTTATTTTCAACACATTGTCCTCTTTGGGTTTCCCTTACAATGATTCTTCCACTCCAAAGAACGCGGGTTTTACTCAAGAGAGACGGCTTTGTAATTCGGGGACGAATGCATTTCTAAGGGACCATGGACTTCTTCAAGATGTTGTTCCCTCACACATGTTGAAAGAAGAGTAGAGATGATAACTCCATTACTCATGCTTCTATGTGGTTTATTTTTTGCTGACTTTTTCCTATGAGAGTTAGGTGAGAACTCTAGTAATGGTACATGTAATTTTTCTTCCTGACCGATGGTAATATTAGTGATCATGATGATATATATACTTGTAAAACCCAGTTTATAGCTTTTTGCACATAGCCCATCGATCATTACTATGTCTGTATAACAAGATGAATTATGATCTAATGCAGGGACTACTCCTAGTTGTAGTTT