Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_29832 LG8 30895434 30899567 PREDICTED: probable receptor-like protein kinase At5g47070
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/A 30895636 3_prime_UTR_variant
C/A 30895679 3_prime_UTR_variant
T/A 30896054 missense_variant p.Asn352Ile
C/T 30896062 synonymous_variant p.Leu349Leu
A/G 30896391 intron_variant
A/G 30896393 intron_variant
T/A 30896534 intron_variant
T/A 30896544 intron_variant
T/A 30896546 intron_variant
T/A 30896553 intron_variant
G/A 30896558 intron_variant
A/T 30896585 intron_variant
C/A 30896640 intron_variant
T/C 30896689 intron_variant
G/A 30896690 intron_variant
T/G 30896706 intron_variant
A/T 30896718 intron_variant
G/C 30896777 intron_variant
G/A 30896782 intron_variant
G/C 30896997 intron_variant
T/C 30897077 intron_variant
C/T 30897101 intron_variant
A/T 30897132 intron_variant
A/G 30897150 intron_variant
C/T 30897187 intron_variant
A/G 30897202 intron_variant
T/A 30897220 intron_variant
C/T 30897358 intron_variant
A/C 30897377 intron_variant
C/T 30897427 intron_variant
A/G 30897440 intron_variant
C/T 30897441 intron_variant
G/A 30897596 synonymous_variant p.Ala197Ala
G/T 30897623 synonymous_variant p.Leu188Leu
G/T 30897753 missense_variant p.Pro145Gln
G/T 30897754 missense_variant p.Pro145Thr
A/T 30897845 intron_variant
T/G,A 30897848 intron_variant
A/T 30897857 intron_variant
T/A 30897868 intron_variant
A/T 30898038 synonymous_variant p.Ile126Ile
G/T 30898046 synonymous_variant p.Arg124Arg
T/A 30898247 stop_gained p.Arg57*
C/T 30898554 intron_variant
G/T 30898568 intron_variant
G/A 30898587 intron_variant
A/T 30898594 intron_variant
C/T 30898598 intron_variant
T/A 30898606 intron_variant
C/A 30898625 intron_variant
T/A 30898628 intron_variant
C/G 30898633 intron_variant
G/A 30898638 intron_variant
T/C 30898642 intron_variant
A/G 30898661 intron_variant
G/A 30898671 intron_variant
G/A 30898675 intron_variant
G/A 30898676 intron_variant
C/T 30898681 intron_variant
T/C 30898684 intron_variant
G/A 30898687 intron_variant
G/A 30898701 intron_variant
C/T 30898709 intron_variant
C/A 30898711 intron_variant
C/T 30898721 intron_variant
C/T 30898722 intron_variant
G/A 30898743 intron_variant
G/C 30898751 intron_variant
T/A 30898761 intron_variant
G/T 30898773 downstream_gene_variant
A/T 30898787 downstream_gene_variant
A/T 30898796 downstream_gene_variant
T/A 30898797 downstream_gene_variant
T/C 30898810 downstream_gene_variant
A/T 30898858 downstream_gene_variant
C/T 30898864 downstream_gene_variant
C/G 30898865 downstream_gene_variant
G/C 30898871 downstream_gene_variant
T/A 30898873 downstream_gene_variant
G/A 30898877 downstream_gene_variant
G/T 30898893 downstream_gene_variant
C/A 30898906 downstream_gene_variant
A/T 30898908 downstream_gene_variant
C/T 30898909 downstream_gene_variant
A/C 30898911 downstream_gene_variant
T/G 30898922 downstream_gene_variant
C/A 30898946 downstream_gene_variant
A/T 30899015 downstream_gene_variant
A/T 30899107 5_prime_UTR_variant
G/C 30899274 5_prime_UTR_premature_start_codon_gain_variant
T/C 30899291 5_prime_UTR_variant
T/A 30899297 5_prime_UTR_premature_start_codon_gain_variant
C/T 30899464 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_29832.1
MKCFPFYFGEKKDGPKSLQSISGRSNISTTVEAEMRRSGSELNSMDASDASTDSLRRNAFPSLSQRPSNLRVFTVPELKTSTKSFSRSVMLGEGGFGCVYKGLIKSVDDPSTRIEVAVKQLGRRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLPWNRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWKAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKMLEWIRPYLSDGRKFQLILDPRLERKHLFRSAQKLAVIANKCLVRNPKNRPKMSEVLQMVTQVVESSVSTNPQQPLKGVVASEEASAETVNKKITMDQQPHCNWLRMWRPKFLSTWL*


CDS Sequence:
>Vu_29832.1
ATGAAGTGTTTTCCATTCTACTTTGGAGAGAAGAAGGATGGTCCCAAGAGCTTGCAGTCCATATCGGGTCGGTCCAACATTTCTACTACTGTTGAGGCTGAGATGAGGAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACGCCAGCACAGACTCCCTTAGGAGAAATGCATTTCCCAGCCTGTCTCAAAGACCCAGCAACCTCAGAGTATTTACTGTGCCCGAACTAAAAACATCCACAAAGAGTTTTAGTCGCTCTGTGATGCTTGGAGAGGGTGGGTTTGGGTGTGTCTACAAGGGGTTGATCAAGAGTGTTGATGATCCTTCCACAAGAATTGAAGTTGCTGTTAAACAGCTTGGCAGACGAGGAATTCAGGGGCACAAGGAATGGGTCACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCAAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAAAGGCTTCTGGTGTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCACCACGATCAGAAACTCCTCTCCCATGGAATAGGAGGTTGAAAATAGCCCAAGATGCTGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATTCTTTTGGACGAGCAGTGGAAAGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTCTCAACAGCGGTAGTTGGAACAATGGGTTATGCAGCTCCAGAGTATGTTCAAACCGGACGTCTTACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAGCTCATTACTGGTCGGCGGCCGATTGACCGAAATCGCCCCAAAGGTGAGCAGAAAATGTTGGAATGGATAAGGCCATACCTTTCAGATGGAAGGAAATTTCAATTAATATTGGATCCAAGACTTGAGAGGAAACACCTCTTCAGGTCAGCACAAAAACTTGCTGTAATAGCAAACAAATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTGTTACAAATGGTGACTCAGGTTGTGGAGTCTTCAGTGAGTACAAATCCACAGCAACCCTTGAAGGGTGTTGTAGCCTCGGAAGAAGCTTCTGCTGAAACGGTGAACAAGAAAATTACCATGGATCAACAACCACATTGTAATTGGTTAAGGATGTGGAGACCAAAGTTTTTAAGTACATGGTTGTAG


Promoter Sequence:
>Vu_29832::LG8:30899567-30901567(-)
AATTAATTATTCTAACAATTTTGAAAAATAGTTACAACATCTTTCTGATAAAATTTATTATTAAATAATATATCGATTAAATACATTACTCATTAATTGTTAAAAATAGGTTAATCGGTTGTTTAAAGATCTTAGAGTATTATAATTACGAGAGATTGAAAAATACTTAATGTGCTCTTTGGATTAATCTGTTATAAAACCAAATAATTGATTTTTTTCCTAAACAATCTCAATAACAAATTAATCAACTAAATATAAATCTAATCATTAAAAACGTAAAACAATCTTTTAGGCTTTATTTTAACTCTAAAAAACCATTTTCTTTCAAATAGGTTGTGTTAAATTAAAAATTCCTTAGTGAATACCTTATGTGAAGCACACAAACAAAATCAAAGAAAGCTAAACATCATCAAAACATCTTTATTTTCACTTGGACCTTTGAAACTCTTCTTTGAGATCATTATAACACAAATCTTTCTAAAATACTAGGGCTTATTGATTGCTTAAAGATTTCAAGAACGTACACATTAAATATCTTAAAAGTAGATAGACATGATAAAAAAAATTGTAAGTACACATTAAATAAACAATTCTCTTTCAACGCAATTTAATTTCACATATCTAAATAACATTATTAACGTTGATAGATTCAAATTGGAACTAACTTACGTTTAGAATCGGTATCATCAGCTAACATTAAAATATAAACCACTTTATTACGTGGCACATAAGTTAAACTTAAAATTTATATACCCTTTGTTTTAAAACTGTAAACTTTTAATACAAGTGGCAGATATAAAGCTCCAACTCAACACATAAAATCAAGTCTTAACTTGACCAAAAACTTTTTACATATCAAATAAACTAGTAATAAATTAAGATGCATTGTTTTGTGGAAACTGAAAAGCAATAATCCCAGACTAATTCTAATTCACCTTTGAAAACGAAATTCCAAAGGCAGAAACAGTTCTTTCATCATCCTTCAAAAATCATAATTCATGATACTGACCCGGTCAACGGTCAACATCGGTAACCTCCACGAAGGTCTTGAGAGGAGGATCCTTTGATACAACCATACAAAGCACTTATTTTCTCTTGAACTTTCTCTTTTTAACATTTTCTAGGTTCAGTTTAAAGTTTTGTTTATTTTTTAAAATTTAGAATACATCATTTTTAGCCTTTTTCAAGTAGTTTGGACAGTGTTTCATAGAAAAATAAAAATAAAGTAAACAGTGTTTCGGCGGGATTTAGAACCCTAATCCAAAACATTCAAAGTTGTCTGCTCCGATGTCCAGTTGTGTTGTCTTCACTCTTCTCCTTGTCCGAGCCGTGGGGGAGGGTGCCTGCAAAAGACATTCCGATGCTCAAGTCAGTGACTTTGCGTAATAATCTTGTAATCAAGATTTAGTTATCTGAGCTCTAAGTTTCAGTTCAAGTTCAAGTTCAAGTTACCTGTCTCCTTTGCCACACAAATATTTATAAATTATAATGAGCTTACCGTTAGGTCTGACTCATTAACCACCAATGAATGACAATATTAATTGTCAATAAATAACAATTATTTTCATTAACTCCCAGACAGTTATTACTATTAATTACCTTAACGGCTGATTTTAGCGATCGGTTCACTGACCTGAGAGGTATCATCGGTCGGGTTGATTTTACCGATCGGTTCATTGACCTGAGAGGTATCATCGGTCAGACTACTCTTCTGCACCTTTACCGTTCGATCGGCTATGAGCCCACAGTAACACAGTATTTACAAAGAGTTAAACAATACGACATTTTATATTTAAAGTGACAAAGATGTTTGAAGATCTAAAACTAAATTTAGTGTAATAAAAACATATTTTGCCTTCCTTTTTTTTTGGCAACACCTCGTCCTTTCTCGAGTCTATTAAGGTTATAAAAAGGAAAAAGGAAAAAACATGTCTTTTTCTGCCATGAACTTTGCCCTGTAACGTACAAATTGCAAAGTTTGTTTCTTATTGACTTGTTCT


Gene Sequence:
>Vu_29832(-)
ATCTACCATTTAACTTTCCACTGCAAATGAACTAACTCTACGTATACGTGTGAATCCACCAAAAAGAAATAAGAGCGAAGGCTGCGTGTATCGCCTTGACTTCGCAAACCCAATTATGCTTCTTCCCTTCACAAGAACACAACGACAACAACTTAAGCTGGCTGTGTCTGTTTCTTCTTCTTTTTCTTCAGCTCTTTATTACTTGGTCTCTCAAATACAGAAGACACGTTCACACCACACAAAGTTTGGATCTTAAACAATGCTACTGTAAGAAAAATCAATTTGTATCAATTCAGGTTGTTTGCTTGATTTGCCTTCGACCCAGCGAGTCGTGCAGAGCAGAGACTTCTGCTGGGGCCTTTCACTCTGTTCTTCTCTTTTTGGGAGCAATGGCTTAAGTAGGTCTTCCTTGTCAGAACCTGGATGCCAAACACAGAAGAAAAAAAAAAAAAGGGATTTGTGGTTTTTTTGAGTCAGAAAAGCCGACGCTTTTTGGGGTCAATTTATATCTATTTGAACTTAAGGTGAGTTTTAGAATCAAGATATGTTTTTTGGTTTTTCTTGGTAAACTAGTATGGCCTGCAATTGAACCCAAATGAAAAATGAGTTGAAAGGTATACAGGGGTTTCTATTTCCTTAAACTCCATCTTCTTAATTTGTAGACACATGCCATTCTTAGTTTTTGTTTTCCAAAAACTTTTTGGCTTGTTACCAATTCTATTTCTGTTTGGTAATTTAAAATTGGCTTACTTGAAAGATTGATTTCTAGAATAGGATTGGTTGGTTCTATGGATCATGTTGGCTAGAATTAGTTAACACAATTTCTGATGGGGTTATCTGAAATTGGAGTTGTTGGGAGGGGGATGCAGTAGTGAGTCTCCAAATGGGTTTCCCCTCTCTGAATTGTTGATGAATTAGGAAAGAAAGTGCGTTTGAAAAATTGTGGAGAAAGTAGAAAATCATGTGAGGGATGTGTCCAACAAATAACTTCTTATTAAACGTGAAAATTATATGTAGGATTTGAAAACAAACACCCTGAAACATCATGTGTGACCTTCAATTCAGATGCCATGTTACTTTTCAATGGGTATACGTTTCTTAATTTGTTGTTCAAATTTTCTGATAATGCAGTCTAGTTCAAATCAGGTAGCAATGAAGTGTTTTCCATTCTACTTTGGAGAGAAGAAGGATGGTCCCAAGAGCTTGCAGTCCATATCGGGTCGGTCCAACATTTCTACTACTGTTGAGGCTGAGATGAGGAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACGCCAGCACAGACTCCCTTAGGAGAAATGCATTTCCCAGCCTGTCTCAAAGACCCAGCAACCTCAGAGTATTTACTGTGCCCGAACTAAAAACATCCACAAAGAGTTTTAGTCGCTCTGTGATGCTTGGAGAGGGTGGGTTTGGGTGTGTCTACAAGGGGTTGATCAAGAGTGTTGATGATCCTTCCACAAGAATTGAAGTTGCTGTTAAACAGCTTGGCAGACGAGGAATTCAGGCAAGCAGTTTCCTTTTAAGTTTTCCTCTTAAGATGCCTTTTGAATTGCCGATTCAACGCTAGAGATCTCTTAGAACAATTTTCTGATAGATATTTCTGTTCAAGCACTCGTTCCACAGTTTAGGTGTTTCTGCAGTGTCAGGAGGAATATTAGTAAAATAAAATAAGGTGCATTGTTTTTCTGTAACATTTACTCTACATTAAAATATTAGCTACTTTTGGATTACAGGGGCACAAGGAATGGGTCACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCAAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAAAGGCTTCTGGTGTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTATCACCACGATCAGAAACTCCTCTCCCATGGAATAGGAGGTTGAAAATAGCCCAAGATGCTGCTCGTGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGGTATAGCCATATAGCATAACTTTACTAATAAATTAGATAATGCCTTCATTGCCTTGTGCAGAAAGTAGAAACTTAACTGTTTTGATCTCATTTAGACATTCCAGTAGAAGGAAGATGGGAACAGCTAAATTGGAATTTTGTTGAATTTTAATTTTAGGATTAAATATTTTTTTGTCCTTAAACTTAGACGTAAAATTGAAATTCATCTCTTTTCCAAACTTTCATAGATTTTGGTCCGAAACTTTAAAAATGAATGAATAGAGTCTTTTTAACTCAATAACATTAATTGTTTTGGGTTTGTTAGATGAACGTGTCAAACGGTATAACAGCTCAAACTCTAACTTGCAACGTCTTTTGGCACGTAAAAAAAATTAATACAATTGGATTAAAATGATTATATCCATTCATTTTTTAAGTTTGGGAACCAATGTATCAAAGTTTGGGATAGAGACAAATTCTAATTTCTCATATTTAACTCTTAATTTTATTTGCTATTTAAGTATATGTTGTGCTGCTTGGACTTGCCGTGGTGACTGTTATCTGTTGGCTGGTTTAGATAATTTTCAGAGATTTCAAATCTTCAAATATTCTTTTGGACGAGCAGTGGAAAGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTCTCAACAGCGGTATGGTCTTGTTTATTGATCTCATATTTCACTTACTAATATGATGTTCACATTTATGCTGAGATGTAAGAAGCAAAAGAATACGATGCCCTTTGACAAAAATCTTCAATTTCTGAAAAAATGAATTCATTTCTTATCCAATGAATTTCATAAACCCTCATGCAACGTTCCTACGCAATAAATGATGAAAATGTTGAATGTTTATATTTTCAAGATATTAAATGTGGATATAACCATGCTAATTCTTCACCAATTCAAACCTGCATTTCTTATCTTTTCATTGAATACTTTGTTAAGTACTCAGAATCAATAAGATATTATATGTGGATATATAACATTACTCAGACAATTACTCTATTTTCTGTTGACTCATGTTATATTCAACATGATCATGCTGATGAACAAATTTGCCCTTTTGTAGTTAACAGCTAAATGATTAACAAACTCATTACAAACTACATAGAGCTGGAATTTTGTGAATCAACATACAACTTATGTTCATATGGTCTGTTTATTCATCAGGTAGTTGGAACAATGGGTTATGCAGCTCCAGAGTATGTTCAAACCGGACGTCTTACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAGCTCATTACTGGTCGGCGGCCGATTGACCGAAATCGCCCCAAAGGTGAGCAGAAAATGTTGGAATGGATAAGGCCATACCTTTCAGATGGAAGGAAATTTCAATTAATATTGGATCCAAGACTTGAGAGGAAACACCTCTTCAGGTCAGCACAAAAACTTGCTGTAATAGCAAACAAATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTGTTACAAATGGTGACTCAGGTTGTGGAGTCTTCAGTGAGTACAAATCCACAGCAACCCTTGAAGGGTGTTGTAGCCTCGGAAGAAGCTTCTGCTGAAACGGTGAACAAGAAAATTACCATGGATCAACAACCACATTGTAATTGGTTAAGGATGTGGAGACCAAAGTTTTTAAGTACATGGTTGTAGCTTTATACTGAACAAGGCAAATAATTGGAGGCAAAGTTTGTTTATGACAAGAATGATTTTTTGTTCCTGTACTTGGAAACCAGAAAGAGCAGATCATGTTACTGCTATTTTTGTCACACCAAACGAAAAAATGTGCATAAACTATTTGTGCCACTTAGGGGTGCTTCAAGCGTATCAATCTATTTGATGAAGTTTTTAAGGATGCTATATTGAAGTAGGTAAGAGGAAAAGAATTGTGAATTGCAAGGTGGAGGCTGGATTTCTGTGATATGCTAGATATGTTGATGACCCTAATGTATGTAGCTGCTCTTAGAGAAGTGAAAATTAATCACTTAATGGATGTAAAATAATTCCTTTGTAAATTCTATATTTTTTTATTTGCACATTTTCTTTATAAATATGC